RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 GGA3Q9NZ52 723 aa14.08□□□□□ -0.15
CSPG4P12-202ENST00000559989 ARHGEF12Q9NZN5 1544 aa14.08□□□□□ -0.15
CSPG4P12-202ENST00000559989 THRBP10828 461 aa14.08□□□□□ -0.15
CSPG4P12-202ENST00000559989 TLX1P31314 330 aaPredicted RBP14.08□□□□□ -0.15
CSPG4P12-202ENST00000559989 CYP4F2P78329 520 aa14.08□□□□□ -0.15
CSPG4P12-202ENST00000559989 CYP4F3Q08477 520 aa14.08□□□□□ -0.15
CSPG4P12-202ENST00000559989 MTF1Q14872 753 aa14.08□□□□□ -0.15
CSPG4P12-202ENST00000559989 MILR1Q7Z6M3 343 aa14.08□□□□□ -0.15
CSPG4P12-202ENST00000559989 SAPCD2Q86UD0 394 aa14.08□□□□□ -0.15
CSPG4P12-202ENST00000559989 FAM81AQ8TBF8 368 aa14.08□□□□□ -0.15
CSPG4P12-202ENST00000559989 POP5Q969H6 163 aaKnown RBP14.08□□□□□ -0.15
CSPG4P12-202ENST00000559989 ZNF285Q96NJ3 590 aa14.08□□□□□ -0.15
CSPG4P12-202ENST00000559989 TNKS2Q9H2K2 1166 aa14.08□□□□□ -0.15
CSPG4P12-202ENST00000559989 ZNF208O43345 1280 aa14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 UBOX5O94941 541 aa14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 PCDH8O95206 1070 aa14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 NKX1-1Q15270 411 aaPredicted RBP14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 MEA1Q16626 185 aa14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 GPAT3Q53EU6 434 aa14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 ATCAYQ86WG3 371 aa14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 BHLHE22Q8NFJ8 381 aaPredicted RBP14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 GPER1Q99527 375 aa14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 CDH7Q9ULB5 785 aa14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 A0A0G2JPF8 293 aa14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 HNRNPCL3B7ZW38 293 aa14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 HNRNPCL4P0DMR1 293 aa14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 PAX7P23759 505 aa14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 SGCGQ13326 291 aa14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 TPCN2Q8NHX9 752 aa14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 CPNE1Q99829 537 aa14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 TOPBP1Q92547 1522 aa14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 SDC2P34741 201 aa14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 NT5DC3Q86UY8 548 aa14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 IPCEF1Q8WWN9 437 aaPredicted RBP14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 C7orf25Q9BPX7 421 aa14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 ANGPT4Q9Y264 503 aa14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 ALG6Q9Y672 507 aa14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 A0A1B0GTH6 734 aa14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 LTFP02788 710 aa14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 PLCZ1Q86YW0 608 aa14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 PHF21BQ96EK2 531 aa14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 PAFAH2Q99487 392 aa14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 COLEC11Q9BWP8 271 aa14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 MED28Q9H204 178 aa14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 MID1IP1Q9NPA3 183 aa14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 IFNGP01579 166 aa14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 NMT1P30419 496 aaKnown RBP14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 CRATP43155 626 aa14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 CDH4P55283 916 aa14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 CAV3P56539 151 aa14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 NRF1Q16656 503 aa14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 HECTD3Q5T447 861 aa14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 POTEHQ6S545 545 aa14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 ATG9AQ7Z3C6 839 aa14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 OFCC1Q8IZS5 231 aa14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 C17orf50Q8WW18 174 aa14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 DDIT4Q9NX09 232 aa14.08□□□□□ -0.16
CSPG4P12-202ENST00000559989 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 ALDH7A1P49419 539 aaKnown RBP14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 HNRNPLLQ8WVV9 542 aaKnown RBP14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 TESCQ96BS2 214 aa14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 TMEM47Q9BQJ4 181 aa14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 SEMA6AQ9H2E6 1030 aa14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 OGDHLQ9ULD0 1010 aa14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 SLC12A4Q9UP95 1085 aa14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 FAM172BPA6NC97 362 aa14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 NCAM2O15394 837 aa14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 SERPINF2P08697 491 aa14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 IDH2P48735 452 aaKnown RBP14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 XKR3Q5GH77 459 aa14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 SLC26A11Q86WA9 606 aa14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 CASKIN2Q8WXE0 1202 aa14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 C12orf66Q96MD2 445 aa14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 AP1G2O75843 785 aa14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 MTA2O94776 668 aa14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 PECAM1P16284 738 aaPredicted RBP14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 KCNJ1P48048 391 aa14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 OLR1P78380 273 aa14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 ZNF549Q6P9A3 640 aa14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 SYT12Q8IV01 421 aa14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 SPAG16Q8N0X2 631 aa14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 OR5T3Q8NGG3 340 aa14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 LRRC20Q8TCA0 184 aa14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 CCNG2Q16589 344 aa14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 GALNTL5Q7Z4T8 443 aa14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 ANKARQ7Z5J8 1434 aa14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 MED24O75448 989 aa14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 HLA-DRAP01903 254 aa14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 C9P02748 559 aa14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 SERPINE1P05121 402 aa14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 MBL2P11226 248 aaPredicted RBP14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 COX7A2P14406 83 aa14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 ERCC2P18074 760 aa14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 TCEAL6Q6IPX3 200 aa14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 ZFP28Q8NHY6 868 aa14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 PHF12Q96QT6 1004 aa14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 PLA2G4CQ9UP65 541 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms