RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 FASNP49327 2511 aaKnown RBP13.72□□□□□ -0.21
TGFB3-204ENST00000556285 ITIH6Q6UXX5 1313 aa13.72□□□□□ -0.21
TGFB3-204ENST00000556285 ACACAQ13085 2346 aa13.72□□□□□ -0.21
TGFB3-204ENST00000556285 TYW5A2RUC4 315 aaKnown RBP13.72□□□□□ -0.21
TGFB3-204ENST00000556285 C10orf142B7Z368 130 aa13.72□□□□□ -0.21
TGFB3-204ENST00000556285 CBX4O00257 560 aa13.72□□□□□ -0.21
TGFB3-204ENST00000556285 PLK4O00444 970 aa13.72□□□□□ -0.21
TGFB3-204ENST00000556285 MED7O43513 233 aa13.72□□□□□ -0.21
TGFB3-204ENST00000556285 GRAP2O75791 330 aa13.72□□□□□ -0.21
TGFB3-204ENST00000556285 RNASEH2AO75792 299 aaKnown RBP13.72□□□□□ -0.21
TGFB3-204ENST00000556285 APOEP02649 317 aa13.72□□□□□ -0.21
TGFB3-204ENST00000556285 SRPRAP08240 638 aaKnown RBP13.72□□□□□ -0.21
TGFB3-204ENST00000556285 PDGFRAP16234 1089 aa13.72□□□□□ -0.21
TGFB3-204ENST00000556285 SLC8A1P32418 973 aa13.72□□□□□ -0.21
TGFB3-204ENST00000556285 GGCXP38435 758 aa13.72□□□□□ -0.21
TGFB3-204ENST00000556285 USP8P40818 1118 aa13.72□□□□□ -0.21
TGFB3-204ENST00000556285 ECT2LQ008S8 904 aa13.72□□□□□ -0.21
TGFB3-204ENST00000556285 CENPCQ03188 943 aa13.72□□□□□ -0.21
TGFB3-204ENST00000556285 IRF2BP1Q8IU81 584 aa13.72□□□□□ -0.21
TGFB3-204ENST00000556285 DEFB106AQ8N104 65 aa13.72□□□□□ -0.21
TGFB3-204ENST00000556285 ZNF557Q8N988 423 aaPredicted RBP13.72□□□□□ -0.21
TGFB3-204ENST00000556285 OR52K2Q8NGK3 314 aa13.72□□□□□ -0.21
TGFB3-204ENST00000556285 IGSF8Q969P0 613 aa13.72□□□□□ -0.21
TGFB3-204ENST00000556285 BTN2A3PQ96KV6 586 aa13.72□□□□□ -0.21
TGFB3-204ENST00000556285 THAP9Q9H5L6 903 aa13.72□□□□□ -0.21
TGFB3-204ENST00000556285 CEP83Q9Y592 693 aa13.72□□□□□ -0.21
TGFB3-204ENST00000556285 EDDM13A0A1B0GTR0 161 aa13.71□□□□□ -0.21
TGFB3-204ENST00000556285 A0A1W2PPC4 97 aa13.71□□□□□ -0.21
TGFB3-204ENST00000556285 TARSL2A2RTX5 802 aaKnown RBP13.71□□□□□ -0.21
TGFB3-204ENST00000556285 KCNU1A8MYU2 1149 aa13.71□□□□□ -0.21
TGFB3-204ENST00000556285 F5H5T6 163 aa13.71□□□□□ -0.21
TGFB3-204ENST00000556285 RNASEH1O60930 286 aaKnown RBP13.71□□□□□ -0.21
TGFB3-204ENST00000556285 PNMA6AP0CW24 399 aaPredicted RBP13.71□□□□□ -0.21
TGFB3-204ENST00000556285 CAMK2BQ13554 666 aa13.71□□□□□ -0.21
TGFB3-204ENST00000556285 SHBQ15464 509 aa13.71□□□□□ -0.21
TGFB3-204ENST00000556285 CAMK4Q16566 473 aa13.71□□□□□ -0.21
TGFB3-204ENST00000556285 MEA1Q16626 185 aa13.71□□□□□ -0.21
TGFB3-204ENST00000556285 CCDC157Q569K6 752 aa13.71□□□□□ -0.21
TGFB3-204ENST00000556285 TMPRSS7Q7RTY8 843 aa13.71□□□□□ -0.21
TGFB3-204ENST00000556285 ADAT2Q7Z6V5 191 aaKnown RBP13.71□□□□□ -0.21
TGFB3-204ENST00000556285 PDZD3Q86UT5 571 aa13.71□□□□□ -0.21
TGFB3-204ENST00000556285 GATAD2AQ86YP4 633 aa13.71□□□□□ -0.21
TGFB3-204ENST00000556285 CCDC117Q8IWD4 279 aaPredicted RBP13.71□□□□□ -0.21
TGFB3-204ENST00000556285 CCAR2Q8N163 923 aaKnown RBP13.71□□□□□ -0.21
TGFB3-204ENST00000556285 KDM1BQ8NB78 822 aa13.71□□□□□ -0.21
TGFB3-204ENST00000556285 HNRNPLLQ8WVV9 542 aaKnown RBP13.71□□□□□ -0.21
TGFB3-204ENST00000556285 SLC2A13Q96QE2 648 aa13.71□□□□□ -0.21
TGFB3-204ENST00000556285 CDC6Q99741 560 aa13.71□□□□□ -0.21
TGFB3-204ENST00000556285 OMDQ99983 421 aa13.71□□□□□ -0.21
TGFB3-204ENST00000556285 CCDC86Q9H6F5 360 aaKnown RBP13.71□□□□□ -0.21
TGFB3-204ENST00000556285 FAM204AQ9H8W3 233 aa13.71□□□□□ -0.21
TGFB3-204ENST00000556285 DDIT4Q9NX09 232 aa13.71□□□□□ -0.21
TGFB3-204ENST00000556285 ADAMTS1Q9UHI8 967 aa13.71□□□□□ -0.21
TGFB3-204ENST00000556285 SCML1Q9UN30 329 aa13.71□□□□□ -0.21
TGFB3-204ENST00000556285 ARID1BQ8NFD5 2236 aaPredicted RBP13.71□□□□□ -0.22
TGFB3-204ENST00000556285 FAM170AA1A519 330 aa13.7□□□□□ -0.22
TGFB3-204ENST00000556285 VILLO15195 856 aa13.7□□□□□ -0.22
TGFB3-204ENST00000556285 MOCS3O95396 460 aa13.7□□□□□ -0.22
TGFB3-204ENST00000556285 CCT8P50990 548 aa13.7□□□□□ -0.22
TGFB3-204ENST00000556285 PPP2CBP62714 309 aa13.7□□□□□ -0.22
TGFB3-204ENST00000556285 RACK1P63244 317 aaKnown RBP13.7□□□□□ -0.22
TGFB3-204ENST00000556285 PPP2CAP67775 309 aa13.7□□□□□ -0.22
TGFB3-204ENST00000556285 SUZ12Q15022 739 aaKnown RBP13.7□□□□□ -0.22
TGFB3-204ENST00000556285 RNF219Q5W0B1 726 aaPredicted RBP13.7□□□□□ -0.22
TGFB3-204ENST00000556285 CXorf57Q6NSI4 855 aaKnown RBP13.7□□□□□ -0.22
TGFB3-204ENST00000556285 FBXL22Q6P050 247 aa13.7□□□□□ -0.22
TGFB3-204ENST00000556285 FAM183BPQ6ZVS7 135 aa13.7□□□□□ -0.22
TGFB3-204ENST00000556285 C14orf80Q86SX3 495 aa13.7□□□□□ -0.22
TGFB3-204ENST00000556285 ATP6V0D2Q8N8Y2 350 aa13.7□□□□□ -0.22
TGFB3-204ENST00000556285 OR2T34Q8NGX1 318 aa13.7□□□□□ -0.22
TGFB3-204ENST00000556285 FRS2Q8WU20 508 aa13.7□□□□□ -0.22
TGFB3-204ENST00000556285 SHC3Q92529 594 aa13.7□□□□□ -0.22
TGFB3-204ENST00000556285 ALG14Q96F25 216 aa13.7□□□□□ -0.22
TGFB3-204ENST00000556285 PPP1R13BQ96KQ4 1090 aa13.7□□□□□ -0.22
TGFB3-204ENST00000556285 SIX2Q9NPC8 291 aa13.7□□□□□ -0.22
TGFB3-204ENST00000556285 PLCB1Q9NQ66 1216 aa13.7□□□□□ -0.22
TGFB3-204ENST00000556285 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.7□□□□□ -0.22
TGFB3-204ENST00000556285 RWDD2AQ9UIY3 292 aa13.7□□□□□ -0.22
TGFB3-204ENST00000556285 SARDHQ9UL12 918 aa13.7□□□□□ -0.22
TGFB3-204ENST00000556285 URB1O60287 2271 aaKnown RBP13.7□□□□□ -0.22
TGFB3-204ENST00000556285 TDRD6O60522 2096 aaKnown RBP13.7□□□□□ -0.22
TGFB3-204ENST00000556285 A0A1B0GTQ1 180 aa13.69□□□□□ -0.22
TGFB3-204ENST00000556285 A0A1W2PR77 199 aa13.69□□□□□ -0.22
TGFB3-204ENST00000556285 LRRC72A6NJI9 287 aa13.69□□□□□ -0.22
TGFB3-204ENST00000556285 TNFSF14O43557 240 aa13.69□□□□□ -0.22
TGFB3-204ENST00000556285 PCDHGA12O60330 932 aa13.69□□□□□ -0.22
TGFB3-204ENST00000556285 IL1BP01584 269 aa13.69□□□□□ -0.22
TGFB3-204ENST00000556285 ERBB2P04626 1255 aa13.69□□□□□ -0.22
TGFB3-204ENST00000556285 GOT1P17174 413 aa13.69□□□□□ -0.22
TGFB3-204ENST00000556285 TFE3P19532 575 aaPredicted RBP13.69□□□□□ -0.22
TGFB3-204ENST00000556285 PON1P27169 355 aa13.69□□□□□ -0.22
TGFB3-204ENST00000556285 DRD3P35462 400 aa13.69□□□□□ -0.22
TGFB3-204ENST00000556285 GRK6P43250 576 aa13.69□□□□□ -0.22
TGFB3-204ENST00000556285 PLK1P53350 603 aa13.69□□□□□ -0.22
TGFB3-204ENST00000556285 ADPRHP54922 357 aa13.69□□□□□ -0.22
TGFB3-204ENST00000556285 C21orf59P57076 290 aa13.69□□□□□ -0.22
TGFB3-204ENST00000556285 CDK17Q00537 523 aa13.69□□□□□ -0.22
TGFB3-204ENST00000556285 AUHQ13825 339 aaKnown RBP13.69□□□□□ -0.22
TGFB3-204ENST00000556285 ACAP1Q15027 740 aa13.69□□□□□ -0.22
TGFB3-204ENST00000556285 POM121L1PQ3SYA9 428 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms