RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 PRSS16Q9NQE7 514 aa13.35□□□□□ -0.27
CTDSPL2-209ENST00000560620 TAS2R14Q9NYV8 317 aa13.35□□□□□ -0.27
CTDSPL2-209ENST00000560620 MPP6Q9NZW5 540 aa13.35□□□□□ -0.27
CTDSPL2-209ENST00000560620 ATXN2Q99700 1313 aaKnown RBP13.35□□□□□ -0.27
CTDSPL2-209ENST00000560620 GVINP1Q7Z2Y8 2422 aa13.34□□□□□ -0.27
CTDSPL2-209ENST00000560620 TTC34A8MYJ7 566 aa13.34□□□□□ -0.27
CTDSPL2-209ENST00000560620 I6L893 689 aaPredicted RBP13.34□□□□□ -0.27
CTDSPL2-209ENST00000560620 ATMINO43313 823 aaPredicted RBP13.34□□□□□ -0.27
CTDSPL2-209ENST00000560620 GDF9O60383 454 aa13.34□□□□□ -0.27
CTDSPL2-209ENST00000560620 SDHBP21912 280 aa13.34□□□□□ -0.27
CTDSPL2-209ENST00000560620 OR1E1P30953 314 aa13.34□□□□□ -0.27
CTDSPL2-209ENST00000560620 PTPN9P43378 593 aa13.34□□□□□ -0.27
CTDSPL2-209ENST00000560620 STK19P49842 368 aaPredicted RBP13.34□□□□□ -0.27
CTDSPL2-209ENST00000560620 TPMTP51580 245 aa13.34□□□□□ -0.27
CTDSPL2-209ENST00000560620 GSCP56915 257 aaPredicted RBP13.34□□□□□ -0.27
CTDSPL2-209ENST00000560620 ZNF33AQ06730 810 aa13.34□□□□□ -0.27
CTDSPL2-209ENST00000560620 NFKBIBQ15653 356 aa13.34□□□□□ -0.27
CTDSPL2-209ENST00000560620 HNRNPA1L2Q32P51 320 aaKnown RBP13.34□□□□□ -0.27
CTDSPL2-209ENST00000560620 TTC31Q49AM3 519 aaPredicted RBP13.34□□□□□ -0.27
CTDSPL2-209ENST00000560620 ALFQ53S48 1182 aa13.34□□□□□ -0.27
CTDSPL2-209ENST00000560620 FIGNQ5HY92 759 aa13.34□□□□□ -0.27
CTDSPL2-209ENST00000560620 SPDYCQ5MJ68 293 aa13.34□□□□□ -0.27
CTDSPL2-209ENST00000560620 C6orf118Q5T5N4 469 aa13.34□□□□□ -0.27
CTDSPL2-209ENST00000560620 ZNF776Q68DI1 518 aaPredicted RBP13.34□□□□□ -0.27
CTDSPL2-209ENST00000560620 TCEAL6Q6IPX3 200 aa13.34□□□□□ -0.27
CTDSPL2-209ENST00000560620 CXorf57Q6NSI4 855 aaKnown RBP13.34□□□□□ -0.27
CTDSPL2-209ENST00000560620 RWDD4Q6NW29 188 aaKnown RBP13.34□□□□□ -0.27
CTDSPL2-209ENST00000560620 STRADAQ7RTN6 431 aa13.34□□□□□ -0.27
CTDSPL2-209ENST00000560620 ZNF571Q7Z3V5 609 aaPredicted RBP13.34□□□□□ -0.27
CTDSPL2-209ENST00000560620 VPS36Q86VN1 386 aa13.34□□□□□ -0.27
CTDSPL2-209ENST00000560620 TCEAL3Q969E4 200 aa13.34□□□□□ -0.27
CTDSPL2-209ENST00000560620 RMDN1Q96DB5 314 aa13.34□□□□□ -0.27
CTDSPL2-209ENST00000560620 TOE1Q96GM8 510 aaKnown RBP13.34□□□□□ -0.27
CTDSPL2-209ENST00000560620 HSPA12BQ96MM6 686 aa13.34□□□□□ -0.27
CTDSPL2-209ENST00000560620 FEM1AQ9BSK4 669 aa13.34□□□□□ -0.27
CTDSPL2-209ENST00000560620 GPR174Q9BXC1 333 aa13.34□□□□□ -0.27
CTDSPL2-209ENST00000560620 XPO4Q9C0E2 1151 aaKnown RBP13.34□□□□□ -0.27
CTDSPL2-209ENST00000560620 TTYH3Q9C0H2 523 aa13.34□□□□□ -0.27
CTDSPL2-209ENST00000560620 FBRSQ9HAH7 460 aa13.34□□□□□ -0.27
CTDSPL2-209ENST00000560620 ITM2CQ9NQX7 267 aa13.34□□□□□ -0.27
CTDSPL2-209ENST00000560620 PARVAQ9NVD7 372 aa13.34□□□□□ -0.27
CTDSPL2-209ENST00000560620 OR12D3Q9UGF7 316 aa13.34□□□□□ -0.27
CTDSPL2-209ENST00000560620 SLCO3A1Q9UIG8 710 aa13.34□□□□□ -0.27
CTDSPL2-209ENST00000560620 LUC7L2Q9Y383 392 aaKnown RBP13.34□□□□□ -0.27
CTDSPL2-209ENST00000560620 ZNF292O60281 2723 aa13.34□□□□□ -0.27
CTDSPL2-209ENST00000560620 CKAP5Q14008 2032 aa13.34□□□□□ -0.27
CTDSPL2-209ENST00000560620 MUC22E2RYF6 1773 aaPredicted RBP13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 EDDM13A0A1B0GTR0 161 aa13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 A0A1W2PQJ5 194 aa13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 MEI4A8MW99 385 aa13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 KHNYNO15037 678 aaKnown RBP13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 CCP110O43303 1012 aa13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 CBFA2T2O43439 604 aa13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 BNIP3LO60238 219 aa13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 SIN3BO75182 1162 aa13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 ENDOD1O94919 500 aa13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 FTLP02792 175 aaPredicted RBP13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 CFIP05156 583 aa13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 ITPKAP23677 461 aa13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 OXTRP30559 389 aa13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 ADRA1BP35368 520 aa13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 PRKCIP41743 596 aa13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 ZNF143P52747 638 aaPredicted RBP13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 RPL7AP62424 266 aaKnown RBP13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 KRT83P78385 493 aa13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 PLA2G2CQ5R387 149 aa13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 SYCP2LQ5T4T6 812 aa13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 E4F1Q66K89 784 aaPredicted RBP13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 SLFN11Q7Z7L1 901 aa13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 SETD3Q86TU7 594 aaPredicted RBP13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 METTL3Q86U44 580 aaKnown RBP13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 DNAAF5Q86Y56 855 aa13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 DRC7Q8IY82 874 aa13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 OR52K2Q8NGK3 314 aa13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 FOXJ1Q92949 421 aa13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 ZNF653Q96CK0 615 aa13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 IQCDQ96DY2 449 aa13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 MYO19Q96H55 970 aa13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 VCPIP1Q96JH7 1222 aa13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 MRGPRX3Q96LB0 322 aa13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 SPON2Q9BUD6 331 aa13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 C2orf49Q9BVC5 232 aaPredicted RBP13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 ZYG11BQ9C0D3 744 aa13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 USP36Q9P275 1121 aaKnown RBP13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 MYO1AQ9UBC5 1043 aa13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 NCKAP1Q9Y2A7 1128 aa13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 BZW2Q9Y6E2 419 aaKnown RBP13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 NUP205Q92621 2012 aa13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 CEP192Q8TEP8 1941 aa13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 PLXND1Q9Y4D7 1925 aa13.33□□□□□ -0.28
CTDSPL2-209ENST00000560620 DRGXA6NNA5 263 aa13.32□□□□□ -0.28
CTDSPL2-209ENST00000560620 PATE3B3GLJ2 98 aa13.32□□□□□ -0.28
CTDSPL2-209ENST00000560620 RTN2O75298 545 aa13.32□□□□□ -0.28
CTDSPL2-209ENST00000560620 SERPING1P05155 500 aa13.32□□□□□ -0.28
CTDSPL2-209ENST00000560620 PBX1P40424 430 aa13.32□□□□□ -0.28
CTDSPL2-209ENST00000560620 DPP6P42658 865 aa13.32□□□□□ -0.28
CTDSPL2-209ENST00000560620 PLK1P53350 603 aa13.32□□□□□ -0.28
CTDSPL2-209ENST00000560620 HDAC4P56524 1084 aa13.32□□□□□ -0.28
CTDSPL2-209ENST00000560620 ZBED6P86452 979 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms