RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 USP30Q70CQ3 517 aa14.23□□□□□ -0.13
PCNX4-209ENST00000555569 SND1Q7KZF4 910 aaKnown RBP eCLIP14.23□□□□□ -0.13
PCNX4-209ENST00000555569 C14orf80Q86SX3 495 aa14.23□□□□□ -0.13
PCNX4-209ENST00000555569 C1orf216Q8TAB5 229 aa14.23□□□□□ -0.13
PCNX4-209ENST00000555569 GANCQ8TET4 914 aa14.23□□□□□ -0.13
PCNX4-209ENST00000555569 PGAP3Q96FM1 320 aaPredicted RBP14.23□□□□□ -0.13
PCNX4-209ENST00000555569 PPP1R9BQ96SB3 815 aa14.23□□□□□ -0.13
PCNX4-209ENST00000555569 ADAM33Q9BZ11 813 aa14.23□□□□□ -0.13
PCNX4-209ENST00000555569 SIK2Q9H0K1 926 aa14.23□□□□□ -0.13
PCNX4-209ENST00000555569 WDCPQ9H6R7 721 aa14.23□□□□□ -0.13
PCNX4-209ENST00000555569 ANO10Q9NW15 660 aa14.23□□□□□ -0.13
PCNX4-209ENST00000555569 FANCLQ9NW38 375 aa14.23□□□□□ -0.13
PCNX4-209ENST00000555569 FBXL12Q9NXK8 326 aa14.23□□□□□ -0.13
PCNX4-209ENST00000555569 ARHGEF38Q9NXL2 777 aa14.23□□□□□ -0.13
PCNX4-209ENST00000555569 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.23□□□□□ -0.13
PCNX4-209ENST00000555569 DOCK4Q8N1I0 1966 aa14.23□□□□□ -0.13
PCNX4-209ENST00000555569 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.22□□□□□ -0.13
PCNX4-209ENST00000555569 GOLGA8SH3BPF8 625 aa14.22□□□□□ -0.13
PCNX4-209ENST00000555569 MID1O15344 667 aa14.22□□□□□ -0.13
PCNX4-209ENST00000555569 CLDN11O75508 207 aa14.22□□□□□ -0.13
PCNX4-209ENST00000555569 GFPT2O94808 682 aa14.22□□□□□ -0.13
PCNX4-209ENST00000555569 FSBPO95073 299 aa14.22□□□□□ -0.13
PCNX4-209ENST00000555569 ADCY5O95622 1261 aa14.22□□□□□ -0.13
PCNX4-209ENST00000555569 F9P00740 461 aa14.22□□□□□ -0.13
PCNX4-209ENST00000555569 NUMBP49757 651 aa14.22□□□□□ -0.13
PCNX4-209ENST00000555569 IRAK1P51617 712 aa14.22□□□□□ -0.13
PCNX4-209ENST00000555569 POLR2FP61218 127 aaKnown RBP14.22□□□□□ -0.13
PCNX4-209ENST00000555569 NOMO3P69849 1222 aa14.22□□□□□ -0.13
PCNX4-209ENST00000555569 DEUP1Q05D60 604 aa14.22□□□□□ -0.13
PCNX4-209ENST00000555569 SLC14A1Q13336 389 aa14.22□□□□□ -0.13
PCNX4-209ENST00000555569 ZNF177Q13360 481 aaPredicted RBP14.22□□□□□ -0.13
PCNX4-209ENST00000555569 SLC25A52Q3SY17 297 aa14.22□□□□□ -0.13
PCNX4-209ENST00000555569 C5orf22Q49AR2 442 aa14.22□□□□□ -0.13
PCNX4-209ENST00000555569 C2CD6Q53TS8 623 aa14.22□□□□□ -0.13
PCNX4-209ENST00000555569 NAA35Q5VZE5 725 aa14.22□□□□□ -0.13
PCNX4-209ENST00000555569 ZNF677Q86XU0 584 aa14.22□□□□□ -0.13
PCNX4-209ENST00000555569 MMAAQ8IVH4 418 aaKnown RBP14.22□□□□□ -0.13
PCNX4-209ENST00000555569 STK40Q8N2I9 435 aa14.22□□□□□ -0.13
PCNX4-209ENST00000555569 CPA5Q8WXQ8 436 aa14.22□□□□□ -0.13
PCNX4-209ENST00000555569 PTPRN2Q92932 1015 aa14.22□□□□□ -0.13
PCNX4-209ENST00000555569 NT5C3BQ969T7 300 aa14.22□□□□□ -0.13
PCNX4-209ENST00000555569 ALG14Q96F25 216 aa14.22□□□□□ -0.13
PCNX4-209ENST00000555569 FAM129BQ96TA1 746 aa14.22□□□□□ -0.13
PCNX4-209ENST00000555569 TBCBQ99426 244 aa14.22□□□□□ -0.13
PCNX4-209ENST00000555569 TKTL2Q9H0I9 626 aa14.22□□□□□ -0.13
PCNX4-209ENST00000555569 FAM207AQ9NSI2 230 aaPredicted RBP14.22□□□□□ -0.13
PCNX4-209ENST00000555569 TMEM51Q9NW97 253 aa14.22□□□□□ -0.13
PCNX4-209ENST00000555569 DAAM1Q9Y4D1 1078 aa14.22□□□□□ -0.13
PCNX4-209ENST00000555569 PAXBP1Q9Y5B6 917 aa14.22□□□□□ -0.13
PCNX4-209ENST00000555569 TP53BP1Q12888 1972 aaPredicted RBP14.22□□□□□ -0.13
PCNX4-209ENST00000555569 PLXNA2O75051 1894 aa14.21□□□□□ -0.13
PCNX4-209ENST00000555569 TMEM131Q92545 1883 aa14.21□□□□□ -0.13
PCNX4-209ENST00000555569 A0A1W2PP55 124 aa14.21□□□□□ -0.13
PCNX4-209ENST00000555569 HAX1O00165 279 aa14.21□□□□□ -0.13
PCNX4-209ENST00000555569 SLC8A1P32418 973 aa14.21□□□□□ -0.13
PCNX4-209ENST00000555569 SOX5P35711 763 aa14.21□□□□□ -0.13
PCNX4-209ENST00000555569 FLT3P36888 993 aa14.21□□□□□ -0.13
PCNX4-209ENST00000555569 PSMD8P48556 350 aa14.21□□□□□ -0.13
PCNX4-209ENST00000555569 COPB1P53618 953 aaKnown RBP14.21□□□□□ -0.13
PCNX4-209ENST00000555569 CDH4P55283 916 aa14.21□□□□□ -0.13
PCNX4-209ENST00000555569 JAM2P57087 298 aa14.21□□□□□ -0.13
PCNX4-209ENST00000555569 BNC1Q01954 994 aa14.21□□□□□ -0.13
PCNX4-209ENST00000555569 MYL5Q02045 173 aa14.21□□□□□ -0.13
PCNX4-209ENST00000555569 FOXC1Q12948 553 aa14.21□□□□□ -0.13
PCNX4-209ENST00000555569 STX1AQ16623 288 aa14.21□□□□□ -0.13
PCNX4-209ENST00000555569 IL27RAQ6UWB1 636 aa14.21□□□□□ -0.13
PCNX4-209ENST00000555569 ANKRD20A12PQ8NF67 263 aa14.21□□□□□ -0.13
PCNX4-209ENST00000555569 OR52K2Q8NGK3 314 aa14.21□□□□□ -0.13
PCNX4-209ENST00000555569 SLC20A1Q8WUM9 679 aa14.21□□□□□ -0.13
PCNX4-209ENST00000555569 BIRC7Q96CA5 298 aa14.21□□□□□ -0.13
PCNX4-209ENST00000555569 OMDQ99983 421 aa14.21□□□□□ -0.13
PCNX4-209ENST00000555569 FEM1AQ9BSK4 669 aa14.21□□□□□ -0.13
PCNX4-209ENST00000555569 NLRC4Q9NPP4 1024 aa14.21□□□□□ -0.13
PCNX4-209ENST00000555569 ANLNQ9NQW6 1124 aa14.21□□□□□ -0.13
PCNX4-209ENST00000555569 SERGEFQ9UGK8 458 aa14.21□□□□□ -0.13
PCNX4-209ENST00000555569 SLC25A13Q9UJS0 675 aa14.21□□□□□ -0.13
PCNX4-209ENST00000555569 NOCTQ9UK39 431 aaKnown RBP14.21□□□□□ -0.13
PCNX4-209ENST00000555569 SIK3Q9Y2K2 1263 aa14.21□□□□□ -0.13
PCNX4-209ENST00000555569 SPAARA0A1B0GVQ0 90 aa14.2□□□□□ -0.14
PCNX4-209ENST00000555569 A0A1B0GVT2 93 aa14.2□□□□□ -0.14
PCNX4-209ENST00000555569 FAM47DPA6NHR8 397 aa14.2□□□□□ -0.14
PCNX4-209ENST00000555569 I6L893 689 aaPredicted RBP14.2□□□□□ -0.14
PCNX4-209ENST00000555569 EPHB6O15197 1021 aa14.2□□□□□ -0.14
PCNX4-209ENST00000555569 SH3BP5O60239 455 aa14.2□□□□□ -0.14
PCNX4-209ENST00000555569 CNTN5O94779 1100 aa14.2□□□□□ -0.14
PCNX4-209ENST00000555569 CER1O95813 267 aa14.2□□□□□ -0.14
PCNX4-209ENST00000555569 ADH1BP00325 375 aa14.2□□□□□ -0.14
PCNX4-209ENST00000555569 VAV1P15498 845 aa14.2□□□□□ -0.14
PCNX4-209ENST00000555569 CD27P26842 260 aa14.2□□□□□ -0.14
PCNX4-209ENST00000555569 STAT1P42224 750 aa14.2□□□□□ -0.14
PCNX4-209ENST00000555569 CSNK1EP49674 416 aaKnown RBP14.2□□□□□ -0.14
PCNX4-209ENST00000555569 VASPP50552 380 aaPredicted RBP14.2□□□□□ -0.14
PCNX4-209ENST00000555569 AFF3P51826 1226 aaKnown RBP14.2□□□□□ -0.14
PCNX4-209ENST00000555569 SIM1P81133 766 aaPredicted RBP14.2□□□□□ -0.14
PCNX4-209ENST00000555569 FMO1Q01740 532 aa14.2□□□□□ -0.14
PCNX4-209ENST00000555569 CDR2Q01850 454 aa14.2□□□□□ -0.14
PCNX4-209ENST00000555569 HNRNPDQ14103 355 aaKnown RBP14.2□□□□□ -0.14
PCNX4-209ENST00000555569 ELAVL3Q14576 367 aaKnown RBP14.2□□□□□ -0.14
PCNX4-209ENST00000555569 SYCP1Q15431 976 aa14.2□□□□□ -0.14
PCNX4-209ENST00000555569 TEAD4Q15561 434 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms