RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 ZBTB9Q96C00 473 aa10.65□□□□□ -0.7
TPM1-212ENST00000558347 FAM129AQ9BZQ8 928 aa10.65□□□□□ -0.7
TPM1-212ENST00000558347 THAP2Q9H0W7 228 aa10.65□□□□□ -0.7
TPM1-212ENST00000558347 EBF1Q9UH73 591 aa10.65□□□□□ -0.7
TPM1-212ENST00000558347 YJEFN3A6XGL0 299 aa10.64□□□□□ -0.71
TPM1-212ENST00000558347 E7ENQ6 273 aa10.64□□□□□ -0.71
TPM1-212ENST00000558347 M0QYV0 167 aa10.64□□□□□ -0.71
TPM1-212ENST00000558347 SGK1O00141 431 aa10.64□□□□□ -0.71
TPM1-212ENST00000558347 AXIN1O15169 862 aa10.64□□□□□ -0.71
TPM1-212ENST00000558347 PPFIA2O75334 1257 aa10.64□□□□□ -0.71
TPM1-212ENST00000558347 KLF8O95600 359 aaPredicted RBP10.64□□□□□ -0.71
TPM1-212ENST00000558347 APBB3O95704 486 aa10.64□□□□□ -0.71
TPM1-212ENST00000558347 RETP07949 1114 aa10.64□□□□□ -0.71
TPM1-212ENST00000558347 TYRP14679 529 aa10.64□□□□□ -0.71
TPM1-212ENST00000558347 MMP8P22894 467 aa10.64□□□□□ -0.71
TPM1-212ENST00000558347 LSP1P33241 339 aa10.64□□□□□ -0.71
TPM1-212ENST00000558347 MDH1P40925 334 aaKnown RBP10.64□□□□□ -0.71
TPM1-212ENST00000558347 GPD2P43304 727 aa10.64□□□□□ -0.71
TPM1-212ENST00000558347 TNFRSF4P43489 277 aa10.64□□□□□ -0.71
TPM1-212ENST00000558347 RGS7P49802 495 aa10.64□□□□□ -0.71
TPM1-212ENST00000558347 GSCP56915 257 aaPredicted RBP10.64□□□□□ -0.71
TPM1-212ENST00000558347 RNASE9P60153 205 aaKnown RBP10.64□□□□□ -0.71
TPM1-212ENST00000558347 MRPS21P82921 87 aaKnown RBP10.64□□□□□ -0.71
TPM1-212ENST00000558347 PTP4A2Q12974 167 aa10.64□□□□□ -0.71
TPM1-212ENST00000558347 UAP1Q16222 522 aaPredicted RBP10.64□□□□□ -0.71
TPM1-212ENST00000558347 CEP85LQ5SZL2 805 aa10.64□□□□□ -0.71
TPM1-212ENST00000558347 PMF1Q6P1K2 205 aa10.64□□□□□ -0.71
TPM1-212ENST00000558347 CROCCP2Q86T23 111 aa10.64□□□□□ -0.71
TPM1-212ENST00000558347 KBTBD6Q86V97 674 aa10.64□□□□□ -0.71
TPM1-212ENST00000558347 DNAAF5Q86Y56 855 aa10.64□□□□□ -0.71
TPM1-212ENST00000558347 PASD1Q8IV76 773 aa10.64□□□□□ -0.71
TPM1-212ENST00000558347 ARHGAP18Q8N392 663 aa10.64□□□□□ -0.71
TPM1-212ENST00000558347 UBL4BQ8N7F7 174 aa10.64□□□□□ -0.71
TPM1-212ENST00000558347 TERB1Q8NA31 727 aa10.64□□□□□ -0.71
TPM1-212ENST00000558347 TSTD1Q8NFU3 115 aa10.64□□□□□ -0.71
TPM1-212ENST00000558347 STK32AQ8WU08 396 aa10.64□□□□□ -0.71
TPM1-212ENST00000558347 KCTD13Q8WZ19 329 aa10.64□□□□□ -0.71
TPM1-212ENST00000558347 BHMTQ93088 406 aa10.64□□□□□ -0.71
TPM1-212ENST00000558347 ARHGEF26Q96DR7 871 aa10.64□□□□□ -0.71
TPM1-212ENST00000558347 CDK5RAP1Q96SZ6 601 aaKnown RBP10.64□□□□□ -0.71
TPM1-212ENST00000558347 BBS2Q9BXC9 721 aa10.64□□□□□ -0.71
TPM1-212ENST00000558347 AP1M1Q9BXS5 423 aa10.64□□□□□ -0.71
TPM1-212ENST00000558347 TPSD1Q9BZJ3 242 aa10.64□□□□□ -0.71
TPM1-212ENST00000558347 DDX47Q9H0S4 455 aaKnown RBP10.64□□□□□ -0.71
TPM1-212ENST00000558347 GOLPH3Q9H4A6 298 aa10.64□□□□□ -0.71
TPM1-212ENST00000558347 LRRC4Q9HBW1 653 aa10.64□□□□□ -0.71
TPM1-212ENST00000558347 MARK1Q9P0L2 795 aa10.64□□□□□ -0.71
TPM1-212ENST00000558347 MARCH2Q9P0N8 246 aa10.64□□□□□ -0.71
TPM1-212ENST00000558347 DEC1Q9P2X7 70 aa10.64□□□□□ -0.71
TPM1-212ENST00000558347 HCN2Q9UL51 889 aa10.64□□□□□ -0.71
TPM1-212ENST00000558347 USP18Q9UMW8 372 aa10.64□□□□□ -0.71
TPM1-212ENST00000558347 SPAG17Q6Q759 2223 aa10.64□□□□□ -0.71
TPM1-212ENST00000558347 SLC12A8A0AV02 714 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 TBC1D3BA6NDS4 549 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 PIK3R2O00459 728 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 NDUFAB1O14561 156 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 DCLK1O15075 740 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 CACNG3O60359 315 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 ADAM23O75077 832 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 FGGP02679 453 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 CALB1P05937 261 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 LCP1P13796 627 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 ABCB4P21439 1286 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 CORO1AP31146 461 aaKnown RBP10.63□□□□□ -0.71
TPM1-212ENST00000558347 GABRB2P47870 512 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 DGKEP52429 567 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 DAOAP59103 153 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 COG7P83436 770 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 PDCLQ13371 301 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 CRY1Q16526 586 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 DUPD1Q68J44 220 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 TMC3Q7Z5M5 1100 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 YTHDF3Q7Z739 585 aaKnown RBP10.63□□□□□ -0.71
TPM1-212ENST00000558347 RASSF3Q86WH2 238 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 ERICH1Q86X53 443 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 SIX6OS1Q8N1H7 587 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 SH2D3CQ8N5H7 860 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 MDGA1Q8NFP4 955 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 CLEC4CQ8WTT0 213 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 SLC35F5Q8WV83 523 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 EDEM1Q92611 657 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 ZNF653Q96CK0 615 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 TXLNGYQ9BZA5 131 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 OSGEPQ9NPF4 335 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 DNAJC17Q9NVM6 304 aaKnown RBP10.63□□□□□ -0.71
TPM1-212ENST00000558347 PLK2Q9NYY3 685 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 ADAM22Q9P0K1 906 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 UVRAGQ9P2Y5 699 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 CNOT8Q9UFF9 292 aaKnown RBP10.63□□□□□ -0.71
TPM1-212ENST00000558347 AMACRQ9UHK6 382 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 AGO1Q9UL18 857 aaKnown RBP10.63□□□□□ -0.71
TPM1-212ENST00000558347 STRIP2Q9ULQ0 834 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.63□□□□□ -0.71
TPM1-212ENST00000558347 FAM169AQ9Y6X4 670 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 CEP250Q9BV73 2442 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 TTI1O43156 1089 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 DAPK3O43293 454 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 PHF2O75151 1096 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 CISD3P0C7P0 127 aa10.63□□□□□ -0.71
TPM1-212ENST00000558347 CTNNA2P26232 953 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms