RNA–Protein interactions for RNA: ENST00000559566.5

SHF-205, Transcript of Src homology 2 domain containing F, humanhuman

TSL 1 (best)

Gene SHF, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-205ENST00000559566 RWDD4Q6NW29 188 aaKnown RBP20.04■□□□□ 0.8
SHF-205ENST00000559566 RAD9BQ6WBX8 426 aa20.04■□□□□ 0.8
SHF-205ENST00000559566 LONP2Q86WA8 852 aa20.04■□□□□ 0.8
SHF-205ENST00000559566 TMEM139Q8IV31 216 aa20.04■□□□□ 0.8
SHF-205ENST00000559566 CCDC117Q8IWD4 279 aaPredicted RBP20.04■□□□□ 0.8
SHF-205ENST00000559566 NIPA2Q8N8Q9 360 aa20.04■□□□□ 0.8
SHF-205ENST00000559566 OR7D4Q8NG98 312 aa20.04■□□□□ 0.8
SHF-205ENST00000559566 TBC1D31Q96DN5 1066 aa20.04■□□□□ 0.8
SHF-205ENST00000559566 KCTD15Q96SI1 283 aaPredicted RBP20.04■□□□□ 0.8
SHF-205ENST00000559566 FAM126AQ9BYI3 521 aaPredicted RBP20.04■□□□□ 0.8
SHF-205ENST00000559566 IRF2BPLQ9H1B7 796 aa20.04■□□□□ 0.8
SHF-205ENST00000559566 CTTNBP2NLQ9P2B4 639 aa20.04■□□□□ 0.8
SHF-205ENST00000559566 USP18Q9UMW8 372 aa20.04■□□□□ 0.8
SHF-205ENST00000559566 AP4E1Q9UPM8 1137 aa20.04■□□□□ 0.8
SHF-205ENST00000559566 ERVW-1Q9UQF0 538 aa20.04■□□□□ 0.8
SHF-205ENST00000559566 PCDHGA2Q9Y5H1 932 aa20.04■□□□□ 0.8
SHF-205ENST00000559566 DMDP11532 3685 aa20.04■□□□□ 0.8
SHF-205ENST00000559566 AXIN1O15169 862 aa20.03■□□□□ 0.8
SHF-205ENST00000559566 CREB3O43889 395 aa20.03■□□□□ 0.8
SHF-205ENST00000559566 SNAP91O60641 907 aa20.03■□□□□ 0.8
SHF-205ENST00000559566 RNF8O76064 485 aa20.03■□□□□ 0.8
SHF-205ENST00000559566 LCA5LO95447 670 aa20.03■□□□□ 0.8
SHF-205ENST00000559566 GLDCP23378 1020 aa20.03■□□□□ 0.8
SHF-205ENST00000559566 SLC25A11Q02978 314 aaKnown RBP20.03■□□□□ 0.8
SHF-205ENST00000559566 KCNT1Q5JUK3 1230 aa20.03■□□□□ 0.8
SHF-205ENST00000559566 SERPINA13PQ6UXR4 307 aa20.03■□□□□ 0.8
SHF-205ENST00000559566 HMGB4Q8WW32 186 aa20.03■□□□□ 0.8
SHF-205ENST00000559566 RPL10LQ96L21 214 aaKnown RBP20.03■□□□□ 0.8
SHF-205ENST00000559566 DHX35Q9H5Z1 703 aaKnown RBP20.03■□□□□ 0.8
SHF-205ENST00000559566 CD93Q9NPY3 652 aa20.03■□□□□ 0.8
SHF-205ENST00000559566 UVRAGQ9P2Y5 699 aa20.03■□□□□ 0.8
SHF-205ENST00000559566 EBF1Q9UH73 591 aa20.03■□□□□ 0.8
SHF-205ENST00000559566 IP6K2Q9UHH9 426 aa20.03■□□□□ 0.8
SHF-205ENST00000559566 SLCO3A1Q9UIG8 710 aa20.03■□□□□ 0.8
SHF-205ENST00000559566 INVSQ9Y283 1065 aa20.03■□□□□ 0.8
SHF-205ENST00000559566 CACNA1HO95180 2353 aa20.02■□□□□ 0.8
SHF-205ENST00000559566 MYO15AQ9UKN7 3530 aa20.02■□□□□ 0.8
SHF-205ENST00000559566 ATP5BP06576 529 aaKnown RBP20.02■□□□□ 0.8
SHF-205ENST00000559566 RHOQP17081 205 aa20.02■□□□□ 0.8
SHF-205ENST00000559566 NDUFV2P19404 249 aa20.02■□□□□ 0.8
SHF-205ENST00000559566 OR1E1P30953 314 aa20.02■□□□□ 0.8
SHF-205ENST00000559566 PCK1P35558 622 aa20.02■□□□□ 0.8
SHF-205ENST00000559566 NRLP54845 237 aa20.02■□□□□ 0.8
SHF-205ENST00000559566 AIF1P55008 147 aa20.02■□□□□ 0.8
SHF-205ENST00000559566 SLC12A1Q13621 1099 aa20.02■□□□□ 0.8
SHF-205ENST00000559566 PIGHQ14442 188 aaPredicted RBP20.02■□□□□ 0.8
SHF-205ENST00000559566 SMTNL2Q2TAL5 461 aa20.02■□□□□ 0.8
SHF-205ENST00000559566 ERMARDQ5T6L9 678 aa20.02■□□□□ 0.8
SHF-205ENST00000559566 SDE2Q6IQ49 451 aa20.02■□□□□ 0.8
SHF-205ENST00000559566 SETD3Q86TU7 594 aaPredicted RBP20.02■□□□□ 0.8
SHF-205ENST00000559566 FRMD1Q8N878 549 aa20.02■□□□□ 0.8
SHF-205ENST00000559566 SLC35G2Q8TBE7 412 aa20.02■□□□□ 0.8
SHF-205ENST00000559566 MKRN2Q9H000 416 aaKnown RBP20.02■□□□□ 0.8
SHF-205ENST00000559566 NOL6Q9H6R4 1146 aaKnown RBP20.02■□□□□ 0.8
SHF-205ENST00000559566 POLMQ9NP87 494 aaPredicted RBP20.02■□□□□ 0.8
SHF-205ENST00000559566 TMEM248Q9NWD8 314 aa20.02■□□□□ 0.8
SHF-205ENST00000559566 DNAI1Q9UI46 699 aa20.02■□□□□ 0.8
SHF-205ENST00000559566 REXO2Q9Y3B8 237 aaKnown RBP20.02■□□□□ 0.8
SHF-205ENST00000559566 CCDC163A0A0D9SF12 145 aa20.01■□□□□ 0.79
SHF-205ENST00000559566 TTC34A8MYJ7 566 aa20.01■□□□□ 0.79
SHF-205ENST00000559566 MYO1FO00160 1098 aa20.01■□□□□ 0.79
SHF-205ENST00000559566 DCLK1O15075 740 aa20.01■□□□□ 0.79
SHF-205ENST00000559566 NPC1O15118 1278 aa20.01■□□□□ 0.79
SHF-205ENST00000559566 PRPSAP2O60256 369 aa20.01■□□□□ 0.79
SHF-205ENST00000559566 MOCS3O95396 460 aa20.01■□□□□ 0.79
SHF-205ENST00000559566 ASLP04424 464 aa20.01■□□□□ 0.79
SHF-205ENST00000559566 EPHX1P07099 455 aa20.01■□□□□ 0.79
SHF-205ENST00000559566 VAV1P15498 845 aa20.01■□□□□ 0.79
SHF-205ENST00000559566 DESP17661 470 aa20.01■□□□□ 0.79
SHF-205ENST00000559566 EPHB2P29323 1055 aa20.01■□□□□ 0.79
SHF-205ENST00000559566 ACVRL1P37023 503 aa20.01■□□□□ 0.79
SHF-205ENST00000559566 MAGEA1P43355 309 aa20.01■□□□□ 0.79
SHF-205ENST00000559566 COPAP53621 1224 aa20.01■□□□□ 0.79
SHF-205ENST00000559566 TAS2R40P59535 323 aa20.01■□□□□ 0.79
SHF-205ENST00000559566 ECT2LQ008S8 904 aa20.01■□□□□ 0.79
SHF-205ENST00000559566 ACAP1Q15027 740 aa20.01■□□□□ 0.79
SHF-205ENST00000559566 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.01■□□□□ 0.79
SHF-205ENST00000559566 ATRIPQ8WXE1 791 aa20.01■□□□□ 0.79
SHF-205ENST00000559566 MUC3BQ9H195 1237 aa20.01■□□□□ 0.79
SHF-205ENST00000559566 ZWILCHQ9H900 591 aa20.01■□□□□ 0.79
SHF-205ENST00000559566 IMPACTQ9P2X3 320 aa20.01■□□□□ 0.79
SHF-205ENST00000559566 VPS28Q9UK41 221 aa20.01■□□□□ 0.79
SHF-205ENST00000559566 PLA2G4CQ9UP65 541 aa20.01■□□□□ 0.79
SHF-205ENST00000559566 ILVBLA1L0T0 632 aa20■□□□□ 0.79
SHF-205ENST00000559566 RCCD1A6NED2 376 aa20■□□□□ 0.79
SHF-205ENST00000559566 PROB1E7EW31 1015 aa20■□□□□ 0.79
SHF-205ENST00000559566 PROSCO94903 275 aa20■□□□□ 0.79
SHF-205ENST00000559566 MT-CO1P00395 513 aa20■□□□□ 0.79
SHF-205ENST00000559566 RARAP10276 462 aa20■□□□□ 0.79
SHF-205ENST00000559566 OXCT1P55809 520 aa20■□□□□ 0.79
SHF-205ENST00000559566 C6orf118Q5T5N4 469 aa20■□□□□ 0.79
SHF-205ENST00000559566 CCDC170Q8IYT3 715 aa20■□□□□ 0.79
SHF-205ENST00000559566 RTL3Q8N8U3 475 aaKnown RBP20■□□□□ 0.79
SHF-205ENST00000559566 RLN3Q8WXF3 142 aa20■□□□□ 0.79
SHF-205ENST00000559566 MRGPRX1Q96LB2 322 aa20■□□□□ 0.79
SHF-205ENST00000559566 PRSS16Q9NQE7 514 aa20■□□□□ 0.79
SHF-205ENST00000559566 VPS51Q9UID3 782 aa20■□□□□ 0.79
SHF-205ENST00000559566 PCDHA13Q9Y5I0 950 aa20■□□□□ 0.79
SHF-205ENST00000559566 ACTL7AQ9Y615 435 aa20■□□□□ 0.79
SHF-205ENST00000559566 EPN1Q9Y6I3 576 aaPredicted RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms