RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 C4orf19Q8IY42 314 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 CLYBLQ8N0X4 340 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 LRRC43Q8N309 656 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 GALNT4Q8N4A0 578 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 ATAD1Q8NBU5 361 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 CAMKVQ8NCB2 501 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 ZBTB44Q8NCP5 570 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 C11orf65Q8NCR3 313 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 DNAAF1Q8NEP3 725 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 Q8NFD4 153 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 TSPAN14Q8NG11 270 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 MBD3L2Q8NHZ7 208 aaPredicted RBP2.13□□□□□ -2.07
RTF1-207ENST00000561076 ST7LQ8TDW4 575 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 HASPINQ8TF76 798 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 ST8SIA2Q92186 375 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 ANP32BQ92688 251 aaKnown RBP2.13□□□□□ -2.07
RTF1-207ENST00000561076 THRSPQ92748 146 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 LPPQ93052 612 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 GTF3C6Q969F1 213 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 EEF2KMTQ96G04 330 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 MASTLQ96GX5 879 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 RBM18Q96H35 190 aaKnown RBP2.13□□□□□ -2.07
RTF1-207ENST00000561076 C1orf74Q96LT6 269 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 GDAP1L1Q96MZ0 367 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 DGAT2Q96PD7 388 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 FAM111AQ96PZ2 611 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 UBL7Q96S82 380 aaPredicted RBP2.13□□□□□ -2.07
RTF1-207ENST00000561076 PKP4Q99569 1192 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 EGFL8Q99944 293 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 SH3GL2Q99962 352 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 SOX7Q9BT81 388 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 SLC25A23Q9BV35 468 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 MECRQ9BV79 373 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 NPLQ9BXD5 320 aaPredicted RBP2.13□□□□□ -2.07
RTF1-207ENST00000561076 TLR10Q9BXR5 811 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 TRIM31Q9BZY9 425 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 NYXQ9GZU5 481 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 ADAMTS10Q9H324 1103 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 EPB41L4BQ9H329 900 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 HRH4Q9H3N8 390 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 PCDH18Q9HCL0 1135 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 LTB4R2Q9NPC1 389 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 FANCFQ9NPI8 374 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 SEMA4BQ9NPR2 832 aaPredicted RBP2.13□□□□□ -2.07
RTF1-207ENST00000561076 MBNL1Q9NR56 388 aaKnown RBP2.13□□□□□ -2.07
RTF1-207ENST00000561076 SNX15Q9NRS6 342 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 RXFP3Q9NSD7 469 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 ZBTB40Q9NUA8 1239 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 THAP1Q9NVV9 213 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 OGFRQ9NZT2 677 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 CGNQ9P2M7 1197 aaKnown RBP2.13□□□□□ -2.07
RTF1-207ENST00000561076 PEMTQ9UBM1 199 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 DNAJB9Q9UBS3 223 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 SLC25A10Q9UBX3 287 aaPredicted RBP2.13□□□□□ -2.07
RTF1-207ENST00000561076 FBLN5Q9UBX5 448 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 NKX1-2Q9UD57 310 aaPredicted RBP2.13□□□□□ -2.07
RTF1-207ENST00000561076 STEAP1Q9UHE8 339 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 HAO1Q9UJM8 370 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 OSGIN1Q9UJX0 560 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 TMEM59LQ9UK28 342 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 SLC12A4Q9UP95 1085 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 EXOC7Q9UPT5 735 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 DHDHQ9UQ10 334 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 WDR37Q9Y2I8 494 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 PCDHB7Q9Y5E2 793 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 PCDHB2Q9Y5E7 798 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 ATP8B3O60423 1300 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 IGSF1Q8N6C5 1336 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 PITPNM2Q9BZ72 1349 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 ZNF644Q9H582 1327 aaPredicted RBP2.13□□□□□ -2.07
RTF1-207ENST00000561076 KDM3AQ9Y4C1 1321 aa2.13□□□□□ -2.07
RTF1-207ENST00000561076 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.12□□□□□ -2.07
RTF1-207ENST00000561076 A4D1N5 150 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 OR2W5A6NFC9 320 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 OR6C76A6NM76 312 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 TMEM110-MUSTN1A8MSY1 372 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 A8MVJ9 347 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 PRR5-ARHGAP8B1AHC4 643 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 UBXN8O00124 270 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 SNAP23O00161 211 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 PSMD14O00487 310 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 NRG2O14511 850 aaPredicted RBP2.12□□□□□ -2.07
RTF1-207ENST00000561076 RASGRF2O14827 1237 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 CASQ2O14958 399 aaPredicted RBP2.12□□□□□ -2.07
RTF1-207ENST00000561076 PER2O15055 1255 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 CD3EAPO15446 510 aaKnown RBP2.12□□□□□ -2.07
RTF1-207ENST00000561076 SRGAP3O43295 1099 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 CEP104O60308 925 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 TADA2AO75478 443 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 RECQL5O94762 991 aaPredicted RBP2.12□□□□□ -2.07
RTF1-207ENST00000561076 TPPPO94811 219 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 DDHD2O94830 711 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 WDR47O94967 919 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 IFNB1P01574 187 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 OPN1MWP04001 364 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 INHBAP08476 426 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 VIMP08670 466 aaKnown RBP2.12□□□□□ -2.07
RTF1-207ENST00000561076 SUPT20HL2P0C7V6 817 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 PRR35P0CG20 571 aa2.12□□□□□ -2.07
RTF1-207ENST00000561076 OPN1MW2P0DN77 364 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms