RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 LAMB4A4D0S4 1761 aa15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 B4GALT5O43286 388 aa15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 POU4F1Q01851 419 aa15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 CHRNB3Q05901 458 aa15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 CDC16Q13042 620 aa15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 RALGPS1Q5JS13 557 aa15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 EEF1DP3Q658K8 133 aa15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 NAT8LQ8N9F0 302 aa15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 NETO2Q8NC67 525 aa15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 SEPHS2Q99611 448 aa15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 PRDM12Q9H4Q4 367 aa15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 FAM95CA0A1B0GW59 222 aa15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 ZNF839A8K0R7 811 aa15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 LRPAP1P30533 357 aa15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 ATP1A4Q13733 1029 aa15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 FAM228AQ86W67 206 aa15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 EDEM1Q92611 657 aa15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 KCTD14Q9BQ13 255 aaPredicted RBP15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 THUMPD3Q9BV44 507 aaKnown RBP15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 CDHR5Q9HBB8 845 aa15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 NCF1BA6NI72 391 aaPredicted RBP15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 NCF1CA8MVU1 366 aaPredicted RBP15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 TRIM38O00635 465 aa15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 ZNF862O60290 1169 aa15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 ZBTB7AO95365 584 aa15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 APOA1P02647 267 aa15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 NCF1P14598 390 aaPredicted RBP15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 CDH2P19022 906 aaPredicted RBP15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 GPX6P59796 221 aa15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 TXNRD3NBQ6F5E7 133 aa15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 CCDC81Q6ZN84 652 aa15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 KIAA2013Q8IYS2 634 aa15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 ZNF483Q8TF39 744 aaPredicted RBP15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 NAT14Q8WUY8 206 aa15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 WDR60Q8WVS4 1066 aa15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 SPATC1LQ9H0A9 340 aa15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 WDR55Q9H6Y2 383 aaPredicted RBP15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 COPG2Q9UBF2 871 aa15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 TCRBV7S3A2A0A539 114 aa15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 RRN3P2A6NIE6 340 aa15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 VNN1O95497 513 aa15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 NEK2P51955 445 aa15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 EN1Q05925 392 aaPredicted RBP15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 PATL1Q86TB9 770 aaKnown RBP15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 IL22Q9GZX6 179 aa15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 RBM22Q9NW64 420 aaKnown RBP eCLIP15.31■□□□□ 0.043e-6■□□□□ 11
ARHGEF40-207ENST00000556399 SLC7A8Q9UHI5 535 aa15.31■□□□□ 0.04
ARHGEF40-207ENST00000556399 TIAM2Q8IVF5 1701 aa15.3■□□□□ 0.04
ARHGEF40-207ENST00000556399 DAB1O75553 588 aa15.3■□□□□ 0.04
ARHGEF40-207ENST00000556399 ACTR3P61158 418 aa15.3■□□□□ 0.04
ARHGEF40-207ENST00000556399 OTUD3Q5T2D3 398 aaPredicted RBP15.3■□□□□ 0.04
ARHGEF40-207ENST00000556399 UBAP2Q5T6F2 1119 aaKnown RBP15.3■□□□□ 0.04
ARHGEF40-207ENST00000556399 TIGD7Q6NT04 549 aaPredicted RBP15.3■□□□□ 0.04
ARHGEF40-207ENST00000556399 NTPCRQ9BSD7 190 aaKnown RBP15.3■□□□□ 0.04
ARHGEF40-207ENST00000556399 BRD8Q9H0E9 1235 aa15.3■□□□□ 0.04
ARHGEF40-207ENST00000556399 SDCBP2Q9H190 292 aa15.3■□□□□ 0.04
ARHGEF40-207ENST00000556399 NDUFAF1Q9Y375 327 aa15.3■□□□□ 0.04
ARHGEF40-207ENST00000556399 AK5Q9Y6K8 562 aa15.3■□□□□ 0.04
ARHGEF40-207ENST00000556399 LRP6O75581 1613 aa15.3■□□□□ 0.04
ARHGEF40-207ENST00000556399 DAB2P98082 770 aa15.3■□□□□ 0.04
ARHGEF40-207ENST00000556399 PEX6Q13608 980 aa15.3■□□□□ 0.04
ARHGEF40-207ENST00000556399 SLC41A1Q8IVJ1 513 aa15.3■□□□□ 0.04
ARHGEF40-207ENST00000556399 EFHBQ8N7U6 833 aa15.3■□□□□ 0.04
ARHGEF40-207ENST00000556399 ATXN3LQ9H3M9 355 aa15.3■□□□□ 0.04
ARHGEF40-207ENST00000556399 CAB39LQ9H9S4 337 aa15.3■□□□□ 0.04
ARHGEF40-207ENST00000556399 SCN3BQ9NY72 215 aa15.3■□□□□ 0.04
ARHGEF40-207ENST00000556399 RRN3Q9NYV6 651 aa15.3■□□□□ 0.04
ARHGEF40-207ENST00000556399 CYP51A1Q16850 503 aa15.3■□□□□ 0.04
ARHGEF40-207ENST00000556399 NT5DC4Q86YG4 428 aa15.3■□□□□ 0.04
ARHGEF40-207ENST00000556399 SLC4A11Q8NBS3 891 aa15.3■□□□□ 0.04
ARHGEF40-207ENST00000556399 KCTD4Q8WVF5 259 aa15.3■□□□□ 0.04
ARHGEF40-207ENST00000556399 EBF4Q9BQW3 602 aa15.3■□□□□ 0.04
ARHGEF40-207ENST00000556399 DNAJC28Q9NX36 388 aa15.3■□□□□ 0.04
ARHGEF40-207ENST00000556399 PRKAG3Q9UGI9 489 aa15.3■□□□□ 0.04
ARHGEF40-207ENST00000556399 DMTF1Q9Y222 760 aa15.3■□□□□ 0.04
ARHGEF40-207ENST00000556399 CNTNAP2Q9UHC6 1331 aa15.3■□□□□ 0.04
ARHGEF40-207ENST00000556399 CICQ96RK0 1608 aaPredicted RBP15.3■□□□□ 0.04
ARHGEF40-207ENST00000556399 ZNF286BP0CG31 522 aa15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 TPSB2P20231 275 aa15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 CHRM3P20309 590 aa15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 AQP4P55087 323 aa15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 GBE1Q04446 702 aa15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 TPSAB1Q15661 275 aa15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 PPM1JQ5JR12 505 aa15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 PRMT9Q6P2P2 845 aa15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 RBBP8Q99708 897 aa15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 C9orf16Q9BUW7 83 aa15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 DDX28Q9NUL7 540 aaKnown RBP15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 ROBO1Q9Y6N7 1651 aa15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 CLASP2O75122 1294 aaKnown RBP15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 BCL10O95999 233 aa15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 AKAP5P24588 427 aa15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 GRIA3P42263 894 aa15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 CLK1P49759 484 aaKnown RBP15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 KCTD21Q4G0X4 260 aa15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 LIPMQ5VYY2 423 aa15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 RHBDF2Q6PJF5 856 aa15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 OMDQ99983 421 aa15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 XPNPEP1Q9NQW7 623 aa15.29■□□□□ 0.04
ARHGEF40-207ENST00000556399 RSL24D1Q9UHA3 163 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms