RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 SHISA7A6NL88 538 aa17.88■□□□□ 0.45
TUBB3-211ENST00000556536 OR1E1P30953 314 aa17.88■□□□□ 0.45
TUBB3-211ENST00000556536 CXCR5P32302 372 aa17.88■□□□□ 0.45
TUBB3-211ENST00000556536 CTHP32929 405 aa17.88■□□□□ 0.45
TUBB3-211ENST00000556536 CD70P32970 193 aa17.88■□□□□ 0.45
TUBB3-211ENST00000556536 COPS2P61201 443 aa17.88■□□□□ 0.45
TUBB3-211ENST00000556536 CDH18Q13634 790 aa17.88■□□□□ 0.45
TUBB3-211ENST00000556536 TFDP3Q5H9I0 405 aa17.88■□□□□ 0.45
TUBB3-211ENST00000556536 SYT10Q6XYQ8 523 aa17.88■□□□□ 0.45
TUBB3-211ENST00000556536 RFX6Q8HWS3 928 aa17.88■□□□□ 0.45
TUBB3-211ENST00000556536 PHTF2Q8N3S3 785 aa17.88■□□□□ 0.45
TUBB3-211ENST00000556536 NPWQ8N729 165 aa17.88■□□□□ 0.45
TUBB3-211ENST00000556536 SLC2A11Q9BYW1 496 aa17.88■□□□□ 0.45
TUBB3-211ENST00000556536 NOL6Q9H6R4 1146 aaKnown RBP17.88■□□□□ 0.45
TUBB3-211ENST00000556536 FBRSL1Q9HCM7 1045 aaKnown RBP17.88■□□□□ 0.45
TUBB3-211ENST00000556536 ABCB8Q9NUT2 735 aa17.88■□□□□ 0.45
TUBB3-211ENST00000556536 CFAP54Q96N23 3096 aa17.87■□□□□ 0.45
TUBB3-211ENST00000556536 RHOCP08134 193 aa17.87■□□□□ 0.45
TUBB3-211ENST00000556536 MZF1P28698 734 aaPredicted RBP17.87■□□□□ 0.45
TUBB3-211ENST00000556536 HLA-FP30511 346 aa17.87■□□□□ 0.45
TUBB3-211ENST00000556536 PTPN7P35236 360 aa17.87■□□□□ 0.45
TUBB3-211ENST00000556536 MAPKAPK2P49137 400 aa17.87■□□□□ 0.45
TUBB3-211ENST00000556536 DGKGP49619 791 aa17.87■□□□□ 0.45
TUBB3-211ENST00000556536 NUMBP49757 651 aa17.87■□□□□ 0.45
TUBB3-211ENST00000556536 DYNLT1P63172 113 aa17.87■□□□□ 0.45
TUBB3-211ENST00000556536 KDSRQ06136 332 aa17.87■□□□□ 0.45
TUBB3-211ENST00000556536 LMAN2Q12907 356 aa17.87■□□□□ 0.45
TUBB3-211ENST00000556536 PPP2R5EQ16537 467 aa17.87■□□□□ 0.45
TUBB3-211ENST00000556536 RNF219Q5W0B1 726 aaPredicted RBP17.87■□□□□ 0.45
TUBB3-211ENST00000556536 NCBP2-AS2Q69YL0 99 aa17.87■□□□□ 0.45
TUBB3-211ENST00000556536 SLC9A4Q6AI14 798 aa17.87■□□□□ 0.45
TUBB3-211ENST00000556536 TMCO3Q6UWJ1 677 aa17.87■□□□□ 0.45
TUBB3-211ENST00000556536 TRIM67Q6ZTA4 783 aa17.87■□□□□ 0.45
TUBB3-211ENST00000556536 SETD3Q86TU7 594 aaPredicted RBP17.87■□□□□ 0.45
TUBB3-211ENST00000556536 TP53INP2Q8IXH6 220 aa17.87■□□□□ 0.45
TUBB3-211ENST00000556536 PBXIP1Q96AQ6 731 aa17.87■□□□□ 0.45
TUBB3-211ENST00000556536 CELF6Q96J87 481 aaKnown RBP17.87■□□□□ 0.45
TUBB3-211ENST00000556536 NAPGQ99747 312 aaPredicted RBP17.87■□□□□ 0.45
TUBB3-211ENST00000556536 MAK16Q9BXY0 300 aaKnown RBP17.87■□□□□ 0.45
TUBB3-211ENST00000556536 OSBPL8Q9BZF1 889 aa17.87■□□□□ 0.45
TUBB3-211ENST00000556536 CARD9Q9H257 536 aa17.87■□□□□ 0.45
TUBB3-211ENST00000556536 RETREG1Q9H6L5 497 aa17.87■□□□□ 0.45
TUBB3-211ENST00000556536 C8orf33Q9H7E9 229 aaPredicted RBP17.87■□□□□ 0.45
TUBB3-211ENST00000556536 DEC1Q9P2X7 70 aa17.87■□□□□ 0.45
TUBB3-211ENST00000556536 CA14Q9ULX7 337 aa17.87■□□□□ 0.45
TUBB3-211ENST00000556536 SNX12Q9UMY4 172 aa17.87■□□□□ 0.45
TUBB3-211ENST00000556536 COL4A2P08572 1712 aa17.86■□□□□ 0.45
TUBB3-211ENST00000556536 CTAGE9A4FU28 777 aa17.86■□□□□ 0.45
TUBB3-211ENST00000556536 TMEM221A6NGB7 291 aa17.86■□□□□ 0.45
TUBB3-211ENST00000556536 M0R296 226 aa17.86■□□□□ 0.45
TUBB3-211ENST00000556536 CST8O60676 142 aa17.86■□□□□ 0.45
TUBB3-211ENST00000556536 CSKP41240 450 aa17.86■□□□□ 0.45
TUBB3-211ENST00000556536 GALK1P51570 392 aa17.86■□□□□ 0.45
TUBB3-211ENST00000556536 MLF2Q15773 248 aaPredicted RBP17.86■□□□□ 0.45
TUBB3-211ENST00000556536 GEN1Q17RS7 908 aa17.86■□□□□ 0.45
TUBB3-211ENST00000556536 C6orf118Q5T5N4 469 aa17.86■□□□□ 0.45
TUBB3-211ENST00000556536 AFMIDQ63HM1 303 aa17.86■□□□□ 0.45
TUBB3-211ENST00000556536 GRAMD4Q6IC98 578 aa17.86■□□□□ 0.45
TUBB3-211ENST00000556536 TPRG1Q6ZUI0 275 aa17.86■□□□□ 0.45
TUBB3-211ENST00000556536 RALGPS2Q86X27 583 aaPredicted RBP17.86■□□□□ 0.45
TUBB3-211ENST00000556536 CCDC117Q8IWD4 279 aaPredicted RBP17.86■□□□□ 0.45
TUBB3-211ENST00000556536 SFTPA1Q8IWL2 248 aa17.86■□□□□ 0.45
TUBB3-211ENST00000556536 ARHGAP12Q8IWW6 846 aa17.86■□□□□ 0.45
TUBB3-211ENST00000556536 SUGP1Q8IWZ8 645 aaKnown RBP17.86■□□□□ 0.45
TUBB3-211ENST00000556536 UBALD2Q8IYN6 164 aa17.86■□□□□ 0.45
TUBB3-211ENST00000556536 UMODL1-AS1Q8N2C9 162 aa17.86■□□□□ 0.45
TUBB3-211ENST00000556536 PLD5Q8N7P1 536 aa17.86■□□□□ 0.45
TUBB3-211ENST00000556536 ALG14Q96F25 216 aa17.86■□□□□ 0.45
TUBB3-211ENST00000556536 GGA2Q9UJY4 613 aa17.86■□□□□ 0.45
TUBB3-211ENST00000556536 OR51B4Q9Y5P0 310 aa17.86■□□□□ 0.45
TUBB3-211ENST00000556536 A0A0D9SEW6 157 aa17.85■□□□□ 0.45
TUBB3-211ENST00000556536 TCRBV7S2A1N4TA0A589 114 aa17.85■□□□□ 0.45
TUBB3-211ENST00000556536 ILVBLA1L0T0 632 aa17.85■□□□□ 0.45
TUBB3-211ENST00000556536 KRBA1A5PL33 1030 aa17.85■□□□□ 0.45
TUBB3-211ENST00000556536 APOL1O14791 398 aa17.85■□□□□ 0.45
TUBB3-211ENST00000556536 MFSD11O43934 449 aa17.85■□□□□ 0.45
TUBB3-211ENST00000556536 GLULP15104 373 aa17.85■□□□□ 0.45
TUBB3-211ENST00000556536 CASQ1P31415 396 aa17.85■□□□□ 0.45
TUBB3-211ENST00000556536 ACVRL1P37023 503 aa17.85■□□□□ 0.45
TUBB3-211ENST00000556536 EIF2DP41214 584 aaKnown RBP17.85■□□□□ 0.45
TUBB3-211ENST00000556536 GNA12Q03113 381 aa17.85■□□□□ 0.45
TUBB3-211ENST00000556536 GBE1Q04446 702 aa17.85■□□□□ 0.45
TUBB3-211ENST00000556536 PAFAH1B3Q15102 231 aaKnown RBP17.85■□□□□ 0.45
TUBB3-211ENST00000556536 SEL1L2Q5TEA6 688 aa17.85■□□□□ 0.45
TUBB3-211ENST00000556536 PAPD7Q5XG87 772 aaKnown RBP17.85■□□□□ 0.45
TUBB3-211ENST00000556536 C1orf228Q6PIY5 440 aa17.85■□□□□ 0.45
TUBB3-211ENST00000556536 NPNTQ6UXI9 565 aa17.85■□□□□ 0.45
TUBB3-211ENST00000556536 KIAA0907Q7Z7F0 614 aaPredicted RBP17.85■□□□□ 0.45
TUBB3-211ENST00000556536 APCDD1Q8J025 514 aa17.85■□□□□ 0.45
TUBB3-211ENST00000556536 CCDC33Q8N5R6 958 aa17.85■□□□□ 0.45
TUBB3-211ENST00000556536 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.85■□□□□ 0.45
TUBB3-211ENST00000556536 OR7D4Q8NG98 312 aa17.85■□□□□ 0.45
TUBB3-211ENST00000556536 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.85■□□□□ 0.45
TUBB3-211ENST00000556536 COG1Q8WTW3 980 aa17.85■□□□□ 0.45
TUBB3-211ENST00000556536 OSBPL9Q96SU4 736 aa17.85■□□□□ 0.45
TUBB3-211ENST00000556536 PNKPQ96T60 521 aa17.85■□□□□ 0.45
TUBB3-211ENST00000556536 P2RY13Q9BPV8 354 aa17.85■□□□□ 0.45
TUBB3-211ENST00000556536 FEM1AQ9BSK4 669 aa17.85■□□□□ 0.45
TUBB3-211ENST00000556536 SLC39A8Q9C0K1 460 aa17.85■□□□□ 0.45
TUBB3-211ENST00000556536 LRRC19Q9H756 370 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms