RNA–Protein interactions for RNA: ENST00000557933.5

LDLR-205, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LDLR, Length 2,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-205ENST00000557933 LOXHD1Q8IVV2 1947 aa12.62□□□□□ -0.39
LDLR-205ENST00000557933 GLTPD2A6NH11 291 aa12.62□□□□□ -0.39
LDLR-205ENST00000557933 TPST1O60507 370 aa12.62□□□□□ -0.39
LDLR-205ENST00000557933 CCNT2O60583 730 aaKnown RBP12.62□□□□□ -0.39
LDLR-205ENST00000557933 SEC24DO94855 1032 aaPredicted RBP12.62□□□□□ -0.39
LDLR-205ENST00000557933 PABPC4LP0CB38 370 aaKnown RBP12.62□□□□□ -0.39
LDLR-205ENST00000557933 FAM200BP0CF97 657 aa12.62□□□□□ -0.39
LDLR-205ENST00000557933 L1CAMP32004 1257 aa12.62□□□□□ -0.39
LDLR-205ENST00000557933 PLK1P53350 603 aa12.62□□□□□ -0.39
LDLR-205ENST00000557933 TREML2Q5T2D2 321 aa12.62□□□□□ -0.39
LDLR-205ENST00000557933 DSELQ8IZU8 1212 aa12.62□□□□□ -0.39
LDLR-205ENST00000557933 REPS2Q8NFH8 660 aa12.62□□□□□ -0.39
LDLR-205ENST00000557933 USP33Q8TEY7 942 aa12.62□□□□□ -0.39
LDLR-205ENST00000557933 HTR3CQ8WXA8 447 aa12.62□□□□□ -0.39
LDLR-205ENST00000557933 CMTM5Q96DZ9 223 aa12.62□□□□□ -0.39
LDLR-205ENST00000557933 DCUN1D5Q9BTE7 237 aa12.62□□□□□ -0.39
LDLR-205ENST00000557933 MAF1Q9H063 256 aa12.62□□□□□ -0.39
LDLR-205ENST00000557933 GPAMQ9HCL2 828 aa12.62□□□□□ -0.39
LDLR-205ENST00000557933 PDGFCQ9NRA1 345 aa12.62□□□□□ -0.39
LDLR-205ENST00000557933 C20orf96Q9NUD7 363 aaPredicted RBP12.62□□□□□ -0.39
LDLR-205ENST00000557933 MTMR10Q9NXD2 777 aa12.62□□□□□ -0.39
LDLR-205ENST00000557933 A0A0G2JMZ2 1700 aa12.62□□□□□ -0.39
LDLR-205ENST00000557933 MGAMO43451 1857 aa12.62□□□□□ -0.39
LDLR-205ENST00000557933 A0A096LPK6 155 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 MAFO75444 373 aaPredicted RBP12.61□□□□□ -0.39
LDLR-205ENST00000557933 KLHL2O95198 593 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 TFPTP0C1Z6 253 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 PIK3R1P27986 724 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 EPHX2P34913 555 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 LSM12Q3MHD2 195 aaKnown RBP12.61□□□□□ -0.39
LDLR-205ENST00000557933 FSTL4Q6MZW2 842 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 OLFML1Q6UWY5 402 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 ZPBP2Q6X784 338 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 KBTBD6Q86V97 674 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 RNF135Q8IUD6 432 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 MYO1HQ8N1T3 1032 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 TTC16Q8NEE8 873 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 C18orf25Q96B23 403 aaPredicted RBP12.61□□□□□ -0.39
LDLR-205ENST00000557933 TBCBQ99426 244 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 CYP4F12Q9HCS2 524 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 MOCS1Q9NZB8 636 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 AKT3Q9Y243 479 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 SOCS7O14512 581 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 GLRA3O75311 464 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 ENDOD1O94919 500 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 ASLP04424 464 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 SNAPC2Q13487 334 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 TARBP2Q15633 366 aaKnown RBP12.61□□□□□ -0.39
LDLR-205ENST00000557933 SLC10A6Q3KNW5 377 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 KIF12Q96FN5 646 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 P2RY11Q96G91 374 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 OLFM3Q96PB7 478 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 GATA5Q9BWX5 397 aaPredicted RBP12.61□□□□□ -0.39
LDLR-205ENST00000557933 TASP1Q9H6P5 420 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 CAAP1Q9H8G2 361 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 PNPLA8Q9NP80 782 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 CHRAC1Q9NRG0 131 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 HESX1Q9UBX0 185 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 COMMD3-BMI1R4GMX3 469 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 IQCA1LA6NCM1 817 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 ZBTB42B2RXF5 422 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 TRDMT1O14717 391 aaKnown RBP12.61□□□□□ -0.39
LDLR-205ENST00000557933 HNRNPLP14866 589 aaKnown RBP eCLIP12.61□□□□□ -0.39
LDLR-205ENST00000557933 UGT1A6P19224 532 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 IGFBP6P24592 240 aaPredicted RBP12.61□□□□□ -0.39
LDLR-205ENST00000557933 LMO2P25791 158 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 GNL1P36915 607 aaPredicted RBP12.61□□□□□ -0.39
LDLR-205ENST00000557933 MYBPC3Q14896 1274 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 NCBP2-AS2Q69YL0 99 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 GK5Q6ZS86 529 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 RAB3IL1Q8TBN0 382 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 CDHR1Q96JP9 859 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 HAPLN3Q96S86 360 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 SLC4A5Q9BY07 1137 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 PRDM12Q9H4Q4 367 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 IL1RL2Q9HB29 575 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 GOLGA2P5Q9HBQ8 144 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 PTPRFP10586 1907 aa12.61□□□□□ -0.39
LDLR-205ENST00000557933 ATP6AP2A0A1C7CYW4 349 aa12.6□□□□□ -0.39
LDLR-205ENST00000557933 MAFGO15525 162 aa12.6□□□□□ -0.39
LDLR-205ENST00000557933 ATP6AP2O75787 350 aa12.6□□□□□ -0.39
LDLR-205ENST00000557933 FBXO21O94952 628 aa12.6□□□□□ -0.39
LDLR-205ENST00000557933 PIGNO95427 931 aa12.6□□□□□ -0.39
LDLR-205ENST00000557933 CLIC3O95833 236 aa12.6□□□□□ -0.39
LDLR-205ENST00000557933 STT3AP46977 705 aa12.6□□□□□ -0.39
LDLR-205ENST00000557933 CXCR3P49682 368 aa12.6□□□□□ -0.39
LDLR-205ENST00000557933 MTTPP55157 894 aa12.6□□□□□ -0.39
LDLR-205ENST00000557933 MAP7Q14244 749 aa12.6□□□□□ -0.39
LDLR-205ENST00000557933 DCAF6Q58WW2 860 aa12.6□□□□□ -0.39
LDLR-205ENST00000557933 IL23RQ5VWK5 629 aa12.6□□□□□ -0.39
LDLR-205ENST00000557933 ARCQ7LC44 396 aa12.6□□□□□ -0.39
LDLR-205ENST00000557933 CDKL2Q92772 493 aa12.6□□□□□ -0.39
LDLR-205ENST00000557933 C12orf42Q96LP6 360 aa12.6□□□□□ -0.39
LDLR-205ENST00000557933 PRICKLE1Q96MT3 831 aaPredicted RBP12.6□□□□□ -0.39
LDLR-205ENST00000557933 BCO2Q9BYV7 579 aa12.6□□□□□ -0.39
LDLR-205ENST00000557933 ATXN3LQ9H3M9 355 aa12.6□□□□□ -0.39
LDLR-205ENST00000557933 TMEM134Q9H6X4 195 aa12.6□□□□□ -0.39
LDLR-205ENST00000557933 IARS2Q9NSE4 1012 aaKnown RBP12.6□□□□□ -0.39
LDLR-205ENST00000557933 GGA3Q9NZ52 723 aa12.6□□□□□ -0.39
LDLR-205ENST00000557933 KLK14Q9P0G3 267 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms