RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 NPWQ8N729 165 aa15.22■□□□□ 0.03
SNRPA1-207ENST00000559309 TTC16Q8NEE8 873 aa15.22■□□□□ 0.03
SNRPA1-207ENST00000559309 ACE2Q9BYF1 805 aaPredicted RBP15.22■□□□□ 0.03
SNRPA1-207ENST00000559309 CATSPERBQ9H7T0 1116 aa15.22■□□□□ 0.03
SNRPA1-207ENST00000559309 HEBP1Q9NRV9 189 aa15.22■□□□□ 0.03
SNRPA1-207ENST00000559309 TTC7AQ9ULT0 858 aaPredicted RBP15.22■□□□□ 0.03
SNRPA1-207ENST00000559309 NYNRINQ9P2P1 1898 aaKnown RBP15.22■□□□□ 0.03
SNRPA1-207ENST00000559309 WDFY4Q6ZS81 3184 aa15.22■□□□□ 0.03
SNRPA1-207ENST00000559309 TRIM24O15164 1050 aa15.21■□□□□ 0.03
SNRPA1-207ENST00000559309 AMPD1P23109 780 aa15.21■□□□□ 0.03
SNRPA1-207ENST00000559309 MSNP26038 577 aaKnown RBP15.21■□□□□ 0.03
SNRPA1-207ENST00000559309 GJC1P36383 396 aa15.21■□□□□ 0.03
SNRPA1-207ENST00000559309 SLC6A11P48066 632 aa15.21■□□□□ 0.03
SNRPA1-207ENST00000559309 SOX9P48436 509 aa15.21■□□□□ 0.03
SNRPA1-207ENST00000559309 VASPP50552 380 aaPredicted RBP15.21■□□□□ 0.03
SNRPA1-207ENST00000559309 NDST2P52849 883 aa15.21■□□□□ 0.03
SNRPA1-207ENST00000559309 YBEYP58557 167 aaPredicted RBP15.21■□□□□ 0.03
SNRPA1-207ENST00000559309 STARD6P59095 220 aa15.21■□□□□ 0.03
SNRPA1-207ENST00000559309 GNG11P61952 73 aa15.21■□□□□ 0.03
SNRPA1-207ENST00000559309 PRKCQQ04759 706 aa15.21■□□□□ 0.03
SNRPA1-207ENST00000559309 KRT81Q14533 505 aa15.21■□□□□ 0.03
SNRPA1-207ENST00000559309 ANO4Q32M45 955 aa15.21■□□□□ 0.03
SNRPA1-207ENST00000559309 TMEM196Q5HYL7 178 aa15.21■□□□□ 0.03
SNRPA1-207ENST00000559309 TMEM215Q68D42 235 aa15.21■□□□□ 0.03
SNRPA1-207ENST00000559309 AADACL2Q6P093 401 aa15.21■□□□□ 0.03
SNRPA1-207ENST00000559309 C1orf228Q6PIY5 440 aa15.21■□□□□ 0.03
SNRPA1-207ENST00000559309 BBS12Q6ZW61 710 aa15.21■□□□□ 0.03
SNRPA1-207ENST00000559309 ADIPOR2Q86V24 386 aa15.21■□□□□ 0.03
SNRPA1-207ENST00000559309 SUGP1Q8IWZ8 645 aaKnown RBP15.21■□□□□ 0.03
SNRPA1-207ENST00000559309 LZTR1Q8N653 840 aa15.21■□□□□ 0.03
SNRPA1-207ENST00000559309 CSGALNACT1Q8TDX6 532 aa15.21■□□□□ 0.03
SNRPA1-207ENST00000559309 RNF25Q96BH1 459 aaPredicted RBP15.21■□□□□ 0.03
SNRPA1-207ENST00000559309 XPO6Q96QU8 1125 aaKnown RBP15.21■□□□□ 0.03
SNRPA1-207ENST00000559309 FBRSL1Q9HCM7 1045 aaKnown RBP15.21■□□□□ 0.03
SNRPA1-207ENST00000559309 HCN2Q9UL51 889 aa15.21■□□□□ 0.03
SNRPA1-207ENST00000559309 SNX12Q9UMY4 172 aa15.21■□□□□ 0.03
SNRPA1-207ENST00000559309 MFHAS1Q9Y4C4 1052 aa15.21■□□□□ 0.03
SNRPA1-207ENST00000559309 PIAS3Q9Y6X2 628 aa15.21■□□□□ 0.03
SNRPA1-207ENST00000559309 F5P12259 2224 aa15.21■□□□□ 0.03
SNRPA1-207ENST00000559309 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.2■□□□□ 0.02
SNRPA1-207ENST00000559309 TYW5A2RUC4 315 aaKnown RBP15.2■□□□□ 0.02
SNRPA1-207ENST00000559309 KRBA1A5PL33 1030 aa15.2■□□□□ 0.02
SNRPA1-207ENST00000559309 ENC1O14682 589 aa15.2■□□□□ 0.02
SNRPA1-207ENST00000559309 ZMPSTE24O75844 475 aa15.2■□□□□ 0.02
SNRPA1-207ENST00000559309 TUBB4AP04350 444 aa15.2■□□□□ 0.02
SNRPA1-207ENST00000559309 CD70P32970 193 aa15.2■□□□□ 0.02
SNRPA1-207ENST00000559309 OXCT1P55809 520 aa15.2■□□□□ 0.02
SNRPA1-207ENST00000559309 ZXDAP98168 799 aa15.2■□□□□ 0.02
SNRPA1-207ENST00000559309 LMAN2Q12907 356 aa15.2■□□□□ 0.02
SNRPA1-207ENST00000559309 ZNF177Q13360 481 aaPredicted RBP15.2■□□□□ 0.02
SNRPA1-207ENST00000559309 FZD5Q13467 585 aa15.2■□□□□ 0.02
SNRPA1-207ENST00000559309 MLF2Q15773 248 aaPredicted RBP15.2■□□□□ 0.02
SNRPA1-207ENST00000559309 MFN1Q8IWA4 741 aa15.2■□□□□ 0.02
SNRPA1-207ENST00000559309 TTC17Q96AE7 1141 aa15.2■□□□□ 0.02
SNRPA1-207ENST00000559309 OLFM3Q96PB7 478 aa15.2■□□□□ 0.02
SNRPA1-207ENST00000559309 PSMB7Q99436 277 aa15.2■□□□□ 0.02
SNRPA1-207ENST00000559309 FEM1AQ9BSK4 669 aa15.2■□□□□ 0.02
SNRPA1-207ENST00000559309 CALN1Q9BXU9 219 aa15.2■□□□□ 0.02
SNRPA1-207ENST00000559309 OSBPL8Q9BZF1 889 aa15.2■□□□□ 0.02
SNRPA1-207ENST00000559309 MAGEH1Q9H213 219 aa15.2■□□□□ 0.02
SNRPA1-207ENST00000559309 DONSONQ9NYP3 566 aa15.2■□□□□ 0.02
SNRPA1-207ENST00000559309 MUTYHQ9UIF7 546 aa15.2■□□□□ 0.02
SNRPA1-207ENST00000559309 STARD13Q9Y3M8 1113 aa15.2■□□□□ 0.02
SNRPA1-207ENST00000559309 NUP205Q92621 2012 aa15.2■□□□□ 0.02
SNRPA1-207ENST00000559309 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.19■□□□□ 0.02
SNRPA1-207ENST00000559309 DCXO43602 365 aa15.19■□□□□ 0.02
SNRPA1-207ENST00000559309 KRT10P13645 584 aa15.19■□□□□ 0.02
SNRPA1-207ENST00000559309 TNNT1P13805 278 aa15.19■□□□□ 0.02
SNRPA1-207ENST00000559309 DGKGP49619 791 aa15.19■□□□□ 0.02
SNRPA1-207ENST00000559309 GALK1P51570 392 aa15.19■□□□□ 0.02
SNRPA1-207ENST00000559309 SLC10A2Q12908 348 aaPredicted RBP15.19■□□□□ 0.02
SNRPA1-207ENST00000559309 DMC1Q14565 340 aa15.19■□□□□ 0.02
SNRPA1-207ENST00000559309 SIX1Q15475 284 aaPredicted RBP15.19■□□□□ 0.02
SNRPA1-207ENST00000559309 GEN1Q17RS7 908 aa15.19■□□□□ 0.02
SNRPA1-207ENST00000559309 PLEKHG6Q3KR16 790 aa15.19■□□□□ 0.02
SNRPA1-207ENST00000559309 C6orf118Q5T5N4 469 aa15.19■□□□□ 0.02
SNRPA1-207ENST00000559309 RWDD4Q6NW29 188 aaKnown RBP15.19■□□□□ 0.02
SNRPA1-207ENST00000559309 TFAP2DQ7Z6R9 452 aa15.19■□□□□ 0.02
SNRPA1-207ENST00000559309 TERB1Q8NA31 727 aa15.19■□□□□ 0.02
SNRPA1-207ENST00000559309 ARHGEF2Q92974 986 aaKnown RBP15.19■□□□□ 0.02
SNRPA1-207ENST00000559309 FATE1Q969F0 183 aa15.19■□□□□ 0.02
SNRPA1-207ENST00000559309 PNKPQ96T60 521 aa15.19■□□□□ 0.02
SNRPA1-207ENST00000559309 DTLQ9NZJ0 730 aa15.19■□□□□ 0.02
SNRPA1-207ENST00000559309 KIAA1522Q9P206 1035 aaPredicted RBP15.19■□□□□ 0.02
SNRPA1-207ENST00000559309 STIM2Q9P246 746 aa15.19■□□□□ 0.02
SNRPA1-207ENST00000559309 GGA2Q9UJY4 613 aa15.19■□□□□ 0.02
SNRPA1-207ENST00000559309 RAD54BQ9Y620 910 aa15.19■□□□□ 0.02
SNRPA1-207ENST00000559309 A0A0D9SEW6 157 aa15.18■□□□□ 0.02
SNRPA1-207ENST00000559309 PRRT4C9JH25 899 aa15.18■□□□□ 0.02
SNRPA1-207ENST00000559309 H0Y626 953 aa15.18■□□□□ 0.02
SNRPA1-207ENST00000559309 K7EQS6 105 aa15.18■□□□□ 0.02
SNRPA1-207ENST00000559309 KCNK3O14649 394 aa15.18■□□□□ 0.02
SNRPA1-207ENST00000559309 MFSD11O43934 449 aa15.18■□□□□ 0.02
SNRPA1-207ENST00000559309 ZNF500O60304 480 aaPredicted RBP15.18■□□□□ 0.02
SNRPA1-207ENST00000559309 CD160O95971 181 aa15.18■□□□□ 0.02
SNRPA1-207ENST00000559309 C7P10643 843 aa15.18■□□□□ 0.02
SNRPA1-207ENST00000559309 PABPC1P11940 636 aaKnown RBP15.18■□□□□ 0.02
SNRPA1-207ENST00000559309 TGM2P21980 687 aa15.18■□□□□ 0.02
SNRPA1-207ENST00000559309 MZF1P28698 734 aaPredicted RBP15.18■□□□□ 0.02
SNRPA1-207ENST00000559309 OR1E1P30953 314 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms