RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 I6L893 689 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-220ENST00000555634 SGK1O00141 431 aa11.49□□□□□ -0.57
SHMT2-220ENST00000555634 TRDMT1O14717 391 aaKnown RBP11.49□□□□□ -0.57
SHMT2-220ENST00000555634 DCLK1O15075 740 aa11.49□□□□□ -0.57
SHMT2-220ENST00000555634 FANCGO15287 622 aa11.49□□□□□ -0.57
SHMT2-220ENST00000555634 CHADO15335 359 aa11.49□□□□□ -0.57
SHMT2-220ENST00000555634 ECEL1O95672 775 aa11.49□□□□□ -0.57
SHMT2-220ENST00000555634 GDI1P31150 447 aa11.49□□□□□ -0.57
SHMT2-220ENST00000555634 RPS24P62847 133 aaKnown RBP11.49□□□□□ -0.57
SHMT2-220ENST00000555634 PFKPQ01813 784 aa11.49□□□□□ -0.57
SHMT2-220ENST00000555634 ZNF33AQ06730 810 aa11.49□□□□□ -0.57
SHMT2-220ENST00000555634 FCHO2Q0JRZ9 810 aa11.49□□□□□ -0.57
SHMT2-220ENST00000555634 AP1B1Q10567 949 aa11.49□□□□□ -0.57
SHMT2-220ENST00000555634 DHX34Q14147 1143 aaKnown RBP11.49□□□□□ -0.57
SHMT2-220ENST00000555634 PPP1R7Q15435 360 aa11.49□□□□□ -0.57
SHMT2-220ENST00000555634 RNF219Q5W0B1 726 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-220ENST00000555634 IL31Q6EBC2 164 aa11.49□□□□□ -0.57
SHMT2-220ENST00000555634 CCDC137Q6PK04 289 aaKnown RBP11.49□□□□□ -0.57
SHMT2-220ENST00000555634 VITQ6UXI7 678 aa11.49□□□□□ -0.57
SHMT2-220ENST00000555634 SYDE1Q6ZW31 735 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-220ENST00000555634 ZNF572Q7Z3I7 529 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-220ENST00000555634 METTL3Q86U44 580 aaKnown RBP11.49□□□□□ -0.57
SHMT2-220ENST00000555634 ZC3H18Q86VM9 953 aaKnown RBP11.49□□□□□ -0.57
SHMT2-220ENST00000555634 ZDHHC14Q8IZN3 488 aa11.49□□□□□ -0.57
SHMT2-220ENST00000555634 UMODL1-AS1Q8N2C9 162 aa11.49□□□□□ -0.57
SHMT2-220ENST00000555634 PLD5Q8N7P1 536 aa11.49□□□□□ -0.57
SHMT2-220ENST00000555634 SPATA4Q8NEY3 305 aa11.49□□□□□ -0.57
SHMT2-220ENST00000555634 ACTL9Q8TC94 416 aa11.49□□□□□ -0.57
SHMT2-220ENST00000555634 IGSF8Q969P0 613 aa11.49□□□□□ -0.57
SHMT2-220ENST00000555634 C2orf49Q9BVC5 232 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-220ENST00000555634 CARD6Q9BX69 1037 aa11.49□□□□□ -0.57
SHMT2-220ENST00000555634 RAB17Q9H0T7 212 aa11.49□□□□□ -0.57
SHMT2-220ENST00000555634 L2HGDHQ9H9P8 463 aa11.49□□□□□ -0.57
SHMT2-220ENST00000555634 ATP13A1Q9HD20 1204 aa11.49□□□□□ -0.57
SHMT2-220ENST00000555634 MARK1Q9P0L2 795 aa11.49□□□□□ -0.57
SHMT2-220ENST00000555634 KIAA1522Q9P206 1035 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-220ENST00000555634 VPS28Q9UK41 221 aa11.49□□□□□ -0.57
SHMT2-220ENST00000555634 SLC8A2Q9UPR5 921 aa11.49□□□□□ -0.57
SHMT2-220ENST00000555634 NUMBLQ9Y6R0 609 aa11.49□□□□□ -0.57
SHMT2-220ENST00000555634 ILVBLA1L0T0 632 aa11.48□□□□□ -0.57
SHMT2-220ENST00000555634 NRG2O14511 850 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-220ENST00000555634 HOXC11O43248 304 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-220ENST00000555634 LIASO43766 372 aa11.48□□□□□ -0.57
SHMT2-220ENST00000555634 CYP17A1P05093 508 aa11.48□□□□□ -0.57
SHMT2-220ENST00000555634 ITGAVP06756 1048 aa11.48□□□□□ -0.57
SHMT2-220ENST00000555634 RBP3P10745 1247 aa11.48□□□□□ -0.57
SHMT2-220ENST00000555634 TYRP14679 529 aa11.48□□□□□ -0.57
SHMT2-220ENST00000555634 FCARP24071 287 aa11.48□□□□□ -0.57
SHMT2-220ENST00000555634 IL4RP24394 825 aa11.48□□□□□ -0.57
SHMT2-220ENST00000555634 HOXD9P28356 352 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-220ENST00000555634 TNNT3P45378 269 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-220ENST00000555634 ZXDBP98169 803 aa11.48□□□□□ -0.57
SHMT2-220ENST00000555634 DR1Q01658 176 aa11.48□□□□□ -0.57
SHMT2-220ENST00000555634 GNA12Q03113 381 aa11.48□□□□□ -0.57
SHMT2-220ENST00000555634 C2orf54Q08AI8 447 aa11.48□□□□□ -0.57
SHMT2-220ENST00000555634 GALNT2Q10471 571 aa11.48□□□□□ -0.57
SHMT2-220ENST00000555634 SNX1Q13596 522 aa11.48□□□□□ -0.57
SHMT2-220ENST00000555634 HTR4Q13639 388 aa11.48□□□□□ -0.57
SHMT2-220ENST00000555634 GRM2Q14416 872 aa11.48□□□□□ -0.57
SHMT2-220ENST00000555634 DMC1Q14565 340 aa11.48□□□□□ -0.57
SHMT2-220ENST00000555634 EML3Q32P44 896 aa11.48□□□□□ -0.57
SHMT2-220ENST00000555634 ITPRIPL2Q3MIP1 535 aa11.48□□□□□ -0.57
SHMT2-220ENST00000555634 ALFQ53S48 1182 aa11.48□□□□□ -0.57
SHMT2-220ENST00000555634 SLC45A4Q5BKX6 768 aa11.48□□□□□ -0.57
SHMT2-220ENST00000555634 LY6G5CQ5SRR4 150 aa11.48□□□□□ -0.57
SHMT2-220ENST00000555634 TMCO4Q5TGY1 634 aa11.48□□□□□ -0.57
SHMT2-220ENST00000555634 TANGO2Q6ICL3 276 aa11.48□□□□□ -0.57
SHMT2-220ENST00000555634 DRICH1Q6PGQ1 229 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-220ENST00000555634 C4orf22Q6V702 233 aa11.48□□□□□ -0.57
SHMT2-220ENST00000555634 C14orf80Q86SX3 495 aa11.48□□□□□ -0.57
SHMT2-220ENST00000555634 NLRP14Q86W24 1093 aa11.48□□□□□ -0.57
SHMT2-220ENST00000555634 CIR1Q86X95 450 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-220ENST00000555634 KLHL7Q8IXQ5 586 aa11.48□□□□□ -0.57
SHMT2-220ENST00000555634 AHI1Q8N157 1196 aa11.48□□□□□ -0.57
SHMT2-220ENST00000555634 PQLC3Q8N755 202 aa11.48□□□□□ -0.57
SHMT2-220ENST00000555634 WFIKKN2Q8TEU8 576 aa11.48□□□□□ -0.57
SHMT2-220ENST00000555634 C1orf54Q8WWF1 131 aa11.48□□□□□ -0.57
SHMT2-220ENST00000555634 HDAC11Q96DB2 347 aa11.48□□□□□ -0.57
SHMT2-220ENST00000555634 MSANTD3Q96H12 275 aa11.48□□□□□ -0.57
SHMT2-220ENST00000555634 CELF6Q96J87 481 aaKnown RBP11.48□□□□□ -0.57
SHMT2-220ENST00000555634 PPP1R2P1Q96PQ5 205 aa11.48□□□□□ -0.57
SHMT2-220ENST00000555634 QKIQ96PU8 341 aaKnown RBP eCLIP11.48□□□□□ -0.57
SHMT2-220ENST00000555634 EBF3Q9H4W6 596 aa11.48□□□□□ -0.57
SHMT2-220ENST00000555634 DTLQ9NZJ0 730 aa11.48□□□□□ -0.57
SHMT2-220ENST00000555634 PRKAG3Q9UGI9 489 aa11.48□□□□□ -0.57
SHMT2-220ENST00000555634 SLC25A13Q9UJS0 675 aa11.48□□□□□ -0.57
SHMT2-220ENST00000555634 NEU3Q9UQ49 428 aa11.48□□□□□ -0.57
SHMT2-220ENST00000555634 ANKRD36A6QL64 1941 aa11.47□□□□□ -0.57
SHMT2-220ENST00000555634 GOLGA6CA6NDK9 693 aa11.47□□□□□ -0.57
SHMT2-220ENST00000555634 GOLGA6BA6NDN3 693 aa11.47□□□□□ -0.57
SHMT2-220ENST00000555634 EFCAB8A8MWE9 144 aa11.47□□□□□ -0.57
SHMT2-220ENST00000555634 C2CD4DB7Z1M9 353 aa11.47□□□□□ -0.57
SHMT2-220ENST00000555634 RASA4BC9J798 803 aa11.47□□□□□ -0.57
SHMT2-220ENST00000555634 ANHXE9PGG2 379 aa11.47□□□□□ -0.57
SHMT2-220ENST00000555634 RASA4O43374 803 aa11.47□□□□□ -0.57
SHMT2-220ENST00000555634 CACNG3O60359 315 aa11.47□□□□□ -0.57
SHMT2-220ENST00000555634 GREM1O60565 184 aa11.47□□□□□ -0.57
SHMT2-220ENST00000555634 CNTN5O94779 1100 aa11.47□□□□□ -0.57
SHMT2-220ENST00000555634 PENKP01210 267 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-220ENST00000555634 GOLGA6DP0CG33 693 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms