RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 NOX5Q96PH1 765 aa5.53□□□□□ -1.52
ATXN3-244ENST00000556898 EMILIN2Q9BXX0 1053 aa5.53□□□□□ -1.52
ATXN3-244ENST00000556898 UBXN6Q9BZV1 441 aa5.53□□□□□ -1.52
ATXN3-244ENST00000556898 DNAI2Q9GZS0 605 aa5.53□□□□□ -1.52
ATXN3-244ENST00000556898 POMKQ9H5K3 350 aa5.53□□□□□ -1.52
ATXN3-244ENST00000556898 MAN1C1Q9NR34 630 aa5.53□□□□□ -1.52
ATXN3-244ENST00000556898 KLHL11Q9NVR0 708 aa5.53□□□□□ -1.52
ATXN3-244ENST00000556898 HCFC1R1Q9NWW0 138 aa5.53□□□□□ -1.52
ATXN3-244ENST00000556898 DLL3Q9NYJ7 618 aa5.53□□□□□ -1.52
ATXN3-244ENST00000556898 COX16Q9P0S2 106 aa5.53□□□□□ -1.52
ATXN3-244ENST00000556898 SFMBT1Q9UHJ3 866 aa5.53□□□□□ -1.52
ATXN3-244ENST00000556898 DNAI1Q9UI46 699 aa5.53□□□□□ -1.52
ATXN3-244ENST00000556898 ANAPC7Q9UJX3 599 aa5.53□□□□□ -1.52
ATXN3-244ENST00000556898 INTUQ9ULD6 942 aa5.53□□□□□ -1.52
ATXN3-244ENST00000556898 SSX2IPQ9Y2D8 614 aa5.53□□□□□ -1.52
ATXN3-244ENST00000556898 HCFC2Q9Y5Z7 792 aa5.53□□□□□ -1.52
ATXN3-244ENST00000556898 IRAK3Q9Y616 596 aa5.53□□□□□ -1.52
ATXN3-244ENST00000556898 AK5Q9Y6K8 562 aa5.53□□□□□ -1.52
ATXN3-244ENST00000556898 PLXNA3P51805 1871 aa5.53□□□□□ -1.52
ATXN3-244ENST00000556898 RIF1Q5UIP0 2472 aaKnown RBP5.53□□□□□ -1.52
ATXN3-244ENST00000556898 CFAP54Q96N23 3096 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 A0A0A6YYK5 440 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-244ENST00000556898 LOC100289279A0A1B0GTE1 492 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 C2CD4BA6NLJ0 364 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 BTNL10A8MVZ5 291 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 MSI1O43347 362 aaKnown RBP5.52□□□□□ -1.53
ATXN3-244ENST00000556898 KRT86O43790 486 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 SRGAP2O75044 1071 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 TADA3O75528 432 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 DAB1O75553 588 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 MTA2O94776 668 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 PROSCO94903 275 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 LTFP02788 710 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 ATP1A1P05023 1023 aaKnown RBP5.52□□□□□ -1.53
ATXN3-244ENST00000556898 MYBL1P10243 752 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 MYL4P12829 197 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 RARGP13631 454 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 GPD1P21695 349 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 COMTP21964 271 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 PSMA2P25787 234 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 YWHAQP27348 245 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 CCR2P41597 374 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 SSR1P43307 286 aaKnown RBP5.52□□□□□ -1.53
ATXN3-244ENST00000556898 ACADSBP45954 432 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 TUFMP49411 452 aaKnown RBP5.52□□□□□ -1.53
ATXN3-244ENST00000556898 SULT1E1P49888 294 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 GSCP56915 257 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-244ENST00000556898 SLC8A3P57103 927 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 YWHAGP61981 247 aaKnown RBP eCLIP5.52□□□□□ -1.53
ATXN3-244ENST00000556898 RPL10AP62906 217 aaKnown RBP5.52□□□□□ -1.53
ATXN3-244ENST00000556898 CYP4F8P98187 520 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 CREMQ03060 361 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 TDGQ13569 410 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 TCEAL1Q15170 157 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 LLGL1Q15334 1064 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 KCTD19Q17RG1 926 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-244ENST00000556898 ATP13A4Q4VNC1 1196 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 PPM1LQ5SGD2 360 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 STXBP5Q5T5C0 1151 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 BSPRYQ5W0U4 402 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 CWF19L1Q69YN2 538 aaKnown RBP5.52□□□□□ -1.53
ATXN3-244ENST00000556898 PM20D1Q6GTS8 502 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 AADACL2Q6P093 401 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 CC2D1AQ6P1N0 951 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-244ENST00000556898 DCUN1D2Q6PH85 259 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 ANKS1BQ7Z6G8 1248 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 DNAJB7Q7Z6W7 309 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-244ENST00000556898 TMEM150AQ86TG1 271 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 TMC8Q8IU68 726 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 RHOT2Q8IXI1 618 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 LRRC57Q8N9N7 239 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 MSANTD4Q8NCY6 345 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 ST13P5Q8NFI4 369 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-244ENST00000556898 RUBCNQ92622 972 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 KRT35Q92764 455 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 FBXO32Q969P5 355 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 WBP2Q969T9 261 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 TCEAL4Q96EI5 215 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 VCPIP1Q96JH7 1222 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 SPATA17Q96L03 361 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 SLC2A13Q96QE2 648 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 PEBP4Q96S96 227 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 TBCBQ99426 244 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 PSMB7Q99436 277 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 CORO1BQ9BR76 489 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 LRRC3Q9BY71 257 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 TSGA10Q9BZW7 698 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 SMOC2Q9H3U7 446 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 CCSER2Q9H7U1 834 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 LUC7LQ9NQ29 371 aaKnown RBP5.52□□□□□ -1.53
ATXN3-244ENST00000556898 ANLNQ9NQW6 1124 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 CNGB3Q9NQW8 809 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 PARVAQ9NVD7 372 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 GPATCH2LQ9NWQ4 482 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.52□□□□□ -1.53
ATXN3-244ENST00000556898 SMARCAL1Q9NZC9 954 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 IL37Q9NZH6 218 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 EHD2Q9NZN4 543 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 WDR35Q9P2L0 1181 aa5.52□□□□□ -1.53
ATXN3-244ENST00000556898 PCSK1NQ9UHG2 260 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms