RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 MTDHQ86UE4 582 aaKnown RBP8.52□□□□□ -1.05
SPG11-209ENST00000558253 RASAL3Q86YV0 1011 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 ZNF567Q8N184 647 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 ARHGAP18Q8N392 663 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 TMEM130Q8N3G9 435 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 TAB3Q8N5C8 712 aaPredicted RBP8.52□□□□□ -1.05
SPG11-209ENST00000558253 GSTCDQ8NEC7 633 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 PPP4R1Q8TF05 950 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 SKA1Q96BD8 255 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 LGMNQ99538 433 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 SMOQ99835 787 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 BTBD10Q9BSF8 475 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 GBA3Q9H227 469 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 CATSPERBQ9H7T0 1116 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 EBF2Q9HAK2 575 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 PLAC1Q9HBJ0 212 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 WDR6Q9NNW5 1121 aaKnown RBP8.52□□□□□ -1.05
SPG11-209ENST00000558253 CASS4Q9NQ75 786 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 CRTAC1Q9NQ79 661 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 PIGVQ9NUD9 493 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.52□□□□□ -1.05
SPG11-209ENST00000558253 DDIT4Q9NX09 232 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 ZFATQ9P243 1243 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 KLHL8Q9P2G9 620 aaPredicted RBP8.52□□□□□ -1.05
SPG11-209ENST00000558253 APOBEC2Q9Y235 224 aaKnown RBP8.52□□□□□ -1.05
SPG11-209ENST00000558253 ANKRD6Q9Y2G4 727 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 MGAMO43451 1857 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.51□□□□□ -1.05
SPG11-209ENST00000558253 A0A0G2JND7 137 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 WDR27A2RRH5 827 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 WDR91A4D1P6 747 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 HHLA1C9JL84 531 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 CFAP99D6REC4 459 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 SEPT4O43236 478 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 CREB3O43889 395 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 CACNG3O60359 315 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 ANXA9O76027 345 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 KLHL2O95198 593 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 ALDH1A1P00352 501 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 KRT16P08779 473 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 CSH1P0DML2 217 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 CSH2P0DML3 217 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 T-ENOLP0DO92 83 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 RARBP10826 455 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 ESRRAP11474 423 aaPredicted RBP8.51□□□□□ -1.05
SPG11-209ENST00000558253 COL6A1P12109 1028 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 COL6A2P12110 1019 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 CYBAP13498 195 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 BGNP21810 368 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 PTPN3P26045 913 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 CST5P28325 142 aaPredicted RBP8.51□□□□□ -1.05
SPG11-209ENST00000558253 GCKP35557 465 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 MLH1P40692 756 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 SERPINB8P50452 374 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 ATXN1P54253 815 aaKnown RBP8.51□□□□□ -1.05
SPG11-209ENST00000558253 BEX3Q00994 111 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 OCRLQ01968 901 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 MGAT3Q09327 533 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 ASPHQ12797 758 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 TUSC3Q13454 348 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 PPP2R5DQ14738 602 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 TEX44Q53QW1 395 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 FAXCQ5TGI0 409 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 MROH9Q5TGP6 573 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 SYPL2Q5VXT5 272 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 KCTD11Q693B1 232 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 RGMBQ6NW40 437 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 CEP57Q86XR8 500 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 ENDOVQ8N8Q3 282 aaKnown RBP8.51□□□□□ -1.05
SPG11-209ENST00000558253 PCSK9Q8NBP7 692 aaKnown RBP8.51□□□□□ -1.05
SPG11-209ENST00000558253 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.51□□□□□ -1.05
SPG11-209ENST00000558253 PPP1R14CQ8TAE6 165 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 RDH11Q8TC12 318 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 RSPH1Q8WYR4 309 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 SLC7A6OSQ96CW6 309 aaPredicted RBP8.51□□□□□ -1.05
SPG11-209ENST00000558253 CERS2Q96G23 380 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 PCED1BQ96HM7 432 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 RSRC1Q96IZ7 334 aaKnown RBP8.51□□□□□ -1.05
SPG11-209ENST00000558253 C1orf74Q96LT6 269 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 GAD1Q99259 594 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 TBC1D10AQ9BXI6 508 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 TMEM120AQ9BXJ8 343 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 SEZ6LQ9BYH1 1024 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 C1orf21Q9H246 121 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 RETREG1Q9H6L5 497 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 DCLRE1BQ9H816 532 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 GOLGA2P5Q9HBQ8 144 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 BATF3Q9NR55 127 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 ABCC13Q9NSE7 274 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 MRGBPQ9NV56 204 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 KANSL3Q9P2N6 904 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 OR12D3Q9UGF7 316 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 VANGL2Q9ULK5 521 aa8.51□□□□□ -1.05
SPG11-209ENST00000558253 MYBPHLA2RUH7 354 aa8.5□□□□□ -1.05
SPG11-209ENST00000558253 YJEFN3A6XGL0 299 aa8.5□□□□□ -1.05
SPG11-209ENST00000558253 TMEM114B3SHH9 223 aa8.5□□□□□ -1.05
SPG11-209ENST00000558253 CLDN5O00501 218 aa8.5□□□□□ -1.05
SPG11-209ENST00000558253 NRG2O14511 850 aaPredicted RBP8.5□□□□□ -1.05
SPG11-209ENST00000558253 NRP1O14786 923 aa8.5□□□□□ -1.05
SPG11-209ENST00000558253 GYG2O15488 501 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms