RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, human

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-231	ENST00000561395	LRRC45	Q96CN5	670 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	RTP4	Q96DX8	246 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	SERPINB11	Q96P15	392 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	OLFM3	Q96PB7	478 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	QKI	Q96PU8	341 aa	Known RBP eCLIP	7.75	□□□□□ -1.17	4e-9	■■■■■ 47.8
TPM1-231	ENST00000561395	HAPLN3	Q96S86	360 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	TXLNGY	Q9BZA5	131 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	TKTL2	Q9H0I9	626 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	ZBP1	Q9H171	429 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	OSBPL2	Q9H1P3	480 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	ACBD3	Q9H3P7	528 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	WDCP	Q9H6R7	721 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	TLR8	Q9NR97	1041 aa	Known RBP	7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	OLA1	Q9NTK5	396 aa	Known RBP	7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	7.75	□□□□□ -1.17	3e-7	■■■□□ 15.3
TPM1-231	ENST00000561395	DLGAP2	Q9P1A6	1054 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	FNIP2	Q9P278	1114 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	WNT16	Q9UBV4	365 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	MTRF1L	Q9UGC7	380 aa	Known RBP	7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	MFHAS1	Q9Y4C4	1052 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	HEY1	Q9Y5J3	304 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	ASPM	Q8IZT6	3477 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	ZZEF1	O43149	2961 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	CEP295	Q9C0D2	2601 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	KCNU1	A8MYU2	1149 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395		H7C0C1	242 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	DNALI1	O14645	258 aa	Predicted RBP	7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	NDC80	O14777	642 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	CREB3	O43889	395 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	LILRB3	O75022	631 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	IFNB1	P01574	187 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	ZSCAN5DP	P0CG00	497 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	RARG	P13631	454 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	ETS1	P14921	441 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	EPCAM	P16422	314 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	HOXC13	P31276	330 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	CCR1	P32246	355 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	HTR7	P34969	479 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	ATP5O	P48047	213 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	ITGA8	P53708	1063 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	TPI1	P60174	286 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	SLC10A2	Q12908	348 aa	Predicted RBP	7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	XRCC4	Q13426	336 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	PAFAH1B3	Q15102	231 aa	Known RBP	7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	TRIP4	Q15650	581 aa	Predicted RBP	7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	UAP1	Q16222	522 aa	Predicted RBP	7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	SLC45A4	Q5BKX6	768 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	ARSI	Q5FYB1	569 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	SPDYC	Q5MJ68	293 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	MANEAL	Q5VSG8	457 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	ALS2CL	Q60I27	953 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	HIBCH	Q6NVY1	386 aa	Predicted RBP	7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	TMC5	Q6UXY8	1006 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	ZC3H18	Q86VM9	953 aa	Known RBP	7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	MRPL43	Q8N983	215 aa	Known RBP	7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	FAM71D	Q8N9W8	422 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	ZNF461	Q8TAF7	563 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	AUTS2	Q8WXX7	1259 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	OVCA2	Q8WZ82	227 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	RNF34	Q969K3	372 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	SLC39A13	Q96H72	371 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	EPAS1	Q99814	870 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	C10orf88	Q9H8K7	445 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	CYP4F11	Q9HBI6	524 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	USP29	Q9HBJ7	922 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	RXFP1	Q9HBX9	757 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	MRPL17	Q9NRX2	175 aa	Known RBP	7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	DTL	Q9NZJ0	730 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	OGFR	Q9NZT2	677 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	IGSF9	Q9P2J2	1179 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	OR12D3	Q9UGF7	316 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	SFMBT1	Q9UHJ3	866 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	ANAPC5	Q9UJX4	755 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	NUDT5	Q9UKK9	219 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	MAFF	Q9ULX9	164 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	SMG5	Q9UPR3	1016 aa	Known RBP	7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	NEU3	Q9UQ49	428 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	TLR6	Q9Y2C9	796 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	SIT1	Q9Y3P8	196 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	YIPF1	Q9Y548	306 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	SNX10	Q9Y5X0	201 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	SPEG	Q15772	3267 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	ANAPC1	Q9H1A4	1944 aa		7.74	□□□□□ -1.17
TPM1-231	ENST00000561395	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	7.73	□□□□□ -1.17
TPM1-231	ENST00000561395	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	7.73	□□□□□ -1.17
TPM1-231	ENST00000561395	GOLGA6B	A6NDN3	693 aa		7.73	□□□□□ -1.17
TPM1-231	ENST00000561395	HACD1	B0YJ81	288 aa		7.73	□□□□□ -1.17
TPM1-231	ENST00000561395	TEX28	O15482	410 aa		7.73	□□□□□ -1.17
TPM1-231	ENST00000561395	KCNN4	O15554	427 aa		7.73	□□□□□ -1.17
TPM1-231	ENST00000561395	PAGE1	O75459	146 aa		7.73	□□□□□ -1.17
TPM1-231	ENST00000561395	LRIG2	O94898	1065 aa		7.73	□□□□□ -1.17
TPM1-231	ENST00000561395	MAP3K6	O95382	1288 aa		7.73	□□□□□ -1.17
TPM1-231	ENST00000561395	IGLV3-27	P01718	113 aa		7.73	□□□□□ -1.17
TPM1-231	ENST00000561395	CSH1	P0DML2	217 aa		7.73	□□□□□ -1.17
TPM1-231	ENST00000561395	CSH2	P0DML3	217 aa		7.73	□□□□□ -1.17
TPM1-231	ENST00000561395	CTSA	P10619	480 aa		7.73	□□□□□ -1.17
TPM1-231	ENST00000561395	SLC2A3	P11169	496 aa		7.73	□□□□□ -1.17
TPM1-231	ENST00000561395	GLUL	P15104	373 aa		7.73	□□□□□ -1.17
TPM1-231	ENST00000561395	HMGA1	P17096	107 aa	Known RBP	7.73	□□□□□ -1.17

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