RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 ARHGAP18Q8N392 663 aa13.29□□□□□ -0.28
SMAD3-207ENST00000558763 RNF34Q969K3 372 aa13.29□□□□□ -0.28
SMAD3-207ENST00000558763 ZNF419Q96HQ0 510 aaPredicted RBP13.29□□□□□ -0.28
SMAD3-207ENST00000558763 ZNF576Q9H609 170 aa13.29□□□□□ -0.28
SMAD3-207ENST00000558763 NDFIP2Q9NV92 336 aa13.29□□□□□ -0.28
SMAD3-207ENST00000558763 IGSF9Q9P2J2 1179 aa13.29□□□□□ -0.28
SMAD3-207ENST00000558763 FETUBQ9UGM5 382 aa13.29□□□□□ -0.28
SMAD3-207ENST00000558763 AFF4Q9UHB7 1163 aaKnown RBP13.29□□□□□ -0.28
SMAD3-207ENST00000558763 CHD5Q8TDI0 1954 aa13.29□□□□□ -0.28
SMAD3-207ENST00000558763 EYSQ5T1H1 3165 aa13.29□□□□□ -0.28
SMAD3-207ENST00000558763 PER2O15055 1255 aa13.29□□□□□ -0.28
SMAD3-207ENST00000558763 NCAM2O15394 837 aa13.29□□□□□ -0.28
SMAD3-207ENST00000558763 TGM5O43548 720 aa13.29□□□□□ -0.28
SMAD3-207ENST00000558763 SEC24AO95486 1093 aa13.29□□□□□ -0.28
SMAD3-207ENST00000558763 HTR7P34969 479 aa13.29□□□□□ -0.28
SMAD3-207ENST00000558763 AFMIDQ63HM1 303 aa13.29□□□□□ -0.28
SMAD3-207ENST00000558763 TPGS2Q68CL5 300 aa13.29□□□□□ -0.28
SMAD3-207ENST00000558763 RBM23Q86U06 439 aaKnown RBP13.29□□□□□ -0.28
SMAD3-207ENST00000558763 RIBC1Q8N443 379 aaPredicted RBP13.29□□□□□ -0.28
SMAD3-207ENST00000558763 CCNYQ8ND76 341 aa13.29□□□□□ -0.28
SMAD3-207ENST00000558763 ATXN2LQ8WWM7 1075 aaKnown RBP13.29□□□□□ -0.28
SMAD3-207ENST00000558763 ARHGEF2Q92974 986 aaKnown RBP13.29□□□□□ -0.28
SMAD3-207ENST00000558763 SIGLEC10Q96LC7 697 aa13.29□□□□□ -0.28
SMAD3-207ENST00000558763 SIK2Q9H0K1 926 aa13.29□□□□□ -0.28
SMAD3-207ENST00000558763 EIF2B3Q9NR50 452 aaKnown RBP13.29□□□□□ -0.28
SMAD3-207ENST00000558763 TCRBV9S1A1TA0A576 114 aa13.28□□□□□ -0.28
SMAD3-207ENST00000558763 A6NNZ2 444 aa13.28□□□□□ -0.28
SMAD3-207ENST00000558763 F5H423 210 aaPredicted RBP13.28□□□□□ -0.28
SMAD3-207ENST00000558763 PRRG1O14668 218 aa13.28□□□□□ -0.28
SMAD3-207ENST00000558763 OBSL1O75147 1896 aa13.28□□□□□ -0.28
SMAD3-207ENST00000558763 PIAS1O75925 651 aa13.28□□□□□ -0.28
SMAD3-207ENST00000558763 SRGAP2BP0DMP2 458 aa13.28□□□□□ -0.28
SMAD3-207ENST00000558763 PSMB4P28070 264 aa13.28□□□□□ -0.28
SMAD3-207ENST00000558763 CD68P34810 354 aaPredicted RBP13.28□□□□□ -0.28
SMAD3-207ENST00000558763 SERPINB6P35237 376 aa13.28□□□□□ -0.28
SMAD3-207ENST00000558763 FDFT1P37268 417 aa13.28□□□□□ -0.28
SMAD3-207ENST00000558763 MLLT6P55198 1093 aaPredicted RBP13.28□□□□□ -0.28
SMAD3-207ENST00000558763 MYO9BQ13459 2157 aa13.28□□□□□ -0.28
SMAD3-207ENST00000558763 MPP2Q14168 576 aa13.28□□□□□ -0.28
SMAD3-207ENST00000558763 TUBB8Q3ZCM7 444 aa13.28□□□□□ -0.28
SMAD3-207ENST00000558763 PRPF38BQ5VTL8 546 aaKnown RBP13.28□□□□□ -0.28
SMAD3-207ENST00000558763 ARHGAP36Q6ZRI8 547 aa13.28□□□□□ -0.28
SMAD3-207ENST00000558763 C3orf62Q6ZUJ4 267 aa13.28□□□□□ -0.28
SMAD3-207ENST00000558763 PDZD4Q76G19 769 aaPredicted RBP13.28□□□□□ -0.28
SMAD3-207ENST00000558763 ZNF771Q7L3S4 317 aaPredicted RBP13.28□□□□□ -0.28
SMAD3-207ENST00000558763 ADGRD2Q7Z7M1 963 aa13.28□□□□□ -0.28
SMAD3-207ENST00000558763 NLRP14Q86W24 1093 aa13.28□□□□□ -0.28
SMAD3-207ENST00000558763 FBF1Q8TES7 1133 aa13.28□□□□□ -0.28
SMAD3-207ENST00000558763 CELF6Q96J87 481 aaKnown RBP13.28□□□□□ -0.28
SMAD3-207ENST00000558763 BRD8Q9H0E9 1235 aa13.28□□□□□ -0.28
SMAD3-207ENST00000558763 STMN4Q9H169 189 aaPredicted RBP13.28□□□□□ -0.28
SMAD3-207ENST00000558763 CNOT10Q9H9A5 744 aaKnown RBP13.28□□□□□ -0.28
SMAD3-207ENST00000558763 COMMD8Q9NX08 183 aa13.28□□□□□ -0.28
SMAD3-207ENST00000558763 TBK1Q9UHD2 729 aa13.28□□□□□ -0.28
SMAD3-207ENST00000558763 TTLL3Q9Y4R7 772 aa13.28□□□□□ -0.28
SMAD3-207ENST00000558763 SLC38A8A6NNN8 435 aa13.27□□□□□ -0.28
SMAD3-207ENST00000558763 E9PAM4 449 aa13.27□□□□□ -0.28
SMAD3-207ENST00000558763 MOCS2O96007 188 aaPredicted RBP13.27□□□□□ -0.28
SMAD3-207ENST00000558763 GLUD1P00367 558 aa13.27□□□□□ -0.28
SMAD3-207ENST00000558763 ELF1P32519 619 aa13.27□□□□□ -0.28
SMAD3-207ENST00000558763 PSEN1P49768 467 aa13.27□□□□□ -0.28
SMAD3-207ENST00000558763 TBX4P57082 545 aa13.27□□□□□ -0.28
SMAD3-207ENST00000558763 EFEMP1Q12805 493 aa13.27□□□□□ -0.28
SMAD3-207ENST00000558763 MPP5Q8N3R9 675 aa13.27□□□□□ -0.28
SMAD3-207ENST00000558763 GIPC2Q8TF65 315 aa13.27□□□□□ -0.28
SMAD3-207ENST00000558763 MZB1Q8WU39 189 aa13.27□□□□□ -0.28
SMAD3-207ENST00000558763 TBC1D31Q96DN5 1066 aa13.27□□□□□ -0.28
SMAD3-207ENST00000558763 C1orf74Q96LT6 269 aa13.27□□□□□ -0.28
SMAD3-207ENST00000558763 XPO6Q96QU8 1125 aaKnown RBP13.27□□□□□ -0.28
SMAD3-207ENST00000558763 CCDC77Q9BR77 488 aa13.27□□□□□ -0.28
SMAD3-207ENST00000558763 TRIM56Q9BRZ2 755 aaKnown RBP13.27□□□□□ -0.28
SMAD3-207ENST00000558763 NOL6Q9H6R4 1146 aaKnown RBP13.27□□□□□ -0.28
SMAD3-207ENST00000558763 CCSER2Q9H7U1 834 aa13.27□□□□□ -0.28
SMAD3-207ENST00000558763 SEPT10Q9P0V9 454 aa13.27□□□□□ -0.28
SMAD3-207ENST00000558763 SLC24A2Q9UI40 661 aa13.27□□□□□ -0.28
SMAD3-207ENST00000558763 SRRM3A6NNA2 597 aaPredicted RBP13.27□□□□□ -0.29
SMAD3-207ENST00000558763 SOX1O00570 391 aaPredicted RBP13.27□□□□□ -0.29
SMAD3-207ENST00000558763 FGF10O15520 208 aaPredicted RBP13.27□□□□□ -0.29
SMAD3-207ENST00000558763 CHN1P15882 459 aa13.27□□□□□ -0.29
SMAD3-207ENST00000558763 HMGA1P17096 107 aaKnown RBP13.27□□□□□ -0.29
SMAD3-207ENST00000558763 MX2P20592 715 aa13.27□□□□□ -0.29
SMAD3-207ENST00000558763 CLCN4P51793 760 aa13.27□□□□□ -0.29
SMAD3-207ENST00000558763 RPL10AP62906 217 aaKnown RBP13.27□□□□□ -0.29
SMAD3-207ENST00000558763 CDK16Q00536 496 aa13.27□□□□□ -0.29
SMAD3-207ENST00000558763 TRIP4Q15650 581 aaPredicted RBP13.27□□□□□ -0.29
SMAD3-207ENST00000558763 PARP6Q2NL67 630 aa13.27□□□□□ -0.29
SMAD3-207ENST00000558763 MS4A13Q5J8X5 152 aa13.27□□□□□ -0.29
SMAD3-207ENST00000558763 PDE12Q6L8Q7 609 aaKnown RBP13.27□□□□□ -0.29
SMAD3-207ENST00000558763 RWDD4Q6NW29 188 aaKnown RBP13.27□□□□□ -0.29
SMAD3-207ENST00000558763 TADA2BQ86TJ2 420 aa13.27□□□□□ -0.29
SMAD3-207ENST00000558763 TRABD2AQ86V40 505 aa13.27□□□□□ -0.29
SMAD3-207ENST00000558763 KLHDC8BQ8IXV7 354 aa13.27□□□□□ -0.29
SMAD3-207ENST00000558763 LMAN2LQ9H0V9 348 aa13.27□□□□□ -0.29
SMAD3-207ENST00000558763 XAB2Q9HCS7 855 aaKnown RBP13.27□□□□□ -0.29
SMAD3-207ENST00000558763 TLR8Q9NR97 1041 aaKnown RBP13.27□□□□□ -0.29
SMAD3-207ENST00000558763 ZNF212Q9UDV6 495 aa13.27□□□□□ -0.29
SMAD3-207ENST00000558763 YIPF1Q9Y548 306 aa13.27□□□□□ -0.29
SMAD3-207ENST00000558763 XIRP2A4UGR9 3374 aa13.26□□□□□ -0.29
SMAD3-207ENST00000558763 IGLV3-10A0A075B6K4 115 aa13.26□□□□□ -0.29
SMAD3-207ENST00000558763 ERICH4A6NGS2 130 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms