RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 DEFB132Q7Z7B7 95 aa5.49□□□□□ -1.53
SRP54-211ENST00000556445 NEK8Q86SG6 692 aa5.49□□□□□ -1.53
SRP54-211ENST00000556445 TTC30AQ86WT1 665 aa5.49□□□□□ -1.53
SRP54-211ENST00000556445 VSIG1Q86XK7 387 aa5.49□□□□□ -1.53
SRP54-211ENST00000556445 CARNMT1Q8N4J0 409 aa5.49□□□□□ -1.53
SRP54-211ENST00000556445 ATG16L2Q8NAA4 619 aa5.49□□□□□ -1.53
SRP54-211ENST00000556445 MLKLQ8NB16 471 aa5.49□□□□□ -1.53
SRP54-211ENST00000556445 GMCL1P1Q8NEA9 526 aa5.49□□□□□ -1.53
SRP54-211ENST00000556445 MDM1Q8TC05 714 aa5.49□□□□□ -1.53
SRP54-211ENST00000556445 RIN2Q8WYP3 895 aaPredicted RBP5.49□□□□□ -1.53
SRP54-211ENST00000556445 RFFLQ8WZ73 363 aa5.49□□□□□ -1.53
SRP54-211ENST00000556445 HERVK_113Q902F9 699 aa5.49□□□□□ -1.53
SRP54-211ENST00000556445 HTRA1Q92743 480 aa5.49□□□□□ -1.53
SRP54-211ENST00000556445 CUL5Q93034 780 aa5.49□□□□□ -1.53
SRP54-211ENST00000556445 SMARCE1Q969G3 411 aa5.49□□□□□ -1.53
SRP54-211ENST00000556445 MAELQ96JY0 434 aaKnown RBP5.49□□□□□ -1.53
SRP54-211ENST00000556445 GSDMAQ96QA5 445 aa5.49□□□□□ -1.53
SRP54-211ENST00000556445 COLEC11Q9BWP8 271 aa5.49□□□□□ -1.53
SRP54-211ENST00000556445 GHITMQ9H3K2 345 aa5.49□□□□□ -1.53
SRP54-211ENST00000556445 TDRD3Q9H7E2 651 aaKnown RBP5.49□□□□□ -1.53
SRP54-211ENST00000556445 RMND1Q9NWS8 449 aa5.49□□□□□ -1.53
SRP54-211ENST00000556445 ZNF70Q9UC06 446 aaPredicted RBP5.49□□□□□ -1.53
SRP54-211ENST00000556445 ITGB1BP2Q9UKP3 347 aa5.49□□□□□ -1.53
SRP54-211ENST00000556445 PCDHA6Q9UN73 950 aa5.49□□□□□ -1.53
SRP54-211ENST00000556445 SORCS3Q9UPU3 1222 aa5.49□□□□□ -1.53
SRP54-211ENST00000556445 REXO2Q9Y3B8 237 aaKnown RBP5.49□□□□□ -1.53
SRP54-211ENST00000556445 DDTLA6NHG4 134 aaPredicted RBP5.48□□□□□ -1.53
SRP54-211ENST00000556445 YDJCA8MPS7 323 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 UBE2Q2LH0YL09 131 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 PSMD14O00487 310 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 TRIM24O15164 1050 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 PLA2G6O60733 806 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 TPM2P07951 284 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 ADH4P08319 380 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 MTHFD2P13995 350 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 ATP6V1B1P15313 513 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 KCNA2P16389 499 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 KCNA3P22001 575 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 ZFP36P26651 326 aaKnown RBP5.48□□□□□ -1.53
SRP54-211ENST00000556445 ZNF75DP51815 510 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 ZNF132P52740 706 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 GSDMDP57764 484 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 MYL5Q02045 173 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 TLE2Q04725 743 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 TCP10Q12799 353 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 SCARB2Q14108 478 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 PTPN14Q15678 1187 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 TOR2AQ5JU69 321 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 SLC30A6Q6NXT4 461 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 Q6ZVL8 140 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 ZNF627Q7L945 461 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 CATSPER4Q7RTX7 472 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 DAAM2Q86T65 1068 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 LUZP1Q86V48 1076 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 PLA2G4DQ86XP0 818 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 SYT12Q8IV01 421 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 LIX1LQ8IVB5 337 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 CPOQ8IVL8 374 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 ZNF276Q8N554 614 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 AOPEPQ8N6M6 819 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 GPR156Q8NFN8 814 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 CHURC1Q8WUH1 139 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 SLC25A43Q8WUT9 341 aaPredicted RBP5.48□□□□□ -1.53
SRP54-211ENST00000556445 NEU4Q8WWR8 484 aaPredicted RBP5.48□□□□□ -1.53
SRP54-211ENST00000556445 PIBF1Q8WXW3 757 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 LENG9Q96B70 501 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 C7orf26Q96N11 449 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 SLC2A13Q96QE2 648 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 PIGSQ96S52 555 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 IWS1Q96ST2 819 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 SLF1Q9BQI6 1058 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 NDC1Q9BTX1 674 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 MXD3Q9BW11 206 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 TXLNGYQ9BZA5 131 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 CCSER1Q9C0I3 900 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 KCNH6Q9H252 994 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 TAOK3Q9H2K8 898 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 NRDE2Q9H7Z3 1164 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 VAT1LQ9HCJ6 419 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.48□□□□□ -1.53
SRP54-211ENST00000556445 LRFN1Q9P244 771 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 TBC1D29Q9UFV1 150 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 SIK3Q9Y2K2 1263 aa5.48□□□□□ -1.53
SRP54-211ENST00000556445 FER1L6Q2WGJ9 1857 aa5.47□□□□□ -1.53
SRP54-211ENST00000556445 VWA3AA6NCI4 1184 aa5.47□□□□□ -1.53
SRP54-211ENST00000556445 AHRRA9YTQ3 701 aa5.47□□□□□ -1.53
SRP54-211ENST00000556445 B5MCH6 92 aa5.47□□□□□ -1.53
SRP54-211ENST00000556445 IPO5O00410 1097 aaKnown RBP5.47□□□□□ -1.53
SRP54-211ENST00000556445 SYT5O00445 386 aa5.47□□□□□ -1.53
SRP54-211ENST00000556445 WNT10BO00744 389 aa5.47□□□□□ -1.53
SRP54-211ENST00000556445 NPC1O15118 1278 aa5.47□□□□□ -1.53
SRP54-211ENST00000556445 CCNT1O60563 726 aaKnown RBP5.47□□□□□ -1.53
SRP54-211ENST00000556445 PHF2O75151 1096 aa5.47□□□□□ -1.53
SRP54-211ENST00000556445 HSPA4LO95757 839 aa5.47□□□□□ -1.53
SRP54-211ENST00000556445 APOA4P06727 396 aa5.47□□□□□ -1.53
SRP54-211ENST00000556445 OR52Z1P0C646 297 aa5.47□□□□□ -1.53
SRP54-211ENST00000556445 GOLGA8HP0CJ92 632 aa5.47□□□□□ -1.53
SRP54-211ENST00000556445 HARSP12081 509 aaKnown RBP5.47□□□□□ -1.53
SRP54-211ENST00000556445 EEF2P13639 858 aaKnown RBP5.47□□□□□ -1.53
SRP54-211ENST00000556445 OSMP13725 252 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms