RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 EVLQ9UI08 416 aaPredicted RBP12.9□□□□□ -0.34
SMAD3-208ENST00000558827 STAP1Q9ULZ2 295 aa12.9□□□□□ -0.34
SMAD3-208ENST00000558827 A0A1B0GVM2 712 aa12.89□□□□□ -0.35
SMAD3-208ENST00000558827 A0A1W2PP55 124 aa12.89□□□□□ -0.35
SMAD3-208ENST00000558827 TCAF2A6NFQ2 919 aa12.89□□□□□ -0.35
SMAD3-208ENST00000558827 SNAP91O60641 907 aa12.89□□□□□ -0.35
SMAD3-208ENST00000558827 LSM8O95777 96 aaKnown RBP12.89□□□□□ -0.35
SMAD3-208ENST00000558827 ASLP04424 464 aa12.89□□□□□ -0.35
SMAD3-208ENST00000558827 CYP1A1P04798 512 aaPredicted RBP12.89□□□□□ -0.35
SMAD3-208ENST00000558827 SERPINF2P08697 491 aa12.89□□□□□ -0.35
SMAD3-208ENST00000558827 OXTRP30559 389 aa12.89□□□□□ -0.35
SMAD3-208ENST00000558827 METAP1P53582 386 aa12.89□□□□□ -0.35
SMAD3-208ENST00000558827 HNRNPA1L2Q32P51 320 aaKnown RBP12.89□□□□□ -0.35
SMAD3-208ENST00000558827 SLC25A52Q3SY17 297 aa12.89□□□□□ -0.35
SMAD3-208ENST00000558827 WDR45BQ5MNZ6 344 aa12.89□□□□□ -0.35
SMAD3-208ENST00000558827 DAB2IPQ5VWQ8 1189 aa12.89□□□□□ -0.35
SMAD3-208ENST00000558827 ZNF776Q68DI1 518 aaPredicted RBP12.89□□□□□ -0.35
SMAD3-208ENST00000558827 SLC23A3Q6PIS1 610 aa12.89□□□□□ -0.35
SMAD3-208ENST00000558827 LAYNQ6UX15 382 aa12.89□□□□□ -0.35
SMAD3-208ENST00000558827 METTL3Q86U44 580 aaKnown RBP12.89□□□□□ -0.35
SMAD3-208ENST00000558827 ZDHHC17Q8IUH5 632 aa12.89□□□□□ -0.35
SMAD3-208ENST00000558827 RXFP2Q8WXD0 754 aa12.89□□□□□ -0.35
SMAD3-208ENST00000558827 FOXJ1Q92949 421 aa12.89□□□□□ -0.35
SMAD3-208ENST00000558827 IRX2Q9BZI1 471 aaPredicted RBP12.89□□□□□ -0.35
SMAD3-208ENST00000558827 MUC3BQ9H195 1237 aa12.89□□□□□ -0.35
SMAD3-208ENST00000558827 FBXL12Q9NXK8 326 aa12.89□□□□□ -0.35
SMAD3-208ENST00000558827 ARHGEF38Q9NXL2 777 aa12.89□□□□□ -0.35
SMAD3-208ENST00000558827 TMEM59LQ9UK28 342 aa12.89□□□□□ -0.35
SMAD3-208ENST00000558827 METTL12A8MUP2 240 aa12.88□□□□□ -0.35
SMAD3-208ENST00000558827 TMCO5BA8MYB1 307 aa12.88□□□□□ -0.35
SMAD3-208ENST00000558827 KCNK3O14649 394 aa12.88□□□□□ -0.35
SMAD3-208ENST00000558827 SEMA4FO95754 770 aa12.88□□□□□ -0.35
SMAD3-208ENST00000558827 SRPRAP08240 638 aaKnown RBP12.88□□□□□ -0.35
SMAD3-208ENST00000558827 CST6Q15828 149 aa12.88□□□□□ -0.35
SMAD3-208ENST00000558827 PEAR1Q5VY43 1037 aaPredicted RBP12.88□□□□□ -0.35
SMAD3-208ENST00000558827 MINDY1Q8N5J2 469 aa12.88□□□□□ -0.35
SMAD3-208ENST00000558827 ZNF557Q8N988 423 aaPredicted RBP12.88□□□□□ -0.35
SMAD3-208ENST00000558827 MSANTD4Q8NCY6 345 aa12.88□□□□□ -0.35
SMAD3-208ENST00000558827 CEP76Q8TAP6 659 aa12.88□□□□□ -0.35
SMAD3-208ENST00000558827 PTPRN2Q92932 1015 aa12.88□□□□□ -0.35
SMAD3-208ENST00000558827 ALG14Q96F25 216 aa12.88□□□□□ -0.35
SMAD3-208ENST00000558827 FAM129BQ96TA1 746 aa12.88□□□□□ -0.35
SMAD3-208ENST00000558827 FEM1AQ9BSK4 669 aa12.88□□□□□ -0.35
SMAD3-208ENST00000558827 SPON2Q9BUD6 331 aa12.88□□□□□ -0.35
SMAD3-208ENST00000558827 RSPH9Q9H1X1 276 aaPredicted RBP12.88□□□□□ -0.35
SMAD3-208ENST00000558827 NEUROG2Q9H2A3 272 aa12.88□□□□□ -0.35
SMAD3-208ENST00000558827 PABPC3Q9H361 631 aaKnown RBP12.88□□□□□ -0.35
SMAD3-208ENST00000558827 CAPN10Q9HC96 672 aa12.88□□□□□ -0.35
SMAD3-208ENST00000558827 ADAM22Q9P0K1 906 aa12.88□□□□□ -0.35
SMAD3-208ENST00000558827 VPS28Q9UK41 221 aa12.88□□□□□ -0.35
SMAD3-208ENST00000558827 PCNX2A6NKB5 2137 aa12.88□□□□□ -0.35
SMAD3-208ENST00000558827 CHD8Q9HCK8 2581 aa12.87□□□□□ -0.35
SMAD3-208ENST00000558827 EDDM13A0A1B0GTR0 161 aa12.87□□□□□ -0.35
SMAD3-208ENST00000558827 LRRC10BA6NIK2 292 aa12.87□□□□□ -0.35
SMAD3-208ENST00000558827 K7ERQ8 282 aa12.87□□□□□ -0.35
SMAD3-208ENST00000558827 ARHGAP33O14559 1287 aa12.87□□□□□ -0.35
SMAD3-208ENST00000558827 RNASEH1O60930 286 aaKnown RBP12.87□□□□□ -0.35
SMAD3-208ENST00000558827 RNASEH2AO75792 299 aaKnown RBP12.87□□□□□ -0.35
SMAD3-208ENST00000558827 ENDOD1O94919 500 aa12.87□□□□□ -0.35
SMAD3-208ENST00000558827 TOP3BO95985 862 aaKnown RBP12.87□□□□□ -0.35
SMAD3-208ENST00000558827 MT-CO1P00395 513 aa12.87□□□□□ -0.35
SMAD3-208ENST00000558827 F9P00740 461 aa12.87□□□□□ -0.35
SMAD3-208ENST00000558827 IL1BP01584 269 aa12.87□□□□□ -0.35
SMAD3-208ENST00000558827 RHOCP08134 193 aa12.87□□□□□ -0.35
SMAD3-208ENST00000558827 ADRB1P08588 477 aa12.87□□□□□ -0.35
SMAD3-208ENST00000558827 GNSP15586 552 aa12.87□□□□□ -0.35
SMAD3-208ENST00000558827 MMP8P22894 467 aa12.87□□□□□ -0.35
SMAD3-208ENST00000558827 GLDCP23378 1020 aa12.87□□□□□ -0.35
SMAD3-208ENST00000558827 SLC8A1P32418 973 aa12.87□□□□□ -0.35
SMAD3-208ENST00000558827 CSNK1EP49674 416 aaKnown RBP12.87□□□□□ -0.35
SMAD3-208ENST00000558827 DLG2Q15700 870 aa12.87□□□□□ -0.35
SMAD3-208ENST00000558827 CLEC16AQ2KHT3 1053 aa12.87□□□□□ -0.35
SMAD3-208ENST00000558827 CCDC14Q49A88 953 aa12.87□□□□□ -0.35
SMAD3-208ENST00000558827 TTC31Q49AM3 519 aaPredicted RBP12.87□□□□□ -0.35
SMAD3-208ENST00000558827 BRMS1LQ5PSV4 323 aa12.87□□□□□ -0.35
SMAD3-208ENST00000558827 LINGO4Q6UY18 593 aa12.87□□□□□ -0.35
SMAD3-208ENST00000558827 ZNF677Q86XU0 584 aa12.87□□□□□ -0.35
SMAD3-208ENST00000558827 HDDC3Q8N4P3 179 aa12.87□□□□□ -0.35
SMAD3-208ENST00000558827 OR7D4Q8NG98 312 aa12.87□□□□□ -0.35
SMAD3-208ENST00000558827 NT5C3BQ969T7 300 aa12.87□□□□□ -0.35
SMAD3-208ENST00000558827 NAP1L5Q96NT1 182 aaPredicted RBP12.87□□□□□ -0.35
SMAD3-208ENST00000558827 CAMK1GQ96NX5 476 aa12.87□□□□□ -0.35
SMAD3-208ENST00000558827 ERGIC2Q96RQ1 377 aa12.87□□□□□ -0.35
SMAD3-208ENST00000558827 AGPAT1Q99943 283 aa12.87□□□□□ -0.35
SMAD3-208ENST00000558827 OMDQ99983 421 aa12.87□□□□□ -0.35
SMAD3-208ENST00000558827 NAT10Q9H0A0 1025 aaKnown RBP12.87□□□□□ -0.35
SMAD3-208ENST00000558827 BTBD1Q9H0C5 482 aa12.87□□□□□ -0.35
SMAD3-208ENST00000558827 IL21RQ9HBE5 538 aa12.87□□□□□ -0.35
SMAD3-208ENST00000558827 RRN3Q9NYV6 651 aa12.87□□□□□ -0.35
SMAD3-208ENST00000558827 NCKAP1Q9Y2A7 1128 aa12.87□□□□□ -0.35
SMAD3-208ENST00000558827 ACTL7AQ9Y615 435 aa12.87□□□□□ -0.35
SMAD3-208ENST00000558827 CABIN1Q9Y6J0 2220 aa12.86□□□□□ -0.35
SMAD3-208ENST00000558827 A0A0D9SEW6 157 aa12.86□□□□□ -0.35
SMAD3-208ENST00000558827 A0A1B0GTW7 788 aa12.86□□□□□ -0.35
SMAD3-208ENST00000558827 SPAARA0A1B0GVQ0 90 aa12.86□□□□□ -0.35
SMAD3-208ENST00000558827 A0A1B0GVT2 93 aa12.86□□□□□ -0.35
SMAD3-208ENST00000558827 SYCE3A1L190 88 aa12.86□□□□□ -0.35
SMAD3-208ENST00000558827 E9PAM4 449 aa12.86□□□□□ -0.35
SMAD3-208ENST00000558827 BCAT2O15382 392 aaPredicted RBP12.86□□□□□ -0.35
SMAD3-208ENST00000558827 OPHN1O60890 802 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms