RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 COL27A1Q8IZC6 1860 aaPredicted RBP14.83□□□□□ -0.04
CHMP4BP1-201ENST00000556017 ENC1O14682 589 aa14.83□□□□□ -0.04
CHMP4BP1-201ENST00000556017 P4HA2O15460 535 aa14.83□□□□□ -0.04
CHMP4BP1-201ENST00000556017 TLX3O43711 291 aaPredicted RBP14.83□□□□□ -0.04
CHMP4BP1-201ENST00000556017 MOCS2O96007 188 aaPredicted RBP14.83□□□□□ -0.04
CHMP4BP1-201ENST00000556017 GOT1P17174 413 aa14.83□□□□□ -0.04
CHMP4BP1-201ENST00000556017 TACR2P21452 398 aa14.83□□□□□ -0.04
CHMP4BP1-201ENST00000556017 EPHA8P29322 1005 aaPredicted RBP14.83□□□□□ -0.04
CHMP4BP1-201ENST00000556017 PSMD8P48556 350 aa14.83□□□□□ -0.04
CHMP4BP1-201ENST00000556017 NXPH1P58417 271 aa14.83□□□□□ -0.04
CHMP4BP1-201ENST00000556017 ST8SIA6P61647 398 aa14.83□□□□□ -0.04
CHMP4BP1-201ENST00000556017 CDH18Q13634 790 aa14.83□□□□□ -0.04
CHMP4BP1-201ENST00000556017 ARTNQ5T4W7 220 aa14.83□□□□□ -0.04
CHMP4BP1-201ENST00000556017 ADAT2Q7Z6V5 191 aaKnown RBP14.83□□□□□ -0.04
CHMP4BP1-201ENST00000556017 TMEM110Q86TL2 294 aa14.83□□□□□ -0.04
CHMP4BP1-201ENST00000556017 TMPRSS12Q86WS5 348 aa14.83□□□□□ -0.04
CHMP4BP1-201ENST00000556017 EHBP1Q8NDI1 1231 aa14.83□□□□□ -0.04
CHMP4BP1-201ENST00000556017 MAN1B1Q9UKM7 699 aa14.83□□□□□ -0.04
CHMP4BP1-201ENST00000556017 PCDHGA1Q9Y5H4 931 aa14.83□□□□□ -0.04
CHMP4BP1-201ENST00000556017 OR51B4Q9Y5P0 310 aa14.83□□□□□ -0.04
CHMP4BP1-201ENST00000556017 LRRC72A6NJI9 287 aa14.82□□□□□ -0.04
CHMP4BP1-201ENST00000556017 KCNU1A8MYU2 1149 aa14.82□□□□□ -0.04
CHMP4BP1-201ENST00000556017 E5RJQ4 531 aa14.82□□□□□ -0.04
CHMP4BP1-201ENST00000556017 E9PAM4 449 aa14.82□□□□□ -0.04
CHMP4BP1-201ENST00000556017 TRUB2O95900 331 aaKnown RBP14.82□□□□□ -0.04
CHMP4BP1-201ENST00000556017 C5AR1P21730 350 aa14.82□□□□□ -0.04
CHMP4BP1-201ENST00000556017 ITPKBP27987 946 aa14.82□□□□□ -0.04
CHMP4BP1-201ENST00000556017 RXRGP48443 463 aa14.82□□□□□ -0.04
CHMP4BP1-201ENST00000556017 PLK1P53350 603 aa14.82□□□□□ -0.04
CHMP4BP1-201ENST00000556017 C21orf59P57076 290 aa14.82□□□□□ -0.04
CHMP4BP1-201ENST00000556017 FBXL19Q6PCT2 694 aa14.82□□□□□ -0.04
CHMP4BP1-201ENST00000556017 FOXR2Q6PJQ5 311 aa14.82□□□□□ -0.04
CHMP4BP1-201ENST00000556017 WDTC1Q8N5D0 677 aa14.82□□□□□ -0.04
CHMP4BP1-201ENST00000556017 EID2Q8N6I1 236 aa14.82□□□□□ -0.04
CHMP4BP1-201ENST00000556017 GANCQ8TET4 914 aa14.82□□□□□ -0.04
CHMP4BP1-201ENST00000556017 STK32AQ8WU08 396 aa14.82□□□□□ -0.04
CHMP4BP1-201ENST00000556017 SMARCE1Q969G3 411 aa14.82□□□□□ -0.04
CHMP4BP1-201ENST00000556017 FAM149B1Q96BN6 582 aa14.82□□□□□ -0.04
CHMP4BP1-201ENST00000556017 DHTKD1Q96HY7 919 aaPredicted RBP14.82□□□□□ -0.04
CHMP4BP1-201ENST00000556017 CNDP2Q96KP4 475 aaKnown RBP14.82□□□□□ -0.04
CHMP4BP1-201ENST00000556017 OMDQ99983 421 aa14.82□□□□□ -0.04
CHMP4BP1-201ENST00000556017 DDX50Q9BQ39 737 aaKnown RBP14.82□□□□□ -0.04
CHMP4BP1-201ENST00000556017 ATP6V1DQ9Y5K8 247 aa14.82□□□□□ -0.04
CHMP4BP1-201ENST00000556017 DOCK4Q8N1I0 1966 aa14.82□□□□□ -0.04
CHMP4BP1-201ENST00000556017 BECN2A8MW95 431 aa14.81□□□□□ -0.04
CHMP4BP1-201ENST00000556017 TLR4O00206 839 aa14.81□□□□□ -0.04
CHMP4BP1-201ENST00000556017 RNF103O00237 685 aa14.81□□□□□ -0.04
CHMP4BP1-201ENST00000556017 RNASEH1O60930 286 aaKnown RBP14.81□□□□□ -0.04
CHMP4BP1-201ENST00000556017 ADH1BP00325 375 aa14.81□□□□□ -0.04
CHMP4BP1-201ENST00000556017 PDGFRAP16234 1089 aa14.81□□□□□ -0.04
CHMP4BP1-201ENST00000556017 VASPP50552 380 aaPredicted RBP14.81□□□□□ -0.04
CHMP4BP1-201ENST00000556017 MARSP56192 900 aaKnown RBP14.81□□□□□ -0.04
CHMP4BP1-201ENST00000556017 TAS2R38P59533 333 aa14.81□□□□□ -0.04
CHMP4BP1-201ENST00000556017 KCNH2Q12809 1159 aa14.81□□□□□ -0.04
CHMP4BP1-201ENST00000556017 ELAVL3Q14576 367 aaKnown RBP14.81□□□□□ -0.04
CHMP4BP1-201ENST00000556017 MEA1Q16626 185 aa14.81□□□□□ -0.04
CHMP4BP1-201ENST00000556017 SND1Q7KZF4 910 aaKnown RBP eCLIP14.81□□□□□ -0.04
CHMP4BP1-201ENST00000556017 CHSY1Q86X52 802 aa14.81□□□□□ -0.04
CHMP4BP1-201ENST00000556017 CCAR2Q8N163 923 aaKnown RBP14.81□□□□□ -0.04
CHMP4BP1-201ENST00000556017 OR14C36Q8NHC7 312 aa14.81□□□□□ -0.04
CHMP4BP1-201ENST00000556017 ZNF606Q8WXB4 792 aa14.81□□□□□ -0.04
CHMP4BP1-201ENST00000556017 SERAC1Q96JX3 654 aa14.81□□□□□ -0.04
CHMP4BP1-201ENST00000556017 BTN2A3PQ96KV6 586 aa14.81□□□□□ -0.04
CHMP4BP1-201ENST00000556017 TIGD1Q96MW7 591 aa14.81□□□□□ -0.04
CHMP4BP1-201ENST00000556017 ERVMER34-1Q9H9K5 563 aa14.81□□□□□ -0.04
CHMP4BP1-201ENST00000556017 ST7Q9NRC1 585 aa14.81□□□□□ -0.04
CHMP4BP1-201ENST00000556017 AASDHPPTQ9NRN7 309 aa14.81□□□□□ -0.04
CHMP4BP1-201ENST00000556017 I6L893 689 aaPredicted RBP14.8□□□□□ -0.04
CHMP4BP1-201ENST00000556017 RTN2O75298 545 aa14.8□□□□□ -0.04
CHMP4BP1-201ENST00000556017 RFPL3O75679 317 aa14.8□□□□□ -0.04
CHMP4BP1-201ENST00000556017 SMC2O95347 1197 aa14.8□□□□□ -0.04
CHMP4BP1-201ENST00000556017 LDOC1O95751 146 aaPredicted RBP14.8□□□□□ -0.04
CHMP4BP1-201ENST00000556017 IL1BP01584 269 aa14.8□□□□□ -0.04
CHMP4BP1-201ENST00000556017 ITGAVP06756 1048 aa14.8□□□□□ -0.04
CHMP4BP1-201ENST00000556017 C1SP09871 688 aa14.8□□□□□ -0.04
CHMP4BP1-201ENST00000556017 ACADSBP45954 432 aa14.8□□□□□ -0.04
CHMP4BP1-201ENST00000556017 YWHAZP63104 245 aaKnown RBP14.8□□□□□ -0.04
CHMP4BP1-201ENST00000556017 CENPCQ03188 943 aa14.8□□□□□ -0.04
CHMP4BP1-201ENST00000556017 RTP5Q14D33 572 aa14.8□□□□□ -0.04
CHMP4BP1-201ENST00000556017 AGBL4Q5VU57 503 aa14.8□□□□□ -0.04
CHMP4BP1-201ENST00000556017 OTUD1Q5VV17 481 aaPredicted RBP14.8□□□□□ -0.04
CHMP4BP1-201ENST00000556017 GJB7Q6PEY0 223 aa14.8□□□□□ -0.04
CHMP4BP1-201ENST00000556017 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.8□□□□□ -0.04
CHMP4BP1-201ENST00000556017 SLC2A13Q96QE2 648 aa14.8□□□□□ -0.04
CHMP4BP1-201ENST00000556017 MED15Q96RN5 788 aa14.8□□□□□ -0.04
CHMP4BP1-201ENST00000556017 INTS2Q9H0H0 1204 aaKnown RBP14.8□□□□□ -0.04
CHMP4BP1-201ENST00000556017 POPDC2Q9HBU9 364 aa14.8□□□□□ -0.04
CHMP4BP1-201ENST00000556017 GDF3Q9NR23 364 aa14.8□□□□□ -0.04
CHMP4BP1-201ENST00000556017 PPM1HQ9ULR3 514 aa14.8□□□□□ -0.04
CHMP4BP1-201ENST00000556017 TENM4Q6N022 2769 aa14.79□□□□□ -0.04
CHMP4BP1-201ENST00000556017 ASH1LQ9NR48 2969 aaKnown RBP14.79□□□□□ -0.04
CHMP4BP1-201ENST00000556017 TYW5A2RUC4 315 aaKnown RBP14.79□□□□□ -0.04
CHMP4BP1-201ENST00000556017 PSMA7O14818 248 aa14.79□□□□□ -0.04
CHMP4BP1-201ENST00000556017 SART1O43290 800 aaKnown RBP14.79□□□□□ -0.04
CHMP4BP1-201ENST00000556017 PLRG1O43660 514 aaKnown RBP14.79□□□□□ -0.04
CHMP4BP1-201ENST00000556017 ATP9BO43861 1147 aa14.79□□□□□ -0.04
CHMP4BP1-201ENST00000556017 C1QL1O75973 258 aa14.79□□□□□ -0.04
CHMP4BP1-201ENST00000556017 GIMD1P0DJR0 217 aa14.79□□□□□ -0.04
CHMP4BP1-201ENST00000556017 ABCB4P21439 1286 aa14.79□□□□□ -0.04
CHMP4BP1-201ENST00000556017 APBA1Q02410 837 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms