RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 VAV3Q9UKW4 847 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 PACSIN2Q9UNF0 486 aaPredicted RBP6.35□□□□□ -1.39
TDP1-215ENST00000556498 STX8Q9UNK0 236 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 GINS2Q9Y248 185 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 RPH3AQ9Y2J0 694 aaPredicted RBP6.35□□□□□ -1.39
TDP1-215ENST00000556498 PCDHGA1Q9Y5H4 931 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 PCDHA5Q9Y5H7 936 aa6.35□□□□□ -1.39
TDP1-215ENST00000556498 KLF2Q9Y5W3 355 aaPredicted RBP6.35□□□□□ -1.39
TDP1-215ENST00000556498 CCDC18Q5T9S5 1454 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 HFM1A2PYH4 1435 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 NCOA1Q15788 1441 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 MROH7-TTC4A0A0A0MT08 1334 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 MAP3K15Q6ZN16 1313 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 KDM3AQ9Y4C1 1321 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 ESYT3A0FGR9 886 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 PMS2P1A4D2B8 440 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 VPS37CA5D8V6 355 aaPredicted RBP6.34□□□□□ -1.39
TDP1-215ENST00000556498 NCF1BA6NI72 391 aaPredicted RBP6.34□□□□□ -1.39
TDP1-215ENST00000556498 PCP4L1A6NKN8 68 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 CCT8L1PA6NM43 557 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 NCF1CA8MVU1 366 aaPredicted RBP6.34□□□□□ -1.39
TDP1-215ENST00000556498 EVPLLA8MZ36 301 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 GPR89AB7ZAQ6 455 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 ATP6V1G2-DDX39BF2Z307 99 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 H3BUI4 141 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 TRAF5O00463 557 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 CIAO1O76071 339 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 MYO1DO94832 1006 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 SLITRK5O94991 958 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 LARGE1O95461 756 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 SNAP29O95721 258 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 GALTP07902 379 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 GPR89BP0CG08 455 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 ACRP10323 421 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 NQO1P15559 274 aaKnown RBP6.34□□□□□ -1.39
TDP1-215ENST00000556498 PDE6AP16499 860 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 KCNA3P22001 575 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 F8A1P23610 371 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 EEF1DP29692 281 aaKnown RBP6.34□□□□□ -1.39
TDP1-215ENST00000556498 RRM2P31350 389 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 GP5P40197 560 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 CLK3P49761 638 aaKnown RBP6.34□□□□□ -1.39
TDP1-215ENST00000556498 RGS19P49795 217 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 GALK1P51570 392 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 ATXN1P54253 815 aaKnown RBP6.34□□□□□ -1.39
TDP1-215ENST00000556498 CDH6P55285 790 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 RNASE9P60153 205 aaKnown RBP6.34□□□□□ -1.39
TDP1-215ENST00000556498 ASIC1P78348 528 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 PRKCQQ04759 706 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 ADAM15Q13444 863 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 ZMYND11Q15326 602 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 TRADDQ15628 312 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 PPP2R5EQ16537 467 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 SLC45A4Q5BKX6 768 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 ATAD3BQ5T9A4 648 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 C1orf146Q5VVC0 180 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 SLC30A6Q6NXT4 461 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 ARMCX5Q6P1M9 558 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 C3orf33Q6P1S2 294 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 CASC4Q6P4E1 433 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 PAOXQ6QHF9 649 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 ZNF852Q6ZMS4 543 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 TMTC3Q6ZXV5 915 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 EPM2AIP1Q7L775 607 aaPredicted RBP6.34□□□□□ -1.39
TDP1-215ENST00000556498 UBE3BQ7Z3V4 1068 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 ZSWIM9Q86XI8 627 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 KSR1Q8IVT5 923 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 MCEMP1Q8IX19 187 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 SYCE1Q8N0S2 351 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 IQCKQ8N0W5 287 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 ANKRD13CQ8N6S4 541 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 C10orf53Q8N6V4 93 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 ENDOVQ8N8Q3 282 aaKnown RBP6.34□□□□□ -1.39
TDP1-215ENST00000556498 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.34□□□□□ -1.39
TDP1-215ENST00000556498 FAM71DQ8N9W8 422 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 MFSD2AQ8NA29 543 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 AVL9Q8NBF6 648 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 HUS1BQ8NHY5 278 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 CEP76Q8TAP6 659 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 GIPC3Q8TF64 312 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 PDCD6IPQ8WUM4 868 aaKnown RBP6.34□□□□□ -1.39
TDP1-215ENST00000556498 KCTD4Q8WVF5 259 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 USP13Q92995 863 aaPredicted RBP6.34□□□□□ -1.39
TDP1-215ENST00000556498 TP53INP1Q96A56 240 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 ZSCAN31Q96LW9 406 aaPredicted RBP6.34□□□□□ -1.39
TDP1-215ENST00000556498 BIRC8Q96P09 236 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 CAMKK2Q96RR4 588 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 SLC9A7Q96T83 725 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 DPH2Q9BQC3 489 aaPredicted RBP6.34□□□□□ -1.39
TDP1-215ENST00000556498 MENTQ9BUN1 341 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 NFKBIZQ9BYH8 718 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 RNF38Q9H0F5 515 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 MYLK2Q9H1R3 596 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 MRPS30Q9NP92 439 aaKnown RBP6.34□□□□□ -1.39
TDP1-215ENST00000556498 KCNMB3Q9NPA1 279 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 ANLNQ9NQW6 1124 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 OLA1Q9NTK5 396 aaKnown RBP6.34□□□□□ -1.39
TDP1-215ENST00000556498 TXLNGQ9NUQ3 528 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 HYPKQ9NX55 129 aa6.34□□□□□ -1.39
TDP1-215ENST00000556498 SNTG2Q9NY99 539 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms