RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 SCYL2Q6P3W7 929 aa14.21□□□□□ -0.13
VPS33B-206ENST00000557358 PRR23CQ6ZRP0 262 aa14.21□□□□□ -0.13
VPS33B-206ENST00000557358 DSG4Q86SJ6 1040 aa14.21□□□□□ -0.13
VPS33B-206ENST00000557358 CIR1Q86X95 450 aaPredicted RBP14.21□□□□□ -0.13
VPS33B-206ENST00000557358 TMEFF1Q8IYR6 380 aa14.21□□□□□ -0.13
VPS33B-206ENST00000557358 GANCQ8TET4 914 aa14.21□□□□□ -0.13
VPS33B-206ENST00000557358 PIGKQ92643 395 aa14.21□□□□□ -0.13
VPS33B-206ENST00000557358 IGSF8Q969P0 613 aa14.21□□□□□ -0.13
VPS33B-206ENST00000557358 CCDC114Q96M63 670 aa14.21□□□□□ -0.13
VPS33B-206ENST00000557358 MCEEQ96PE7 176 aa14.21□□□□□ -0.13
VPS33B-206ENST00000557358 CNPY3Q9BT09 278 aa14.21□□□□□ -0.13
VPS33B-206ENST00000557358 ZYG11BQ9C0D3 744 aa14.21□□□□□ -0.13
VPS33B-206ENST00000557358 DONSONQ9NYP3 566 aa14.21□□□□□ -0.13
VPS33B-206ENST00000557358 CAPN11Q9UMQ6 739 aa14.21□□□□□ -0.13
VPS33B-206ENST00000557358 NUP205Q92621 2012 aa14.2□□□□□ -0.14
VPS33B-206ENST00000557358 ITIH6Q6UXX5 1313 aa14.2□□□□□ -0.14
VPS33B-206ENST00000557358 BCLAF3A2AJT9 711 aaKnown RBP14.2□□□□□ -0.14
VPS33B-206ENST00000557358 RNF8O76064 485 aa14.2□□□□□ -0.14
VPS33B-206ENST00000557358 FTLP02792 175 aaPredicted RBP14.2□□□□□ -0.14
VPS33B-206ENST00000557358 SERPING1P05155 500 aa14.2□□□□□ -0.14
VPS33B-206ENST00000557358 GNSP15586 552 aa14.2□□□□□ -0.14
VPS33B-206ENST00000557358 BCKDHBP21953 392 aa14.2□□□□□ -0.14
VPS33B-206ENST00000557358 ADRA1BP35368 520 aa14.2□□□□□ -0.14
VPS33B-206ENST00000557358 HOXD12P35452 270 aa14.2□□□□□ -0.14
VPS33B-206ENST00000557358 GGCXP38435 758 aa14.2□□□□□ -0.14
VPS33B-206ENST00000557358 ID4P47928 161 aa14.2□□□□□ -0.14
VPS33B-206ENST00000557358 PTP4A2Q12974 167 aa14.2□□□□□ -0.14
VPS33B-206ENST00000557358 PTPRNQ16849 979 aa14.2□□□□□ -0.14
VPS33B-206ENST00000557358 HNRNPA1L2Q32P51 320 aaKnown RBP14.2□□□□□ -0.14
VPS33B-206ENST00000557358 ACCSLQ4AC99 568 aa14.2□□□□□ -0.14
VPS33B-206ENST00000557358 WDR45BQ5MNZ6 344 aa14.2□□□□□ -0.14
VPS33B-206ENST00000557358 OTUD1Q5VV17 481 aaPredicted RBP14.2□□□□□ -0.14
VPS33B-206ENST00000557358 RWDD4Q6NW29 188 aaKnown RBP14.2□□□□□ -0.14
VPS33B-206ENST00000557358 WDR59Q6PJI9 974 aa14.2□□□□□ -0.14
VPS33B-206ENST00000557358 ZNF783Q6ZMS7 281 aa14.2□□□□□ -0.14
VPS33B-206ENST00000557358 SLFN11Q7Z7L1 901 aa14.2□□□□□ -0.14
VPS33B-206ENST00000557358 JOSD2Q8TAC2 188 aa14.2□□□□□ -0.14
VPS33B-206ENST00000557358 CEP76Q8TAP6 659 aa14.2□□□□□ -0.14
VPS33B-206ENST00000557358 NETO1Q8TDF5 533 aa14.2□□□□□ -0.14
VPS33B-206ENST00000557358 MYEOVQ96EZ4 313 aa14.2□□□□□ -0.14
VPS33B-206ENST00000557358 LMLNQ96KR4 655 aa14.2□□□□□ -0.14
VPS33B-206ENST00000557358 FEM1AQ9BSK4 669 aa14.2□□□□□ -0.14
VPS33B-206ENST00000557358 NUSAP1Q9BXS6 441 aaKnown RBP14.2□□□□□ -0.14
VPS33B-206ENST00000557358 XPO4Q9C0E2 1151 aaKnown RBP14.2□□□□□ -0.14
VPS33B-206ENST00000557358 TTYH3Q9C0H2 523 aa14.2□□□□□ -0.14
VPS33B-206ENST00000557358 MKRN2Q9H000 416 aaKnown RBP14.2□□□□□ -0.14
VPS33B-206ENST00000557358 OSBPL2Q9H1P3 480 aa14.2□□□□□ -0.14
VPS33B-206ENST00000557358 GRPEL1Q9HAV7 217 aa14.2□□□□□ -0.14
VPS33B-206ENST00000557358 ITM2CQ9NQX7 267 aa14.2□□□□□ -0.14
VPS33B-206ENST00000557358 PPARGC1AQ9UBK2 798 aaKnown RBP14.2□□□□□ -0.14
VPS33B-206ENST00000557358 OR12D3Q9UGF7 316 aa14.2□□□□□ -0.14
VPS33B-206ENST00000557358 SUSD2Q9UGT4 822 aa14.2□□□□□ -0.14
VPS33B-206ENST00000557358 TBC1D30Q9Y2I9 924 aa14.2□□□□□ -0.14
VPS33B-206ENST00000557358 IGHV1OR15-9A0A0B4J2B8 117 aa14.19□□□□□ -0.14
VPS33B-206ENST00000557358 DRGXA6NNA5 263 aa14.19□□□□□ -0.14
VPS33B-206ENST00000557358 MEI4A8MW99 385 aa14.19□□□□□ -0.14
VPS33B-206ENST00000557358 RRM1P23921 792 aa14.19□□□□□ -0.14
VPS33B-206ENST00000557358 PSMA2P25787 234 aa14.19□□□□□ -0.14
VPS33B-206ENST00000557358 TPMTP51580 245 aa14.19□□□□□ -0.14
VPS33B-206ENST00000557358 ATXN1P54253 815 aaKnown RBP14.19□□□□□ -0.14
VPS33B-206ENST00000557358 ZNF33AQ06730 810 aa14.19□□□□□ -0.14
VPS33B-206ENST00000557358 PUM1Q14671 1186 aaKnown RBP eCLIP14.19□□□□□ -0.14
VPS33B-206ENST00000557358 ARID5BQ14865 1188 aa14.19□□□□□ -0.14
VPS33B-206ENST00000557358 SPECC1LQ69YQ0 1117 aa14.19□□□□□ -0.14
VPS33B-206ENST00000557358 CXorf57Q6NSI4 855 aaKnown RBP14.19□□□□□ -0.14
VPS33B-206ENST00000557358 RETSATQ6NUM9 610 aa14.19□□□□□ -0.14
VPS33B-206ENST00000557358 ARMCX6Q7L4S7 300 aa14.19□□□□□ -0.14
VPS33B-206ENST00000557358 ZNF571Q7Z3V5 609 aaPredicted RBP14.19□□□□□ -0.14
VPS33B-206ENST00000557358 BNIPLQ7Z465 357 aa14.19□□□□□ -0.14
VPS33B-206ENST00000557358 TFAP2DQ7Z6R9 452 aa14.19□□□□□ -0.14
VPS33B-206ENST00000557358 C14orf80Q86SX3 495 aa14.19□□□□□ -0.14
VPS33B-206ENST00000557358 CACUL1Q86Y37 369 aa14.19□□□□□ -0.14
VPS33B-206ENST00000557358 SYT12Q8IV01 421 aa14.19□□□□□ -0.14
VPS33B-206ENST00000557358 RGL4Q8IZJ4 473 aa14.19□□□□□ -0.14
VPS33B-206ENST00000557358 APCDD1Q8J025 514 aa14.19□□□□□ -0.14
VPS33B-206ENST00000557358 ZNF366Q8N895 744 aa14.19□□□□□ -0.14
VPS33B-206ENST00000557358 CENPIQ92674 756 aaPredicted RBP14.19□□□□□ -0.14
VPS33B-206ENST00000557358 NTAN1Q96AB6 310 aa14.19□□□□□ -0.14
VPS33B-206ENST00000557358 ZNF653Q96CK0 615 aa14.19□□□□□ -0.14
VPS33B-206ENST00000557358 TBC1D31Q96DN5 1066 aa14.19□□□□□ -0.14
VPS33B-206ENST00000557358 EPAS1Q99814 870 aa14.19□□□□□ -0.14
VPS33B-206ENST00000557358 DEF6Q9H4E7 631 aa14.19□□□□□ -0.14
VPS33B-206ENST00000557358 PRSS16Q9NQE7 514 aa14.19□□□□□ -0.14
VPS33B-206ENST00000557358 USP36Q9P275 1121 aaKnown RBP14.19□□□□□ -0.14
VPS33B-206ENST00000557358 INTS6Q9UL03 887 aaKnown RBP14.19□□□□□ -0.14
VPS33B-206ENST00000557358 HPCAL4Q9UM19 191 aa14.19□□□□□ -0.14
VPS33B-206ENST00000557358 CEP192Q8TEP8 1941 aa14.19□□□□□ -0.14
VPS33B-206ENST00000557358 IGLV3-10A0A075B6K4 115 aa14.18□□□□□ -0.14
VPS33B-206ENST00000557358 ILVBLA1L0T0 632 aa14.18□□□□□ -0.14
VPS33B-206ENST00000557358 GJB6O95452 261 aa14.18□□□□□ -0.14
VPS33B-206ENST00000557358 PLEKP08567 350 aaPredicted RBP14.18□□□□□ -0.14
VPS33B-206ENST00000557358 SKILP12757 684 aa14.18□□□□□ -0.14
VPS33B-206ENST00000557358 MZF1P28698 734 aaPredicted RBP14.18□□□□□ -0.14
VPS33B-206ENST00000557358 PBX1P40424 430 aa14.18□□□□□ -0.14
VPS33B-206ENST00000557358 RECQLP46063 649 aaPredicted RBP14.18□□□□□ -0.14
VPS33B-206ENST00000557358 COPAP53621 1224 aa14.18□□□□□ -0.14
VPS33B-206ENST00000557358 ATXN3P54252 364 aaPredicted RBP14.18□□□□□ -0.14
VPS33B-206ENST00000557358 GEMIN4P57678 1058 aaKnown RBP14.18□□□□□ -0.14
VPS33B-206ENST00000557358 NRG1Q02297 640 aaPredicted RBP14.18□□□□□ -0.14
VPS33B-206ENST00000557358 CCDC15Q0P6D6 951 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms