RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 MCOLN1Q9GZU1 580 aa10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 RXFP1Q9HBX9 757 aa10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 IL23AQ9NPF7 189 aa10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 RGS18Q9NS28 235 aa10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 SIX4Q9UIU6 781 aa10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 DOLKQ9UPQ8 538 aa10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 APOBEC2Q9Y235 224 aaKnown RBP10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 SMAPO00193 183 aa10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 PER2O15055 1255 aa10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 HCRTO43612 131 aa10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 ADAMTS4O75173 837 aa10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 RBL1P28749 1068 aa10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 ADRA1BP35368 520 aa10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 USP10Q14694 798 aaKnown RBP10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 UGP2Q16851 508 aa10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 KATNAL2Q8IYT4 538 aa10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 ARL14EPQ8N8R7 260 aaPredicted RBP10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 SUSD6Q92537 303 aa10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 ZYG11BQ9C0D3 744 aa10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 SIX2Q9NPC8 291 aa10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 EPS15L1Q9UBC2 864 aa10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 CCDC195A0A1B0GUA6 201 aa10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 RNF103O00237 685 aa10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 TBC1D4O60343 1298 aa10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 DAB1O75553 588 aa10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 PCDH8O95206 1070 aa10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 PTPN2P17706 415 aa10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 TAS2R40P59535 323 aa10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 FNDC3BQ53EP0 1204 aaKnown RBP10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 RARS2Q5T160 578 aaKnown RBP10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 XYLT1Q86Y38 959 aa10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 MREGQ8N565 214 aa10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 ICA1LQ8NDH6 482 aa10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 DQX1Q8TE96 717 aaKnown RBP10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 FOXP3Q9BZS1 431 aa10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 TM6SF2Q9BZW4 377 aa10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 DCLRE1BQ9H816 532 aa10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 BRD9Q9H8M2 597 aa10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 PDLIM7Q9NR12 457 aa10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 PIH1D1Q9NWS0 290 aaKnown RBP10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 PHTF1Q9UMS5 762 aa10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 PCDHGC3Q9UN70 934 aa10.89□□□□□ -0.67
CARMIL3-202ENST00000559694 GON4LQ3T8J9 2241 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 RALBP11234 206 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 ACADSP16219 412 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 TPH1P17752 444 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 NR2C2P49116 596 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 PHEXP78562 749 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 TRADDQ15628 312 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 SMG8Q8ND04 991 aaKnown RBP10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 CDC26Q8NHZ8 85 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 FUBP3Q96I24 572 aaKnown RBP eCLIP10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 MFSD1Q9H3U5 465 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 SRRM3A6NNA2 597 aaPredicted RBP10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 B2RBV5 119 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 APOC4-APOC2K7ER74 178 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 PAGE1O75459 146 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 APOC2P02655 101 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 ACADMP11310 421 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 CHRM3P20309 590 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 TNFRSF8P28908 595 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 SERPINB3P29508 390 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 CPA2P48052 419 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 ZNF135P52742 658 aaPredicted RBP10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 CSE1LP55060 971 aaKnown RBP10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 KCNJ2P63252 427 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 RAB30Q15771 203 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 CCDC85BQ15834 202 aaPredicted RBP10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 NPNTQ6UXI9 565 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 LPCAT1Q8NF37 534 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 RNF157Q96PX1 679 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 THTPAQ9BU02 230 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 TSSK1BQ9BXA7 367 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 ADGRE3Q9BY15 652 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 PRDM12Q9H4Q4 367 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 CHST7Q9NS84 486 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 AJAP1Q9UKB5 411 aaPredicted RBP10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 GOLGA4Q13439 2230 aaKnown RBP10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 ARHGAP10A1A4S6 786 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 MAGEA13PA6NCF6 341 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 YJEFN3A6XGL0 299 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 E7ENQ6 273 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 PAPSS1O43252 624 aaPredicted RBP10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 MOGSQ13724 837 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 LRRC38Q5VT99 294 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 PLEKHA7Q6IQ23 1121 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 SLC26A9Q7LBE3 791 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 DNAJB7Q7Z6W7 309 aaPredicted RBP10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 CALML6Q8TD86 181 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 LRRN4Q8WUT4 740 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 POF1BQ8WVV4 589 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 ULK4Q96C45 1275 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 MTBPQ96DY7 904 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 SERPINI1Q99574 410 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 TMEM175Q9BSA9 504 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 FRMD8Q9BZ67 464 aaPredicted RBP10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 MIOSQ9NXC5 875 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 SEPT3Q9UH03 358 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms