RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 PGAP3Q96FM1 320 aaPredicted RBP11.79□□□□□ -0.52
LINC00648-204ENST00000557749 ACOX2Q99424 681 aa11.79□□□□□ -0.52
LINC00648-204ENST00000557749 BPIFA3Q9BQP9 254 aa11.79□□□□□ -0.52
LINC00648-204ENST00000557749 NUP58Q9BVL2 599 aa11.79□□□□□ -0.52
LINC00648-204ENST00000557749 VPS16Q9H269 839 aa11.79□□□□□ -0.52
LINC00648-204ENST00000557749 TMEM245Q9H330 911 aa11.79□□□□□ -0.52
LINC00648-204ENST00000557749 CD248Q9HCU0 757 aa11.79□□□□□ -0.52
LINC00648-204ENST00000557749 ZDHHC4Q9NPG8 344 aa11.79□□□□□ -0.52
LINC00648-204ENST00000557749 ACP6Q9NPH0 428 aa11.79□□□□□ -0.52
LINC00648-204ENST00000557749 TMEM9BQ9NQ34 198 aa11.79□□□□□ -0.52
LINC00648-204ENST00000557749 ITM2CQ9NQX7 267 aa11.79□□□□□ -0.52
LINC00648-204ENST00000557749 FANCLQ9NW38 375 aa11.79□□□□□ -0.52
LINC00648-204ENST00000557749 STIM2Q9P246 746 aa11.79□□□□□ -0.52
LINC00648-204ENST00000557749 USP36Q9P275 1121 aaKnown RBP11.79□□□□□ -0.52
LINC00648-204ENST00000557749 LIMA1Q9UHB6 759 aaKnown RBP11.79□□□□□ -0.52
LINC00648-204ENST00000557749 CYTH4Q9UIA0 394 aa11.79□□□□□ -0.52
LINC00648-204ENST00000557749 HCN2Q9UL51 889 aa11.79□□□□□ -0.52
LINC00648-204ENST00000557749 CYP8B1Q9UNU6 501 aa11.79□□□□□ -0.52
LINC00648-204ENST00000557749 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.78□□□□□ -0.52
LINC00648-204ENST00000557749 LRRC10BA6NIK2 292 aa11.78□□□□□ -0.52
LINC00648-204ENST00000557749 M0QYT0 321 aa11.78□□□□□ -0.52
LINC00648-204ENST00000557749 CLDN11O75508 207 aa11.78□□□□□ -0.52
LINC00648-204ENST00000557749 DNTTP04053 509 aa11.78□□□□□ -0.52
LINC00648-204ENST00000557749 ERBB2P04626 1255 aa11.78□□□□□ -0.52
LINC00648-204ENST00000557749 HOXC13P31276 330 aa11.78□□□□□ -0.52
LINC00648-204ENST00000557749 SLC6A4P31645 630 aa11.78□□□□□ -0.52
LINC00648-204ENST00000557749 COPB1P53618 953 aaKnown RBP11.78□□□□□ -0.52
LINC00648-204ENST00000557749 POLR2FP61218 127 aaKnown RBP11.78□□□□□ -0.52
LINC00648-204ENST00000557749 CDR2Q01850 454 aa11.78□□□□□ -0.52
LINC00648-204ENST00000557749 UBXN1Q04323 297 aa11.78□□□□□ -0.52
LINC00648-204ENST00000557749 ZNF33AQ06730 810 aa11.78□□□□□ -0.52
LINC00648-204ENST00000557749 SF3A2Q15428 464 aaKnown RBP11.78□□□□□ -0.52
LINC00648-204ENST00000557749 SLC25A52Q3SY17 297 aa11.78□□□□□ -0.52
LINC00648-204ENST00000557749 FAM102AQ5T9C2 384 aaPredicted RBP11.78□□□□□ -0.52
LINC00648-204ENST00000557749 STPG1Q5TH74 334 aa11.78□□□□□ -0.52
LINC00648-204ENST00000557749 ZNF776Q68DI1 518 aaPredicted RBP11.78□□□□□ -0.52
LINC00648-204ENST00000557749 KIAA1211LQ6NV74 962 aa11.78□□□□□ -0.52
LINC00648-204ENST00000557749 SLC23A3Q6PIS1 610 aa11.78□□□□□ -0.52
LINC00648-204ENST00000557749 LRRC31Q6UY01 552 aa11.78□□□□□ -0.52
LINC00648-204ENST00000557749 ADIPOR2Q86V24 386 aa11.78□□□□□ -0.52
LINC00648-204ENST00000557749 TMEFF1Q8IYR6 380 aa11.78□□□□□ -0.52
LINC00648-204ENST00000557749 LGI2Q8N0V4 545 aa11.78□□□□□ -0.52
LINC00648-204ENST00000557749 DEPDC4Q8N2C3 294 aa11.78□□□□□ -0.52
LINC00648-204ENST00000557749 RLN3Q8WXF3 142 aa11.78□□□□□ -0.52
LINC00648-204ENST00000557749 PRICKLE1Q96MT3 831 aaPredicted RBP11.78□□□□□ -0.52
LINC00648-204ENST00000557749 ZDHHC5Q9C0B5 715 aa11.78□□□□□ -0.52
LINC00648-204ENST00000557749 NUCKS1Q9H1E3 243 aaKnown RBP11.78□□□□□ -0.52
LINC00648-204ENST00000557749 RETREG1Q9H6L5 497 aa11.78□□□□□ -0.52
LINC00648-204ENST00000557749 WDCPQ9H6R7 721 aa11.78□□□□□ -0.52
LINC00648-204ENST00000557749 FAM207AQ9NSI2 230 aaPredicted RBP11.78□□□□□ -0.52
LINC00648-204ENST00000557749 PILRBQ9UKJ0 227 aa11.78□□□□□ -0.52
LINC00648-204ENST00000557749 SLC6A14Q9UN76 642 aa11.78□□□□□ -0.52
LINC00648-204ENST00000557749 INVSQ9Y283 1065 aa11.78□□□□□ -0.52
LINC00648-204ENST00000557749 NCKAP1Q9Y2A7 1128 aa11.78□□□□□ -0.52
LINC00648-204ENST00000557749 RAD54BQ9Y620 910 aa11.78□□□□□ -0.52
LINC00648-204ENST00000557749 CACNA1AO00555 2505 aa11.78□□□□□ -0.52
LINC00648-204ENST00000557749 NUP205Q92621 2012 aa11.77□□□□□ -0.52
LINC00648-204ENST00000557749 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.77□□□□□ -0.53
LINC00648-204ENST00000557749 TARSL2A2RTX5 802 aaKnown RBP11.77□□□□□ -0.53
LINC00648-204ENST00000557749 ANKRD62A6NC57 917 aa11.77□□□□□ -0.53
LINC00648-204ENST00000557749 MEI4A8MW99 385 aa11.77□□□□□ -0.53
LINC00648-204ENST00000557749 ATP9BO43861 1147 aa11.77□□□□□ -0.53
LINC00648-204ENST00000557749 SERPINF2P08697 491 aa11.77□□□□□ -0.53
LINC00648-204ENST00000557749 NSFP46459 744 aaKnown RBP11.77□□□□□ -0.53
LINC00648-204ENST00000557749 RPS24P62847 133 aaKnown RBP11.77□□□□□ -0.53
LINC00648-204ENST00000557749 APBA1Q02410 837 aa11.77□□□□□ -0.53
LINC00648-204ENST00000557749 GFPT1Q06210 699 aaPredicted RBP11.77□□□□□ -0.53
LINC00648-204ENST00000557749 TYRO3Q06418 890 aa11.77□□□□□ -0.53
LINC00648-204ENST00000557749 NME3Q13232 169 aa11.77□□□□□ -0.53
LINC00648-204ENST00000557749 ZNF177Q13360 481 aaPredicted RBP11.77□□□□□ -0.53
LINC00648-204ENST00000557749 EIF4EBP2Q13542 120 aaPredicted RBP11.77□□□□□ -0.53
LINC00648-204ENST00000557749 ARL13BQ3SXY8 428 aa11.77□□□□□ -0.53
LINC00648-204ENST00000557749 TRIM61Q5EBN2 209 aa11.77□□□□□ -0.53
LINC00648-204ENST00000557749 RAP1GAP2Q684P5 730 aa11.77□□□□□ -0.53
LINC00648-204ENST00000557749 NADSYN1Q6IA69 706 aa11.77□□□□□ -0.53
LINC00648-204ENST00000557749 DSG4Q86SJ6 1040 aa11.77□□□□□ -0.53
LINC00648-204ENST00000557749 RGL4Q8IZJ4 473 aa11.77□□□□□ -0.53
LINC00648-204ENST00000557749 ZNF419Q96HQ0 510 aaPredicted RBP11.77□□□□□ -0.53
LINC00648-204ENST00000557749 RPRD1AQ96P16 312 aaPredicted RBP11.77□□□□□ -0.53
LINC00648-204ENST00000557749 ERGIC2Q96RQ1 377 aa11.77□□□□□ -0.53
LINC00648-204ENST00000557749 GANQ9H2C0 597 aa11.77□□□□□ -0.53
LINC00648-204ENST00000557749 MBD1Q9UIS9 605 aaPredicted RBP11.77□□□□□ -0.53
LINC00648-204ENST00000557749 CLEC4EQ9ULY5 219 aa11.77□□□□□ -0.53
LINC00648-204ENST00000557749 MYO6Q9UM54 1294 aa11.77□□□□□ -0.53
LINC00648-204ENST00000557749 CKAP5Q14008 2032 aa11.77□□□□□ -0.53
LINC00648-204ENST00000557749 ABCA7Q8IZY2 2146 aa11.77□□□□□ -0.53
LINC00648-204ENST00000557749 SYNJ2BP-COX16A0A087WUM0 186 aa11.76□□□□□ -0.53
LINC00648-204ENST00000557749 EDDM13A0A1B0GTR0 161 aa11.76□□□□□ -0.53
LINC00648-204ENST00000557749 GOLGA6L7A0A1B0GV03 622 aa11.76□□□□□ -0.53
LINC00648-204ENST00000557749 LNP1A1A4G5 178 aa11.76□□□□□ -0.53
LINC00648-204ENST00000557749 GFPT2O94808 682 aa11.76□□□□□ -0.53
LINC00648-204ENST00000557749 CALB1P05937 261 aa11.76□□□□□ -0.53
LINC00648-204ENST00000557749 SNRPBP14678 240 aaKnown RBP11.76□□□□□ -0.53
LINC00648-204ENST00000557749 ZNF18P17022 549 aa11.76□□□□□ -0.53
LINC00648-204ENST00000557749 PRKCHP24723 683 aa11.76□□□□□ -0.53
LINC00648-204ENST00000557749 CD70P32970 193 aa11.76□□□□□ -0.53
LINC00648-204ENST00000557749 RDXP35241 583 aaKnown RBP11.76□□□□□ -0.53
LINC00648-204ENST00000557749 CSKP41240 450 aa11.76□□□□□ -0.53
LINC00648-204ENST00000557749 SULT1E1P49888 294 aa11.76□□□□□ -0.53
LINC00648-204ENST00000557749 TPMTP51580 245 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms