RNA–Protein interactions for RNA: ENST00000556825.5

SHMT2-226, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 2,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-226ENST00000556825 ADAMTS3O15072 1205 aa14.09□□□□□ -0.15
SHMT2-226ENST00000556825 MT-ND3P03897 115 aa14.09□□□□□ -0.15
SHMT2-226ENST00000556825 MAPK10P53779 464 aa14.09□□□□□ -0.15
SHMT2-226ENST00000556825 TNFAIP2Q03169 654 aa14.09□□□□□ -0.15
SHMT2-226ENST00000556825 PLA2G4EQ3MJ16 856 aa14.09□□□□□ -0.15
SHMT2-226ENST00000556825 DCUN1D2Q6PH85 259 aa14.09□□□□□ -0.15
SHMT2-226ENST00000556825 ZNF677Q86XU0 584 aa14.09□□□□□ -0.15
SHMT2-226ENST00000556825 CHCHD4Q8N4Q1 142 aa14.09□□□□□ -0.15
SHMT2-226ENST00000556825 OR6F1Q8NGZ6 308 aa14.09□□□□□ -0.15
SHMT2-226ENST00000556825 ZFP90Q8TF47 636 aa14.09□□□□□ -0.15
SHMT2-226ENST00000556825 HTRA1Q92743 480 aa14.09□□□□□ -0.15
SHMT2-226ENST00000556825 E2F7Q96AV8 911 aa14.09□□□□□ -0.15
SHMT2-226ENST00000556825 ZFYVE19Q96K21 471 aa14.09□□□□□ -0.15
SHMT2-226ENST00000556825 GLT1D1Q96MS3 346 aa14.09□□□□□ -0.15
SHMT2-226ENST00000556825 TBCBQ99426 244 aa14.09□□□□□ -0.15
SHMT2-226ENST00000556825 MTG1Q9BT17 334 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-226ENST00000556825 CYP26B1Q9NR63 512 aa14.09□□□□□ -0.15
SHMT2-226ENST00000556825 C20orf96Q9NUD7 363 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-226ENST00000556825 MAT2BQ9NZL9 334 aa14.09□□□□□ -0.15
SHMT2-226ENST00000556825 ACTR3BQ9P1U1 418 aa14.09□□□□□ -0.15
SHMT2-226ENST00000556825 GMEB2Q9UKD1 530 aa14.09□□□□□ -0.15
SHMT2-226ENST00000556825 ATP5J2-PTCD1G3V325 749 aa14.09□□□□□ -0.15
SHMT2-226ENST00000556825 RAD51BO15315 384 aa14.09□□□□□ -0.15
SHMT2-226ENST00000556825 PTCD1O75127 700 aaKnown RBP14.09□□□□□ -0.15
SHMT2-226ENST00000556825 LRRN2O75325 713 aa14.09□□□□□ -0.15
SHMT2-226ENST00000556825 IMPDH1P20839 514 aa14.09□□□□□ -0.15
SHMT2-226ENST00000556825 MYF6P23409 242 aa14.09□□□□□ -0.15
SHMT2-226ENST00000556825 L1CAMP32004 1257 aa14.09□□□□□ -0.15
SHMT2-226ENST00000556825 TALDO1P37837 337 aa14.09□□□□□ -0.15
SHMT2-226ENST00000556825 SLC18A2Q05940 514 aa14.09□□□□□ -0.15
SHMT2-226ENST00000556825 TRIM32Q13049 653 aa14.09□□□□□ -0.15
SHMT2-226ENST00000556825 MESDQ14696 234 aa14.09□□□□□ -0.15
SHMT2-226ENST00000556825 ZFP69Q49AA0 526 aa14.09□□□□□ -0.15
SHMT2-226ENST00000556825 FAM47AQ5JRC9 791 aa14.09□□□□□ -0.15
SHMT2-226ENST00000556825 C16orf46Q6P387 395 aa14.09□□□□□ -0.15
SHMT2-226ENST00000556825 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-226ENST00000556825 FRMD7Q6ZUT3 714 aa14.09□□□□□ -0.15
SHMT2-226ENST00000556825 DYMQ7RTS9 669 aa14.09□□□□□ -0.15
SHMT2-226ENST00000556825 NDUFAF2Q8N183 169 aa14.09□□□□□ -0.15
SHMT2-226ENST00000556825 ATG4AQ8WYN0 398 aa14.09□□□□□ -0.15
SHMT2-226ENST00000556825 CCDC120Q96HB5 630 aa14.09□□□□□ -0.15
SHMT2-226ENST00000556825 SLC13A1Q9BZW2 595 aa14.09□□□□□ -0.15
SHMT2-226ENST00000556825 TAS2R7Q9NYW3 318 aa14.09□□□□□ -0.15
SHMT2-226ENST00000556825 MTRRQ9UBK8 725 aa14.09□□□□□ -0.15
SHMT2-226ENST00000556825 MARCOQ9UEW3 520 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-226ENST00000556825 IPO11Q9UI26 975 aaKnown RBP14.09□□□□□ -0.15
SHMT2-226ENST00000556825 ROBO1Q9Y6N7 1651 aa14.08□□□□□ -0.15
SHMT2-226ENST00000556825 KPNA6O60684 536 aa14.08□□□□□ -0.16
SHMT2-226ENST00000556825 SEC14L2O76054 403 aa14.08□□□□□ -0.16
SHMT2-226ENST00000556825 CPNE6O95741 557 aa14.08□□□□□ -0.16
SHMT2-226ENST00000556825 HLA-DRAP01903 254 aa14.08□□□□□ -0.16
SHMT2-226ENST00000556825 DNAJB2P25686 324 aa14.08□□□□□ -0.16
SHMT2-226ENST00000556825 CCND2P30279 289 aa14.08□□□□□ -0.16
SHMT2-226ENST00000556825 PSMC2P35998 433 aaKnown RBP14.08□□□□□ -0.16
SHMT2-226ENST00000556825 ABCG1P45844 678 aa14.08□□□□□ -0.16
SHMT2-226ENST00000556825 OLR1P78380 273 aa14.08□□□□□ -0.16
SHMT2-226ENST00000556825 TAP1Q03518 808 aa14.08□□□□□ -0.16
SHMT2-226ENST00000556825 BST2Q10589 180 aaKnown RBP14.08□□□□□ -0.16
SHMT2-226ENST00000556825 AP3B2Q13367 1082 aa14.08□□□□□ -0.16
SHMT2-226ENST00000556825 FASTKD3Q14CZ7 662 aaKnown RBP14.08□□□□□ -0.16
SHMT2-226ENST00000556825 LMBR1LQ6UX01 489 aa14.08□□□□□ -0.16
SHMT2-226ENST00000556825 GSTA5Q7RTV2 222 aa14.08□□□□□ -0.16
SHMT2-226ENST00000556825 ZC3H3Q8IXZ2 948 aaKnown RBP14.08□□□□□ -0.16
SHMT2-226ENST00000556825 FLCNQ8NFG4 579 aa14.08□□□□□ -0.16
SHMT2-226ENST00000556825 LRRC20Q8TCA0 184 aa14.08□□□□□ -0.16
SHMT2-226ENST00000556825 PDCD6IPQ8WUM4 868 aaKnown RBP14.08□□□□□ -0.16
SHMT2-226ENST00000556825 CEP95Q96GE4 821 aa14.08□□□□□ -0.16
SHMT2-226ENST00000556825 CSF3RQ99062 836 aa14.08□□□□□ -0.16
SHMT2-226ENST00000556825 RTKNQ9BST9 563 aa14.08□□□□□ -0.16
SHMT2-226ENST00000556825 ERVMER34-1Q9H9K5 563 aa14.08□□□□□ -0.16
SHMT2-226ENST00000556825 FANCFQ9NPI8 374 aa14.08□□□□□ -0.16
SHMT2-226ENST00000556825 DUS2Q9NX74 493 aaKnown RBP14.08□□□□□ -0.16
SHMT2-226ENST00000556825 BTG4Q9NY30 223 aa14.08□□□□□ -0.16
SHMT2-226ENST00000556825 TAS2R14Q9NYV8 317 aa14.08□□□□□ -0.16
SHMT2-226ENST00000556825 VPS28Q9UK41 221 aa14.08□□□□□ -0.16
SHMT2-226ENST00000556825 BOLA1Q9Y3E2 137 aa14.08□□□□□ -0.16
SHMT2-226ENST00000556825 GLI3P10071 1580 aa14.08□□□□□ -0.16
SHMT2-226ENST00000556825 SHANK3Q9BYB0 1731 aa14.07□□□□□ -0.16
SHMT2-226ENST00000556825 NOP56O00567 594 aaKnown RBP14.07□□□□□ -0.16
SHMT2-226ENST00000556825 TOR1AO14656 332 aa14.07□□□□□ -0.16
SHMT2-226ENST00000556825 GAS2O43903 313 aaKnown RBP14.07□□□□□ -0.16
SHMT2-226ENST00000556825 NDST3O95803 873 aa14.07□□□□□ -0.16
SHMT2-226ENST00000556825 ITGB3P05106 788 aa14.07□□□□□ -0.16
SHMT2-226ENST00000556825 JUNBP17275 347 aaPredicted RBP14.07□□□□□ -0.16
SHMT2-226ENST00000556825 TNFAIP3P21580 790 aa14.07□□□□□ -0.16
SHMT2-226ENST00000556825 SOX5P35711 763 aa14.07□□□□□ -0.16
SHMT2-226ENST00000556825 HARS2P49590 506 aaKnown RBP14.07□□□□□ -0.16
SHMT2-226ENST00000556825 BNIP2Q12982 314 aa14.07□□□□□ -0.16
SHMT2-226ENST00000556825 MMRN1Q13201 1228 aa14.07□□□□□ -0.16
SHMT2-226ENST00000556825 MAPK11Q15759 364 aa14.07□□□□□ -0.16
SHMT2-226ENST00000556825 KIZQ2M2Z5 673 aa14.07□□□□□ -0.16
SHMT2-226ENST00000556825 TEX44Q53QW1 395 aa14.07□□□□□ -0.16
SHMT2-226ENST00000556825 UTS2BQ765I0 119 aa14.07□□□□□ -0.16
SHMT2-226ENST00000556825 BHLHE22Q8NFJ8 381 aaPredicted RBP14.07□□□□□ -0.16
SHMT2-226ENST00000556825 CDC26Q8NHZ8 85 aa14.07□□□□□ -0.16
SHMT2-226ENST00000556825 SEPT1Q8WYJ6 367 aa14.07□□□□□ -0.16
SHMT2-226ENST00000556825 MARC2Q969Z3 335 aa14.07□□□□□ -0.16
SHMT2-226ENST00000556825 HDAC11Q96DB2 347 aa14.07□□□□□ -0.16
SHMT2-226ENST00000556825 CALML4Q96GE6 196 aa14.07□□□□□ -0.16
SHMT2-226ENST00000556825 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms