RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 MGAMO43451 1857 aa16.66■□□□□ 0.26
SHMT2-232ENST00000557487 RNF103O00237 685 aa16.65■□□□□ 0.26
SHMT2-232ENST00000557487 TIMM44O43615 452 aa16.65■□□□□ 0.26
SHMT2-232ENST00000557487 ZBTB14O43829 449 aa16.65■□□□□ 0.26
SHMT2-232ENST00000557487 TMCC1O94876 653 aa16.65■□□□□ 0.26
SHMT2-232ENST00000557487 ADGRE1Q14246 886 aa16.65■□□□□ 0.26
SHMT2-232ENST00000557487 AMHR2Q16671 573 aa16.65■□□□□ 0.26
SHMT2-232ENST00000557487 ZNF484Q5JVG2 852 aa16.65■□□□□ 0.26
SHMT2-232ENST00000557487 PRAMEF18Q5VWM3 479 aa16.65■□□□□ 0.26
SHMT2-232ENST00000557487 FBXL19Q6PCT2 694 aa16.65■□□□□ 0.26
SHMT2-232ENST00000557487 CLEC14AQ86T13 490 aa16.65■□□□□ 0.26
SHMT2-232ENST00000557487 CDR2LQ86X02 465 aaPredicted RBP16.65■□□□□ 0.26
SHMT2-232ENST00000557487 SCUBE3Q8IX30 993 aa16.65■□□□□ 0.26
SHMT2-232ENST00000557487 UNC5BQ8IZJ1 945 aa16.65■□□□□ 0.26
SHMT2-232ENST00000557487 DCLK2Q8N568 766 aa16.65■□□□□ 0.26
SHMT2-232ENST00000557487 TDRD5Q8NAT2 981 aaKnown RBP16.65■□□□□ 0.26
SHMT2-232ENST00000557487 SHKBP1Q8TBC3 707 aa16.65■□□□□ 0.26
SHMT2-232ENST00000557487 IRGQQ8WZA9 623 aa16.65■□□□□ 0.26
SHMT2-232ENST00000557487 MINDY3Q9H8M7 445 aa16.65■□□□□ 0.26
SHMT2-232ENST00000557487 HACD3Q9P035 362 aa16.65■□□□□ 0.26
SHMT2-232ENST00000557487 ANKRD6Q9Y2G4 727 aa16.65■□□□□ 0.26
SHMT2-232ENST00000557487 RAP2CQ9Y3L5 183 aa16.65■□□□□ 0.26
SHMT2-232ENST00000557487 PSAT1Q9Y617 370 aa16.65■□□□□ 0.26
SHMT2-232ENST00000557487 RAD54BQ9Y620 910 aa16.65■□□□□ 0.26
SHMT2-232ENST00000557487 ARHGAP10A1A4S6 786 aa16.64■□□□□ 0.26
SHMT2-232ENST00000557487 MAGEB16A2A368 324 aa16.64■□□□□ 0.26
SHMT2-232ENST00000557487 ERI2A8K979 691 aaKnown RBP16.64■□□□□ 0.26
SHMT2-232ENST00000557487 H0YJX3 145 aa16.64■□□□□ 0.26
SHMT2-232ENST00000557487 HDAC3O15379 428 aa16.64■□□□□ 0.26
SHMT2-232ENST00000557487 DNAJA2O60884 412 aa16.64■□□□□ 0.26
SHMT2-232ENST00000557487 ASLP04424 464 aa16.64■□□□□ 0.26
SHMT2-232ENST00000557487 PIK3R1P27986 724 aa16.64■□□□□ 0.26
SHMT2-232ENST00000557487 IFRD2Q12894 506 aaPredicted RBP16.64■□□□□ 0.26
SHMT2-232ENST00000557487 TLR1Q15399 786 aa16.64■□□□□ 0.26
SHMT2-232ENST00000557487 LY6KQ17RY6 165 aa16.64■□□□□ 0.26
SHMT2-232ENST00000557487 VWA5B1Q5TIE3 1220 aa16.64■□□□□ 0.26
SHMT2-232ENST00000557487 SATL1Q86VE3 508 aa16.64■□□□□ 0.26
SHMT2-232ENST00000557487 TRIM50Q86XT4 487 aa16.64■□□□□ 0.26
SHMT2-232ENST00000557487 PGAM4Q8N0Y7 254 aa16.64■□□□□ 0.26
SHMT2-232ENST00000557487 ZNF781Q8N8C0 355 aa16.64■□□□□ 0.26
SHMT2-232ENST00000557487 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.64■□□□□ 0.26
SHMT2-232ENST00000557487 KLRG1Q96E93 195 aa16.64■□□□□ 0.26
SHMT2-232ENST00000557487 LENG8Q96PV6 779 aaPredicted RBP16.64■□□□□ 0.26
SHMT2-232ENST00000557487 MRPL40Q9NQ50 206 aaKnown RBP16.64■□□□□ 0.26
SHMT2-232ENST00000557487 SYBUQ9NX95 663 aa16.64■□□□□ 0.26
SHMT2-232ENST00000557487 CIDEBQ9UHD4 219 aa16.64■□□□□ 0.26
SHMT2-232ENST00000557487 ABT1Q9ULW3 272 aaKnown RBP16.64■□□□□ 0.26
SHMT2-232ENST00000557487 RPS6KL1Q9Y6S9 549 aa16.64■□□□□ 0.26
SHMT2-232ENST00000557487 CAPN8A6NHC0 703 aa16.64■□□□□ 0.25
SHMT2-232ENST00000557487 G3V2L1 256 aa16.64■□□□□ 0.25
SHMT2-232ENST00000557487 MATN2O00339 956 aa16.64■□□□□ 0.25
SHMT2-232ENST00000557487 TADA2AO75478 443 aa16.64■□□□□ 0.25
SHMT2-232ENST00000557487 BST2Q10589 180 aaKnown RBP16.64■□□□□ 0.25
SHMT2-232ENST00000557487 DEFB115Q30KQ5 88 aa16.64■□□□□ 0.25
SHMT2-232ENST00000557487 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.64■□□□□ 0.25
SHMT2-232ENST00000557487 PPM1JQ5JR12 505 aa16.64■□□□□ 0.25
SHMT2-232ENST00000557487 ARMC3Q5W041 872 aa16.64■□□□□ 0.25
SHMT2-232ENST00000557487 ATG14Q6ZNE5 492 aa16.64■□□□□ 0.25
SHMT2-232ENST00000557487 TICAM1Q8IUC6 712 aa16.64■□□□□ 0.25
SHMT2-232ENST00000557487 C12orf29Q8N999 325 aa16.64■□□□□ 0.25
SHMT2-232ENST00000557487 HIPK4Q8NE63 616 aa16.64■□□□□ 0.25
SHMT2-232ENST00000557487 P2RY11Q96G91 374 aa16.64■□□□□ 0.25
SHMT2-232ENST00000557487 MAML3Q96JK9 1138 aa16.64■□□□□ 0.25
SHMT2-232ENST00000557487 GCNAQ96QF7 691 aa16.64■□□□□ 0.25
SHMT2-232ENST00000557487 NSMCE4AQ9NXX6 385 aa16.64■□□□□ 0.25
SHMT2-232ENST00000557487 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.64■□□□□ 0.25
SHMT2-232ENST00000557487 DMTF1Q9Y222 760 aa16.64■□□□□ 0.25
SHMT2-232ENST00000557487 A0A0G2JMZ2 1700 aa16.64■□□□□ 0.25
SHMT2-232ENST00000557487 LRRC37A2A6NM11 1700 aa16.64■□□□□ 0.25
SHMT2-232ENST00000557487 E9PBE3 544 aa16.63■□□□□ 0.25
SHMT2-232ENST00000557487 AP3B1O00203 1094 aa16.63■□□□□ 0.25
SHMT2-232ENST00000557487 KLHL41O60662 606 aa16.63■□□□□ 0.25
SHMT2-232ENST00000557487 IQCF3P0C7M6 154 aa16.63■□□□□ 0.25
SHMT2-232ENST00000557487 CYP2C9P11712 490 aa16.63■□□□□ 0.25
SHMT2-232ENST00000557487 PMLP29590 882 aa16.63■□□□□ 0.25
SHMT2-232ENST00000557487 NUDT2P50583 147 aa16.63■□□□□ 0.25
SHMT2-232ENST00000557487 CLCN3P51790 818 aa16.63■□□□□ 0.25
SHMT2-232ENST00000557487 BCAT1P54687 386 aa16.63■□□□□ 0.25
SHMT2-232ENST00000557487 PRKAA1Q13131 559 aa16.63■□□□□ 0.25
SHMT2-232ENST00000557487 CYLC2Q14093 348 aaPredicted RBP16.63■□□□□ 0.25
SHMT2-232ENST00000557487 FLOT2Q14254 428 aa16.63■□□□□ 0.25
SHMT2-232ENST00000557487 HSDL1Q3SXM5 330 aa16.63■□□□□ 0.25
SHMT2-232ENST00000557487 SLC9B1Q4ZJI4 515 aa16.63■□□□□ 0.25
SHMT2-232ENST00000557487 PIGGQ5H8A4 983 aa16.63■□□□□ 0.25
SHMT2-232ENST00000557487 PDZD4Q76G19 769 aaPredicted RBP16.63■□□□□ 0.25
SHMT2-232ENST00000557487 TMEM135Q86UB9 458 aa16.63■□□□□ 0.25
SHMT2-232ENST00000557487 DSELQ8IZU8 1212 aa16.63■□□□□ 0.25
SHMT2-232ENST00000557487 PGBD4Q96DM1 585 aa16.63■□□□□ 0.25
SHMT2-232ENST00000557487 HSFY1Q96LI6 401 aa16.63■□□□□ 0.25
SHMT2-232ENST00000557487 DRC3Q9H069 523 aa16.63■□□□□ 0.25
SHMT2-232ENST00000557487 RNPEPQ9H4A4 650 aa16.63■□□□□ 0.25
SHMT2-232ENST00000557487 PLEKHA5Q9HAU0 1116 aa16.63■□□□□ 0.25
SHMT2-232ENST00000557487 NMRAL1Q9HBL8 299 aa16.63■□□□□ 0.25
SHMT2-232ENST00000557487 BFARQ9NZS9 450 aa16.63■□□□□ 0.25
SHMT2-232ENST00000557487 SLC17A6Q9P2U8 582 aa16.63■□□□□ 0.25
SHMT2-232ENST00000557487 FZD10Q9ULW2 581 aa16.63■□□□□ 0.25
SHMT2-232ENST00000557487 ZSWIM8A7E2V4 1837 aa16.63■□□□□ 0.25
SHMT2-232ENST00000557487 A0A096LPK6 155 aa16.62■□□□□ 0.25
SHMT2-232ENST00000557487 SORBS2O94875 1100 aaKnown RBP16.62■□□□□ 0.25
SHMT2-232ENST00000557487 C22orf31O95567 290 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms