RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 DMXL2Q8TDJ6 3036 aa13.09□□□□□ -0.31
HNRNPC-221ENST00000555883 A0A1B0GVT2 93 aa13.09□□□□□ -0.31
HNRNPC-221ENST00000555883 A0A1W2PPC4 97 aa13.09□□□□□ -0.31
HNRNPC-221ENST00000555883 LRRC72A6NJI9 287 aa13.09□□□□□ -0.31
HNRNPC-221ENST00000555883 TTC34A8MYJ7 566 aa13.09□□□□□ -0.31
HNRNPC-221ENST00000555883 FOXN3O00409 490 aaPredicted RBP13.09□□□□□ -0.31
HNRNPC-221ENST00000555883 VILLO15195 856 aa13.09□□□□□ -0.31
HNRNPC-221ENST00000555883 MID1O15344 667 aa13.09□□□□□ -0.31
HNRNPC-221ENST00000555883 PCDHGA12O60330 932 aa13.09□□□□□ -0.31
HNRNPC-221ENST00000555883 CLDN11O75508 207 aa13.09□□□□□ -0.31
HNRNPC-221ENST00000555883 DKK1O94907 266 aa13.09□□□□□ -0.31
HNRNPC-221ENST00000555883 ERBB2P04626 1255 aa13.09□□□□□ -0.31
HNRNPC-221ENST00000555883 FTH1P19P0C7X4 201 aa13.09□□□□□ -0.31
HNRNPC-221ENST00000555883 SLC8A1P32418 973 aa13.09□□□□□ -0.31
HNRNPC-221ENST00000555883 CTSOP43234 321 aaPredicted RBP13.09□□□□□ -0.31
HNRNPC-221ENST00000555883 GABRB2P47870 512 aa13.09□□□□□ -0.31
HNRNPC-221ENST00000555883 CSNK1EP49674 416 aaKnown RBP13.09□□□□□ -0.31
HNRNPC-221ENST00000555883 CCR5P51681 352 aa13.09□□□□□ -0.31
HNRNPC-221ENST00000555883 GALCP54803 685 aa13.09□□□□□ -0.31
HNRNPC-221ENST00000555883 KIF19Q2TAC6 998 aa13.09□□□□□ -0.31
HNRNPC-221ENST00000555883 PTPN20Q4JDL3 420 aa13.09□□□□□ -0.31
HNRNPC-221ENST00000555883 BRMS1LQ5PSV4 323 aa13.09□□□□□ -0.31
HNRNPC-221ENST00000555883 SLC47A2Q86VL8 602 aa13.09□□□□□ -0.31
HNRNPC-221ENST00000555883 PASD1Q8IV76 773 aa13.09□□□□□ -0.31
HNRNPC-221ENST00000555883 DHX40Q8IX18 779 aaKnown RBP13.09□□□□□ -0.31
HNRNPC-221ENST00000555883 APCDD1Q8J025 514 aa13.09□□□□□ -0.31
HNRNPC-221ENST00000555883 TMEM35BQ8NCS4 154 aa13.09□□□□□ -0.31
HNRNPC-221ENST00000555883 OR2T34Q8NGX1 318 aa13.09□□□□□ -0.31
HNRNPC-221ENST00000555883 PTPRN2Q92932 1015 aa13.09□□□□□ -0.31
HNRNPC-221ENST00000555883 SKA1Q96BD8 255 aa13.09□□□□□ -0.31
HNRNPC-221ENST00000555883 CAMK1GQ96NX5 476 aa13.09□□□□□ -0.31
HNRNPC-221ENST00000555883 SPAG5Q96R06 1193 aa13.09□□□□□ -0.31
HNRNPC-221ENST00000555883 FAM129BQ96TA1 746 aa13.09□□□□□ -0.31
HNRNPC-221ENST00000555883 IL21RQ9HBE5 538 aa13.09□□□□□ -0.31
HNRNPC-221ENST00000555883 SLCO3A1Q9UIG8 710 aa13.09□□□□□ -0.31
HNRNPC-221ENST00000555883 ZMIZ1Q9ULJ6 1067 aa13.09□□□□□ -0.31
HNRNPC-221ENST00000555883 TBC1D30Q9Y2I9 924 aa13.09□□□□□ -0.31
HNRNPC-221ENST00000555883 PAXBP1Q9Y5B6 917 aa13.09□□□□□ -0.31
HNRNPC-221ENST00000555883 ALOX15BO15296 676 aa13.08□□□□□ -0.32
HNRNPC-221ENST00000555883 SLC7A4O43246 635 aa13.08□□□□□ -0.32
HNRNPC-221ENST00000555883 ATP9BO43861 1147 aa13.08□□□□□ -0.32
HNRNPC-221ENST00000555883 FSBPO95073 299 aa13.08□□□□□ -0.32
HNRNPC-221ENST00000555883 LSM8O95777 96 aaKnown RBP13.08□□□□□ -0.32
HNRNPC-221ENST00000555883 F9P00740 461 aa13.08□□□□□ -0.32
HNRNPC-221ENST00000555883 GOT1P17174 413 aa13.08□□□□□ -0.32
HNRNPC-221ENST00000555883 EEF1GP26641 437 aaKnown RBP13.08□□□□□ -0.32
HNRNPC-221ENST00000555883 MZF1P28698 734 aaPredicted RBP13.08□□□□□ -0.32
HNRNPC-221ENST00000555883 NUDT1P36639 197 aa13.08□□□□□ -0.32
HNRNPC-221ENST00000555883 CTSKP43235 329 aa13.08□□□□□ -0.32
HNRNPC-221ENST00000555883 AUHQ13825 339 aaKnown RBP13.08□□□□□ -0.32
HNRNPC-221ENST00000555883 DPCR1Q3MIW9 517 aa13.08□□□□□ -0.32
HNRNPC-221ENST00000555883 OR6B2Q6IFH4 312 aa13.08□□□□□ -0.32
HNRNPC-221ENST00000555883 CLEC17AQ6ZS10 378 aa13.08□□□□□ -0.32
HNRNPC-221ENST00000555883 SND1Q7KZF4 910 aaKnown RBP eCLIP13.08□□□□□ -0.324e-6■■□□□ 12.7
HNRNPC-221ENST00000555883 ARCQ7LC44 396 aa13.08□□□□□ -0.32
HNRNPC-221ENST00000555883 DSG4Q86SJ6 1040 aa13.08□□□□□ -0.32
HNRNPC-221ENST00000555883 MMAAQ8IVH4 418 aaKnown RBP13.08□□□□□ -0.32
HNRNPC-221ENST00000555883 FRS2Q8WU20 508 aa13.08□□□□□ -0.32
HNRNPC-221ENST00000555883 RNF34Q969K3 372 aa13.08□□□□□ -0.32
HNRNPC-221ENST00000555883 ALG14Q96F25 216 aa13.08□□□□□ -0.32
HNRNPC-221ENST00000555883 RPRD1AQ96P16 312 aaPredicted RBP13.08□□□□□ -0.32
HNRNPC-221ENST00000555883 NPY6RQ99463 290 aa13.08□□□□□ -0.32
HNRNPC-221ENST00000555883 OMDQ99983 421 aa13.08□□□□□ -0.32
HNRNPC-221ENST00000555883 FEM1AQ9BSK4 669 aa13.08□□□□□ -0.32
HNRNPC-221ENST00000555883 NAA15Q9BXJ9 866 aaKnown RBP13.08□□□□□ -0.32
HNRNPC-221ENST00000555883 ACE2Q9BYF1 805 aaPredicted RBP13.08□□□□□ -0.32
HNRNPC-221ENST00000555883 NEUROG2Q9H2A3 272 aa13.08□□□□□ -0.32
HNRNPC-221ENST00000555883 MTG2Q9H4K7 406 aa13.08□□□□□ -0.32
HNRNPC-221ENST00000555883 SYNCQ9H7C4 482 aa13.08□□□□□ -0.32
HNRNPC-221ENST00000555883 ARHGEF38Q9NXL2 777 aa13.08□□□□□ -0.32
HNRNPC-221ENST00000555883 SERGEFQ9UGK8 458 aa13.08□□□□□ -0.32
HNRNPC-221ENST00000555883 AJAP1Q9UKB5 411 aaPredicted RBP13.08□□□□□ -0.32
HNRNPC-221ENST00000555883 KLK13Q9UKR3 277 aa13.08□□□□□ -0.32
HNRNPC-221ENST00000555883 STAP1Q9ULZ2 295 aa13.08□□□□□ -0.32
HNRNPC-221ENST00000555883 OR51B4Q9Y5P0 310 aa13.08□□□□□ -0.32
HNRNPC-221ENST00000555883 SNX11Q9Y5W9 270 aa13.08□□□□□ -0.32
HNRNPC-221ENST00000555883 SLCO1B1Q9Y6L6 691 aa13.08□□□□□ -0.32
HNRNPC-221ENST00000555883 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.07□□□□□ -0.32
HNRNPC-221ENST00000555883 A0A1W2PP55 124 aa13.07□□□□□ -0.32
HNRNPC-221ENST00000555883 M0QYT0 321 aa13.07□□□□□ -0.32
HNRNPC-221ENST00000555883 LATO43561 262 aa13.07□□□□□ -0.32
HNRNPC-221ENST00000555883 RNASEH2AO75792 299 aaKnown RBP13.07□□□□□ -0.32
HNRNPC-221ENST00000555883 CYP11B1P15538 503 aa13.07□□□□□ -0.32
HNRNPC-221ENST00000555883 PDGFRAP16234 1089 aa13.07□□□□□ -0.32
HNRNPC-221ENST00000555883 GRK6P43250 576 aa13.07□□□□□ -0.32
HNRNPC-221ENST00000555883 CXCR3P49682 368 aa13.07□□□□□ -0.32
HNRNPC-221ENST00000555883 CCT8P50990 548 aa13.07□□□□□ -0.32
HNRNPC-221ENST00000555883 ADPRHP54922 357 aa13.07□□□□□ -0.32
HNRNPC-221ENST00000555883 CDH4P55283 916 aa13.07□□□□□ -0.32
HNRNPC-221ENST00000555883 ZNF177Q13360 481 aaPredicted RBP13.07□□□□□ -0.32
HNRNPC-221ENST00000555883 INAVAQ3KP66 663 aa13.07□□□□□ -0.32
HNRNPC-221ENST00000555883 KLHDC7AQ5VTJ3 777 aa13.07□□□□□ -0.32
HNRNPC-221ENST00000555883 OTUD1Q5VV17 481 aaPredicted RBP13.07□□□□□ -0.32
HNRNPC-221ENST00000555883 NCEH1Q6PIU2 408 aa13.07□□□□□ -0.32
HNRNPC-221ENST00000555883 LRSAM1Q6UWE0 723 aa13.07□□□□□ -0.32
HNRNPC-221ENST00000555883 CHCHD4Q8N4Q1 142 aa13.07□□□□□ -0.32
HNRNPC-221ENST00000555883 AADATQ8N5Z0 425 aa13.07□□□□□ -0.32
HNRNPC-221ENST00000555883 GANCQ8TET4 914 aa13.07□□□□□ -0.32
HNRNPC-221ENST00000555883 SETD7Q8WTS6 366 aaKnown RBP13.07□□□□□ -0.32
HNRNPC-221ENST00000555883 RPL10LQ96L21 214 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms