RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 SLC13A5Q86YT5 568 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-241ENST00000556374 C12orf56Q8IXR9 622 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 RIBC1Q8N443 379 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-241ENST00000556374 CERS5Q8N5B7 392 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 GPATCH11Q8N954 259 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 SLC30A5Q8TAD4 765 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-241ENST00000556374 ATP8B4Q8TF62 1192 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 KAT2BQ92831 832 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 TLCD1Q96CP7 247 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 ARHGEF26Q96DR7 871 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 HOOK2Q96ED9 719 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 BICD1Q96G01 975 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 SNF8Q96H20 258 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 RSRC1Q96IZ7 334 aaKnown RBP4.62□□□□□ -1.67
ATXN3-241ENST00000556374 CLMNQ96JQ2 1002 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 RAB3IPQ96QF0 476 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-241ENST00000556374 CDX2Q99626 313 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-241ENST00000556374 NUP85Q9BW27 656 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 ZNF341Q9BYN7 854 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 ROPN1BQ9BZX4 212 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-241ENST00000556374 NEUROG2Q9H2A3 272 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 RANBP17Q9H2T7 1088 aaKnown RBP4.62□□□□□ -1.67
ATXN3-241ENST00000556374 UNC45AQ9H3U1 944 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 ROPN1Q9HAT0 212 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-241ENST00000556374 SMURF1Q9HCE7 757 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 HAUS2Q9NVX0 235 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 GEMIN8Q9NWZ8 242 aaKnown RBP4.62□□□□□ -1.67
ATXN3-241ENST00000556374 RGL1Q9NZL6 768 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 PCYOX1Q9UHG3 505 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 FEM1BQ9UK73 627 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 GTF3C4Q9UKN8 822 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 CCPG1Q9ULG6 757 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 CBLCQ9ULV8 474 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 FZD1Q9UP38 647 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 SNX24Q9Y343 169 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 HS3ST3A1Q9Y663 406 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 ALG6Q9Y672 507 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 NFS1Q9Y697 457 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 SCINQ9Y6U3 715 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 MYH11P35749 1972 aa4.62□□□□□ -1.67
ATXN3-241ENST00000556374 IGLV3-22A0A075B6J6 115 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 DDTLA6NHG4 134 aaPredicted RBP4.61□□□□□ -1.67
ATXN3-241ENST00000556374 CCT8L1PA6NM43 557 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 ATP2A1O14983 1001 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 KIAA0391O15091 583 aaKnown RBP4.61□□□□□ -1.67
ATXN3-241ENST00000556374 RIPK2O43353 540 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 PSTPIP1O43586 416 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 ZC3H11AO75152 810 aaKnown RBP eCLIP4.61□□□□□ -1.67
ATXN3-241ENST00000556374 PSMD10O75832 226 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 MPIG6BO95866 241 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 GZMAP12544 262 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 RARGP13631 454 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 FOSL2P15408 326 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 GTF2H1P32780 548 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 HOXD13P35453 343 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 COILP38432 576 aaPredicted RBP4.61□□□□□ -1.67
ATXN3-241ENST00000556374 PIK3CAP42336 1068 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 SSR1P43307 286 aaKnown RBP4.61□□□□□ -1.67
ATXN3-241ENST00000556374 NSFP46459 744 aaKnown RBP4.61□□□□□ -1.67
ATXN3-241ENST00000556374 QARSP47897 775 aaKnown RBP4.61□□□□□ -1.67
ATXN3-241ENST00000556374 GCLMP48507 274 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 IFNAR2P48551 515 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 IL9RQ01113 521 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 CDR2Q01850 454 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 HGFACQ04756 655 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 PPATQ06203 517 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 STRN3Q13033 797 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 MTMR1Q13613 665 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 COG2Q14746 738 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 ZRSR2Q15696 482 aaKnown RBP4.61□□□□□ -1.67
ATXN3-241ENST00000556374 CYP1B1Q16678 543 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 NRN1LQ496H8 165 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 EPC2Q52LR7 807 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 ERMARDQ5T6L9 678 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 FAM102BQ5T8I3 360 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 DCAF12L1Q5VU92 463 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 KRT39Q6A163 491 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 GRAMD4Q6IC98 578 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 MFSD5Q6N075 450 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 KCNV1Q6PIU1 500 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 MAEAQ7L5Y9 396 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 OTUD6AQ7L8S5 288 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 GSTA5Q7RTV2 222 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 CEP57Q86XR8 500 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 ZNF677Q86XU0 584 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 PTRH1Q86Y79 214 aaKnown RBP4.61□□□□□ -1.67
ATXN3-241ENST00000556374 APOBEC3FQ8IUX4 373 aaKnown RBP4.61□□□□□ -1.67
ATXN3-241ENST00000556374 ARHGEF19Q8IW93 802 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 ZC3H7AQ8IWR0 971 aaKnown RBP4.61□□□□□ -1.67
ATXN3-241ENST00000556374 SPICE1Q8N0Z3 855 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 SAMD3Q8N6K7 520 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 CCDC89Q8N998 374 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 ANKRD42Q8N9B4 389 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 FBXO25Q8TCJ0 367 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 MGARPQ8TDB4 240 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 SLC20A1Q8WUM9 679 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 ATXN2LQ8WWM7 1075 aaKnown RBP4.61□□□□□ -1.67
ATXN3-241ENST00000556374 CRYGNQ8WXF5 182 aa4.61□□□□□ -1.67
ATXN3-241ENST00000556374 DLG3Q92796 817 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms