RNA–Protein interactions for RNA: ENST00000557726.1

RDH11-211, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 621 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-211ENST00000557726 MEA1Q16626 185 aa13.19□□□□□ -0.3
RDH11-211ENST00000557726 ARHGAP44Q17R89 818 aa13.19□□□□□ -0.3
RDH11-211ENST00000557726 SLC45A4Q5BKX6 768 aa13.19□□□□□ -0.3
RDH11-211ENST00000557726 RABGAP1LQ5R372 815 aa13.19□□□□□ -0.3
RDH11-211ENST00000557726 TBC1D3GQ6DHY5 549 aa13.19□□□□□ -0.3
RDH11-211ENST00000557726 TBC1D3CQ6IPX1 549 aa13.19□□□□□ -0.3
RDH11-211ENST00000557726 TMEM110Q86TL2 294 aa13.19□□□□□ -0.3
RDH11-211ENST00000557726 CIR1Q86X95 450 aaPredicted RBP13.19□□□□□ -0.3
RDH11-211ENST00000557726 MARCH9Q86YJ5 346 aa13.19□□□□□ -0.3
RDH11-211ENST00000557726 TBC1D3Q8IZP1 549 aaPredicted RBP13.19□□□□□ -0.3
RDH11-211ENST00000557726 SERAC1Q96JX3 654 aa13.19□□□□□ -0.3
RDH11-211ENST00000557726 FAM129BQ96TA1 746 aa13.19□□□□□ -0.3
RDH11-211ENST00000557726 ELF4Q99607 663 aaPredicted RBP13.19□□□□□ -0.3
RDH11-211ENST00000557726 ORAI3Q9BRQ5 295 aa13.19□□□□□ -0.3
RDH11-211ENST00000557726 CRACR2AQ9BSW2 395 aa13.19□□□□□ -0.3
RDH11-211ENST00000557726 ACP6Q9NPH0 428 aa13.19□□□□□ -0.3
RDH11-211ENST00000557726 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.19□□□□□ -0.3
RDH11-211ENST00000557726 ADAMTS1Q9UHI8 967 aa13.19□□□□□ -0.3
RDH11-211ENST00000557726 CYTH4Q9UIA0 394 aa13.19□□□□□ -0.3
RDH11-211ENST00000557726 ZFYVE26Q68DK2 2539 aa13.19□□□□□ -0.3
RDH11-211ENST00000557726 URB1O60287 2271 aaKnown RBP13.19□□□□□ -0.3
RDH11-211ENST00000557726 DOCK9Q9BZ29 2069 aa13.18□□□□□ -0.3
RDH11-211ENST00000557726 A0A1B0GTQ1 180 aa13.18□□□□□ -0.3
RDH11-211ENST00000557726 FAM149AA5PLN7 773 aa13.18□□□□□ -0.3
RDH11-211ENST00000557726 MZF1P28698 734 aaPredicted RBP13.18□□□□□ -0.3
RDH11-211ENST00000557726 CCR5P51681 352 aa13.18□□□□□ -0.3
RDH11-211ENST00000557726 OXCT1P55809 520 aa13.18□□□□□ -0.3
RDH11-211ENST00000557726 PITX1P78337 314 aaPredicted RBP13.18□□□□□ -0.3
RDH11-211ENST00000557726 PDCLQ13371 301 aa13.18□□□□□ -0.3
RDH11-211ENST00000557726 COL9A2Q14055 689 aaPredicted RBP13.18□□□□□ -0.3
RDH11-211ENST00000557726 ELAVL3Q14576 367 aaKnown RBP13.18□□□□□ -0.3
RDH11-211ENST00000557726 TAF5Q15542 800 aa13.18□□□□□ -0.3
RDH11-211ENST00000557726 TTC39BQ5VTQ0 682 aaPredicted RBP13.18□□□□□ -0.3
RDH11-211ENST00000557726 GJB7Q6PEY0 223 aa13.18□□□□□ -0.3
RDH11-211ENST00000557726 DHRS13Q6UX07 377 aa13.18□□□□□ -0.3
RDH11-211ENST00000557726 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.18□□□□□ -0.3
RDH11-211ENST00000557726 GATAD2AQ86YP4 633 aa13.18□□□□□ -0.3
RDH11-211ENST00000557726 CCAR2Q8N163 923 aaKnown RBP13.18□□□□□ -0.3
RDH11-211ENST00000557726 AADATQ8N5Z0 425 aa13.18□□□□□ -0.3
RDH11-211ENST00000557726 PTPRN2Q92932 1015 aa13.18□□□□□ -0.3
RDH11-211ENST00000557726 FAM81BQ96LP2 452 aa13.18□□□□□ -0.3
RDH11-211ENST00000557726 PPP1R9BQ96SB3 815 aa13.18□□□□□ -0.3
RDH11-211ENST00000557726 EBF2Q9HAK2 575 aa13.18□□□□□ -0.3
RDH11-211ENST00000557726 GDF3Q9NR23 364 aa13.18□□□□□ -0.3
RDH11-211ENST00000557726 DDIT4Q9NX09 232 aa13.18□□□□□ -0.3
RDH11-211ENST00000557726 RAXQ9Y2V3 346 aa13.18□□□□□ -0.3
RDH11-211ENST00000557726 GPSM3Q9Y4H4 160 aa13.18□□□□□ -0.3
RDH11-211ENST00000557726 ANKRD11Q6UB99 2663 aaPredicted RBP13.18□□□□□ -0.3
RDH11-211ENST00000557726 ZFHX4Q86UP3 3567 aa13.17□□□□□ -0.3
RDH11-211ENST00000557726 APC2O95996 2303 aa13.17□□□□□ -0.3
RDH11-211ENST00000557726 A0A1B0GVM2 712 aa13.17□□□□□ -0.3
RDH11-211ENST00000557726 TRABD2BA6NFA1 517 aa13.17□□□□□ -0.3
RDH11-211ENST00000557726 TCAF2A6NFQ2 919 aa13.17□□□□□ -0.3
RDH11-211ENST00000557726 GRAP2O75791 330 aa13.17□□□□□ -0.3
RDH11-211ENST00000557726 DKK1O94907 266 aa13.17□□□□□ -0.3
RDH11-211ENST00000557726 LDOC1O95751 146 aaPredicted RBP13.17□□□□□ -0.3
RDH11-211ENST00000557726 WNT1P04628 370 aa13.17□□□□□ -0.3
RDH11-211ENST00000557726 CCR1P32246 355 aa13.17□□□□□ -0.3
RDH11-211ENST00000557726 ADPRHP54922 357 aa13.17□□□□□ -0.3
RDH11-211ENST00000557726 CYP4F3Q08477 520 aa13.17□□□□□ -0.3
RDH11-211ENST00000557726 KCNJ12Q14500 433 aa13.17□□□□□ -0.3
RDH11-211ENST00000557726 ACCSLQ4AC99 568 aa13.17□□□□□ -0.3
RDH11-211ENST00000557726 EFHC1Q5JVL4 640 aa13.17□□□□□ -0.3
RDH11-211ENST00000557726 OR6B2Q6IFH4 312 aa13.17□□□□□ -0.3
RDH11-211ENST00000557726 TRIM65Q6PJ69 517 aa13.17□□□□□ -0.3
RDH11-211ENST00000557726 GBP6Q6ZN66 633 aa13.17□□□□□ -0.3
RDH11-211ENST00000557726 DSG4Q86SJ6 1040 aa13.17□□□□□ -0.3
RDH11-211ENST00000557726 PASD1Q8IV76 773 aa13.17□□□□□ -0.3
RDH11-211ENST00000557726 DEFB106AQ8N104 65 aa13.17□□□□□ -0.3
RDH11-211ENST00000557726 HNRNPLLQ8WVV9 542 aaKnown RBP13.17□□□□□ -0.3
RDH11-211ENST00000557726 OR8D1Q8WZ84 308 aa13.17□□□□□ -0.3
RDH11-211ENST00000557726 CNDP2Q96KP4 475 aaKnown RBP13.17□□□□□ -0.3
RDH11-211ENST00000557726 RPRD1AQ96P16 312 aaPredicted RBP13.17□□□□□ -0.3
RDH11-211ENST00000557726 NOX5Q96PH1 765 aa13.17□□□□□ -0.3
RDH11-211ENST00000557726 SLC25A13Q9UJS0 675 aa13.17□□□□□ -0.3
RDH11-211ENST00000557726 TPX2Q9ULW0 747 aaKnown RBP13.17□□□□□ -0.3
RDH11-211ENST00000557726 ATRXP46100 2492 aa13.16□□□□□ -0.3
RDH11-211ENST00000557726 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.16□□□□□ -0.3
RDH11-211ENST00000557726 PLK4O00444 970 aa13.16□□□□□ -0.3
RDH11-211ENST00000557726 ENC1O14682 589 aa13.16□□□□□ -0.3
RDH11-211ENST00000557726 YKT6O15498 198 aa13.16□□□□□ -0.3
RDH11-211ENST00000557726 BNIP3LO60238 219 aa13.16□□□□□ -0.3
RDH11-211ENST00000557726 HSF2BPO75031 334 aa13.16□□□□□ -0.3
RDH11-211ENST00000557726 GADD45BO75293 160 aaPredicted RBP13.16□□□□□ -0.3
RDH11-211ENST00000557726 IGLV3-25P01717 112 aa13.16□□□□□ -0.3
RDH11-211ENST00000557726 GLI1P08151 1106 aa13.16□□□□□ -0.3
RDH11-211ENST00000557726 VAV1P15498 845 aa13.16□□□□□ -0.3
RDH11-211ENST00000557726 ZNF18P17022 549 aa13.16□□□□□ -0.3
RDH11-211ENST00000557726 SLC9A1P19634 815 aa13.16□□□□□ -0.3
RDH11-211ENST00000557726 ARRB1P49407 418 aaPredicted RBP13.16□□□□□ -0.3
RDH11-211ENST00000557726 SNX16P57768 344 aa13.16□□□□□ -0.3
RDH11-211ENST00000557726 NME3Q13232 169 aa13.16□□□□□ -0.3
RDH11-211ENST00000557726 ZNF177Q13360 481 aaPredicted RBP13.16□□□□□ -0.3
RDH11-211ENST00000557726 COL28A1Q2UY09 1125 aa13.16□□□□□ -0.3
RDH11-211ENST00000557726 FAM46CQ5VWP2 391 aa13.16□□□□□ -0.3
RDH11-211ENST00000557726 FBXL22Q6P050 247 aa13.16□□□□□ -0.3
RDH11-211ENST00000557726 PRPF39Q86UA1 669 aaKnown RBP13.16□□□□□ -0.3
RDH11-211ENST00000557726 PDCD7Q8N8D1 485 aaKnown RBP13.16□□□□□ -0.3
RDH11-211ENST00000557726 PPP1R13BQ96KQ4 1090 aa13.16□□□□□ -0.3
RDH11-211ENST00000557726 SLC2A13Q96QE2 648 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms