RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 GRB10Q13322 594 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 SDHAF4Q5VUM1 108 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 CYP2W1Q8TAV3 490 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 KLHL32Q96NJ5 620 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 CRAMP1Q96RY5 1269 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 SPACA6W5XKT8 324 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 SLCO1B7G3V0H7 640 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 KCNJ2P63252 427 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 RHAGQ02094 409 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 LAMTOR4Q0VGL1 99 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 TNS3Q68CZ2 1445 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 DSG4Q86SJ6 1040 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 ZDHHC13Q8IUH4 622 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 RXFP2Q8WXD0 754 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 MROH8Q9H579 483 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 NMRK1Q9NWW6 199 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 PRDM4Q9UKN5 801 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 PCDHB12Q9Y5F1 795 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 KPNA3O00505 521 aaPredicted RBP14.2□□□□□ -0.14
SPG11-210ENST00000558319 IFNA14P01570 189 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 CDH3P22223 829 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 CDK16Q00536 496 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 LPIN1Q14693 890 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 ERO1BQ86YB8 467 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 LGI2Q8N0V4 545 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 PRRG3Q9BZD7 231 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 PHACTR1Q9C0D0 580 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 RPRD1BQ9NQG5 326 aaKnown RBP14.2□□□□□ -0.14
SPG11-210ENST00000558319 KRT36O76013 467 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 GLP2RO95838 553 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 CNPP09543 421 aaKnown RBP14.2□□□□□ -0.14
SPG11-210ENST00000558319 ANXA11P50995 505 aaKnown RBP14.2□□□□□ -0.14
SPG11-210ENST00000558319 BTG3Q14201 252 aaPredicted RBP14.2□□□□□ -0.14
SPG11-210ENST00000558319 PREPLQ4J6C6 727 aaPredicted RBP14.2□□□□□ -0.14
SPG11-210ENST00000558319 MIIPQ5JXC2 388 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 MPZL3Q6UWV2 235 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 ILDR2Q71H61 639 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 C8orf59Q8N0T1 100 aaPredicted RBP14.2□□□□□ -0.14
SPG11-210ENST00000558319 TSEN2Q8NCE0 465 aaKnown RBP14.2□□□□□ -0.14
SPG11-210ENST00000558319 ELOVL6Q9H5J4 265 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 CERS4Q9HA82 394 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 NYAP2Q9P242 653 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 UBQLN1Q9UMX0 589 aaKnown RBP14.2□□□□□ -0.14
SPG11-210ENST00000558319 AAR2Q9Y312 384 aaKnown RBP14.2□□□□□ -0.14
SPG11-210ENST00000558319 LYVE1Q9Y5Y7 322 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 SNCAIPQ9Y6H5 919 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 KDM6AO15550 1401 aaPredicted RBP14.2□□□□□ -0.14
SPG11-210ENST00000558319 NPY2RP49146 381 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 CCL23P55773 120 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 MADCAM1Q13477 382 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 RABL6Q3YEC7 729 aaPredicted RBP14.2□□□□□ -0.14
SPG11-210ENST00000558319 RNASE12Q5GAN4 147 aaKnown RBP14.2□□□□□ -0.14
SPG11-210ENST00000558319 TTC7BQ86TV6 843 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 SLC5A5Q92911 643 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 PDGFCQ9NRA1 345 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 SOHLH2Q9NX45 425 aa14.2□□□□□ -0.14
SPG11-210ENST00000558319 DDTLA6NHG4 134 aaPredicted RBP14.19□□□□□ -0.14
SPG11-210ENST00000558319 CCDC85CA6NKD9 419 aa14.19□□□□□ -0.14
SPG11-210ENST00000558319 EIF3DO15371 548 aaKnown RBP eCLIP14.19□□□□□ -0.14
SPG11-210ENST00000558319 KHDRBS3O75525 346 aaKnown RBP14.19□□□□□ -0.14
SPG11-210ENST00000558319 AMPD1P23109 780 aa14.19□□□□□ -0.14
SPG11-210ENST00000558319 QPRTQ15274 297 aa14.19□□□□□ -0.14
SPG11-210ENST00000558319 GSTA3Q16772 222 aa14.19□□□□□ -0.14
SPG11-210ENST00000558319 ZNF571Q7Z3V5 609 aaPredicted RBP14.19□□□□□ -0.14
SPG11-210ENST00000558319 R3HCC1LQ7Z5L2 792 aaKnown RBP14.19□□□□□ -0.14
SPG11-210ENST00000558319 TMC3Q7Z5M5 1100 aa14.19□□□□□ -0.14
SPG11-210ENST00000558319 ZNF276Q8N554 614 aa14.19□□□□□ -0.14
SPG11-210ENST00000558319 POMKQ9H5K3 350 aa14.19□□□□□ -0.14
SPG11-210ENST00000558319 GTF3C4Q9UKN8 822 aa14.19□□□□□ -0.14
SPG11-210ENST00000558319 COG5Q9UP83 839 aa14.19□□□□□ -0.14
SPG11-210ENST00000558319 PPP2R3BQ9Y5P8 575 aa14.19□□□□□ -0.14
SPG11-210ENST00000558319 IFRD1O00458 451 aaPredicted RBP14.19□□□□□ -0.14
SPG11-210ENST00000558319 VCLP18206 1134 aa14.19□□□□□ -0.14
SPG11-210ENST00000558319 BDNFP23560 247 aa14.19□□□□□ -0.14
SPG11-210ENST00000558319 ELK3P41970 407 aa14.19□□□□□ -0.14
SPG11-210ENST00000558319 BCAP31P51572 246 aa14.19□□□□□ -0.14
SPG11-210ENST00000558319 CCSAPQ6IQ19 270 aaPredicted RBP14.19□□□□□ -0.14
SPG11-210ENST00000558319 MILR1Q7Z6M3 343 aa14.19□□□□□ -0.14
SPG11-210ENST00000558319 CHST13Q8NET6 341 aa14.19□□□□□ -0.14
SPG11-210ENST00000558319 ATXN2LQ8WWM7 1075 aaKnown RBP14.19□□□□□ -0.14
SPG11-210ENST00000558319 ZBTB45Q96K62 511 aaPredicted RBP14.19□□□□□ -0.14
SPG11-210ENST00000558319 ACTR8Q9H981 624 aa14.19□□□□□ -0.14
SPG11-210ENST00000558319 PXMP2Q9NR77 195 aa14.19□□□□□ -0.14
SPG11-210ENST00000558319 PRKAG3Q9UGI9 489 aa14.19□□□□□ -0.14
SPG11-210ENST00000558319 SLC24A2Q9UI40 661 aa14.19□□□□□ -0.14
SPG11-210ENST00000558319 LNPEPQ9UIQ6 1025 aa14.19□□□□□ -0.14
SPG11-210ENST00000558319 VANGL2Q9ULK5 521 aa14.19□□□□□ -0.14
SPG11-210ENST00000558319 FAM25EA8MYX2 175 aa14.19□□□□□ -0.14
SPG11-210ENST00000558319 TFECO14948 347 aaPredicted RBP14.19□□□□□ -0.14
SPG11-210ENST00000558319 PIAS1O75925 651 aa14.19□□□□□ -0.14
SPG11-210ENST00000558319 CYP11B1P15538 503 aa14.19□□□□□ -0.14
SPG11-210ENST00000558319 IL12AP29459 219 aa14.19□□□□□ -0.14
SPG11-210ENST00000558319 TTMPQ5BVD1 217 aa14.19□□□□□ -0.14
SPG11-210ENST00000558319 OLFML2AQ68BL7 652 aa14.19□□□□□ -0.14
SPG11-210ENST00000558319 AADACL2Q6P093 401 aa14.19□□□□□ -0.14
SPG11-210ENST00000558319 SETD9Q8NE22 299 aa14.19□□□□□ -0.14
SPG11-210ENST00000558319 TIPINQ9BVW5 301 aa14.19□□□□□ -0.14
SPG11-210ENST00000558319 RBM22Q9NW64 420 aaKnown RBP eCLIP14.19□□□□□ -0.14
SPG11-210ENST00000558319 ETS1P14921 441 aa14.19□□□□□ -0.14
SPG11-210ENST00000558319 RRM1P23921 792 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms