RNA–Protein interactions for RNA: ENST00000558469.5

CUX1-216, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-216ENST00000558469 MARK1Q9P0L2 795 aa9.88□□□□□ -0.83
CUX1-216ENST00000558469 EFR3BQ9Y2G0 817 aa9.88□□□□□ -0.83
CUX1-216ENST00000558469 TCRBV7S2A1N4TA0A589 114 aa9.87□□□□□ -0.83
CUX1-216ENST00000558469 ARNTLO00327 626 aa9.87□□□□□ -0.83
CUX1-216ENST00000558469 TJP3O95049 919 aa9.87□□□□□ -0.83
CUX1-216ENST00000558469 PENKP01210 267 aaPredicted RBP9.87□□□□□ -0.83
CUX1-216ENST00000558469 FGGP02679 453 aa9.87□□□□□ -0.83
CUX1-216ENST00000558469 BMP1P13497 986 aa9.87□□□□□ -0.83
CUX1-216ENST00000558469 ZFXP17010 805 aaPredicted RBP9.87□□□□□ -0.83
CUX1-216ENST00000558469 SERPINB6P35237 376 aa9.87□□□□□ -0.83
CUX1-216ENST00000558469 TDGQ13569 410 aa9.87□□□□□ -0.83
CUX1-216ENST00000558469 CDH18Q13634 790 aa9.87□□□□□ -0.83
CUX1-216ENST00000558469 PAFAH1B3Q15102 231 aaKnown RBP9.87□□□□□ -0.83
CUX1-216ENST00000558469 LONRF2Q1L5Z9 754 aa9.87□□□□□ -0.83
CUX1-216ENST00000558469 ITPRIPL2Q3MIP1 535 aa9.87□□□□□ -0.83
CUX1-216ENST00000558469 FSCBQ5H9T9 825 aa9.87□□□□□ -0.83
CUX1-216ENST00000558469 NCBP2-AS2Q69YL0 99 aa9.87□□□□□ -0.83
CUX1-216ENST00000558469 SLC9A4Q6AI14 798 aa9.87□□□□□ -0.83
CUX1-216ENST00000558469 NPNTQ6UXI9 565 aa9.87□□□□□ -0.83
CUX1-216ENST00000558469 SLC13A5Q86YT5 568 aaPredicted RBP9.87□□□□□ -0.83
CUX1-216ENST00000558469 RASGEF1CQ8N431 466 aa9.87□□□□□ -0.83
CUX1-216ENST00000558469 CCDC33Q8N5R6 958 aa9.87□□□□□ -0.83
CUX1-216ENST00000558469 NPWQ8N729 165 aa9.87□□□□□ -0.83
CUX1-216ENST00000558469 PLD5Q8N7P1 536 aa9.87□□□□□ -0.83
CUX1-216ENST00000558469 NETO2Q8NC67 525 aa9.87□□□□□ -0.83
CUX1-216ENST00000558469 WFDC5Q8TCV5 224 aa9.87□□□□□ -0.83
CUX1-216ENST00000558469 HAUS1Q96CS2 278 aa9.87□□□□□ -0.83
CUX1-216ENST00000558469 CELF6Q96J87 481 aaKnown RBP9.87□□□□□ -0.83
CUX1-216ENST00000558469 XPO6Q96QU8 1125 aaKnown RBP9.87□□□□□ -0.83
CUX1-216ENST00000558469 RETREG1Q9H6L5 497 aa9.87□□□□□ -0.83
CUX1-216ENST00000558469 PRDM16Q9HAZ2 1276 aa9.87□□□□□ -0.83
CUX1-216ENST00000558469 DONSONQ9NYP3 566 aa9.87□□□□□ -0.83
CUX1-216ENST00000558469 SMARCAL1Q9NZC9 954 aa9.87□□□□□ -0.83
CUX1-216ENST00000558469 SAE1Q9UBE0 346 aaPredicted RBP9.87□□□□□ -0.83
CUX1-216ENST00000558469 ZNF212Q9UDV6 495 aa9.87□□□□□ -0.83
CUX1-216ENST00000558469 CLEC4EQ9ULY5 219 aa9.87□□□□□ -0.83
CUX1-216ENST00000558469 HEY1Q9Y5J3 304 aa9.87□□□□□ -0.83
CUX1-216ENST00000558469 ATG2BQ96BY7 2078 aa9.87□□□□□ -0.83
CUX1-216ENST00000558469 C2orf72A6NCS6 295 aa9.86□□□□□ -0.83
CUX1-216ENST00000558469 PGRMC1O00264 195 aaKnown RBP9.86□□□□□ -0.83
CUX1-216ENST00000558469 DFFAO00273 331 aa9.86□□□□□ -0.83
CUX1-216ENST00000558469 HOXC11O43248 304 aaPredicted RBP9.86□□□□□ -0.83
CUX1-216ENST00000558469 NARSO43776 548 aaKnown RBP9.86□□□□□ -0.83
CUX1-216ENST00000558469 MFSD11O43934 449 aa9.86□□□□□ -0.83
CUX1-216ENST00000558469 CACNG3O60359 315 aa9.86□□□□□ -0.83
CUX1-216ENST00000558469 MAP3K6O95382 1288 aa9.86□□□□□ -0.83
CUX1-216ENST00000558469 RHOCP08134 193 aa9.86□□□□□ -0.83
CUX1-216ENST00000558469 TGM2P21980 687 aa9.86□□□□□ -0.83
CUX1-216ENST00000558469 GJA4P35212 333 aa9.86□□□□□ -0.83
CUX1-216ENST00000558469 MAPKAPK2P49137 400 aa9.86□□□□□ -0.83
CUX1-216ENST00000558469 NUMBP49757 651 aa9.86□□□□□ -0.83
CUX1-216ENST00000558469 GBE1Q04446 702 aa9.86□□□□□ -0.83
CUX1-216ENST00000558469 SLC10A2Q12908 348 aaPredicted RBP9.86□□□□□ -0.83
CUX1-216ENST00000558469 KLF1Q13351 362 aaPredicted RBP9.86□□□□□ -0.83
CUX1-216ENST00000558469 POLD3Q15054 466 aaPredicted RBP9.86□□□□□ -0.83
CUX1-216ENST00000558469 C6orf118Q5T5N4 469 aa9.86□□□□□ -0.83
CUX1-216ENST00000558469 RNF219Q5W0B1 726 aaPredicted RBP9.86□□□□□ -0.83
CUX1-216ENST00000558469 RNF43Q68DV7 783 aa9.86□□□□□ -0.83
CUX1-216ENST00000558469 BBS12Q6ZW61 710 aa9.86□□□□□ -0.83
CUX1-216ENST00000558469 SETD3Q86TU7 594 aaPredicted RBP9.86□□□□□ -0.83
CUX1-216ENST00000558469 C12orf40Q86WS4 652 aa9.86□□□□□ -0.83
CUX1-216ENST00000558469 CREG2Q8IUH2 290 aa9.86□□□□□ -0.83
CUX1-216ENST00000558469 TP53INP2Q8IXH6 220 aa9.86□□□□□ -0.83
CUX1-216ENST00000558469 UMODL1-AS1Q8N2C9 162 aa9.86□□□□□ -0.83
CUX1-216ENST00000558469 LZTR1Q8N653 840 aa9.86□□□□□ -0.83
CUX1-216ENST00000558469 OR52K2Q8NGK3 314 aa9.86□□□□□ -0.83
CUX1-216ENST00000558469 FIBINQ8TAL6 211 aa9.86□□□□□ -0.83
CUX1-216ENST00000558469 ACTRT1Q8TDG2 376 aa9.86□□□□□ -0.83
CUX1-216ENST00000558469 MAIP1Q8WWC4 291 aa9.86□□□□□ -0.83
CUX1-216ENST00000558469 P3H4Q92791 437 aa9.86□□□□□ -0.83
CUX1-216ENST00000558469 NAP1L3Q99457 506 aaPredicted RBP9.86□□□□□ -0.83
CUX1-216ENST00000558469 SLC2A11Q9BYW1 496 aa9.86□□□□□ -0.83
CUX1-216ENST00000558469 SLC39A8Q9C0K1 460 aa9.86□□□□□ -0.83
CUX1-216ENST00000558469 KLC2Q9H0B6 622 aa9.86□□□□□ -0.83
CUX1-216ENST00000558469 NOL6Q9H6R4 1146 aaKnown RBP9.86□□□□□ -0.83
CUX1-216ENST00000558469 RYDENQ9NUL5 291 aaKnown RBP9.86□□□□□ -0.83
CUX1-216ENST00000558469 DNAJC17Q9NVM6 304 aaKnown RBP9.86□□□□□ -0.83
CUX1-216ENST00000558469 DTLQ9NZJ0 730 aa9.86□□□□□ -0.83
CUX1-216ENST00000558469 TTC7AQ9ULT0 858 aaPredicted RBP9.86□□□□□ -0.83
CUX1-216ENST00000558469 TBC1D30Q9Y2I9 924 aa9.86□□□□□ -0.83
CUX1-216ENST00000558469 MYO18AQ92614 2054 aaKnown RBP9.86□□□□□ -0.83
CUX1-216ENST00000558469 ANKRD36A6QL64 1941 aa9.86□□□□□ -0.83
CUX1-216ENST00000558469 A0A0D9SEW6 157 aa9.85□□□□□ -0.83
CUX1-216ENST00000558469 ILVBLA1L0T0 632 aa9.85□□□□□ -0.83
CUX1-216ENST00000558469 RASA4BC9J798 803 aa9.85□□□□□ -0.83
CUX1-216ENST00000558469 APOC4-APOC2K7ER74 178 aa9.85□□□□□ -0.83
CUX1-216ENST00000558469 TRIM24O15164 1050 aa9.85□□□□□ -0.83
CUX1-216ENST00000558469 RASA4O43374 803 aa9.85□□□□□ -0.83
CUX1-216ENST00000558469 RAMP2O60895 175 aa9.85□□□□□ -0.83
CUX1-216ENST00000558469 TULP3O75386 442 aa9.85□□□□□ -0.83
CUX1-216ENST00000558469 APOC2P02655 101 aa9.85□□□□□ -0.83
CUX1-216ENST00000558469 SRFP11831 508 aa9.85□□□□□ -0.83
CUX1-216ENST00000558469 PECAM1P16284 738 aaPredicted RBP9.85□□□□□ -0.83
CUX1-216ENST00000558469 MZF1P28698 734 aaPredicted RBP9.85□□□□□ -0.83
CUX1-216ENST00000558469 CD70P32970 193 aa9.85□□□□□ -0.83
CUX1-216ENST00000558469 PAFAH1B1P43034 410 aa9.85□□□□□ -0.83
CUX1-216ENST00000558469 SLC6A11P48066 632 aa9.85□□□□□ -0.83
CUX1-216ENST00000558469 SOX9P48436 509 aa9.85□□□□□ -0.83
CUX1-216ENST00000558469 NR2C2P49116 596 aa9.85□□□□□ -0.83
CUX1-216ENST00000558469 DGKGP49619 791 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms