RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 CEP192Q8TEP8 1941 aa21.1■□□□□ 0.97
VTI1B-205ENST00000555543 IGLV3-10A0A075B6K4 115 aa21.1■□□□□ 0.97
VTI1B-205ENST00000555543 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.1■□□□□ 0.97
VTI1B-205ENST00000555543 DRGXA6NNA5 263 aa21.1■□□□□ 0.97
VTI1B-205ENST00000555543 E9PAM4 449 aa21.1■□□□□ 0.97
VTI1B-205ENST00000555543 SRPRAP08240 638 aaKnown RBP21.1■□□□□ 0.97
VTI1B-205ENST00000555543 C7P10643 843 aa21.1■□□□□ 0.97
VTI1B-205ENST00000555543 TNFAIP3P21580 790 aa21.1■□□□□ 0.97
VTI1B-205ENST00000555543 ITPKAP23677 461 aa21.1■□□□□ 0.97
VTI1B-205ENST00000555543 CD6P30203 668 aa21.1■□□□□ 0.97
VTI1B-205ENST00000555543 PRKCIP41743 596 aa21.1■□□□□ 0.97
VTI1B-205ENST00000555543 CDH4P55283 916 aa21.1■□□□□ 0.97
VTI1B-205ENST00000555543 HDAC4P56524 1084 aa21.1■□□□□ 0.97
VTI1B-205ENST00000555543 ZNF177Q13360 481 aaPredicted RBP21.1■□□□□ 0.97
VTI1B-205ENST00000555543 AASDHQ4L235 1098 aaPredicted RBP21.1■□□□□ 0.97
VTI1B-205ENST00000555543 FIGNQ5HY92 759 aa21.1■□□□□ 0.97
VTI1B-205ENST00000555543 PPP1R15BQ5SWA1 713 aa21.1■□□□□ 0.97
VTI1B-205ENST00000555543 DNAJC24Q6P3W2 148 aa21.1■□□□□ 0.97
VTI1B-205ENST00000555543 KDM1BQ8NB78 822 aa21.1■□□□□ 0.97
VTI1B-205ENST00000555543 CENPIQ92674 756 aaPredicted RBP21.1■□□□□ 0.97
VTI1B-205ENST00000555543 TOE1Q96GM8 510 aaKnown RBP21.1■□□□□ 0.97
VTI1B-205ENST00000555543 C1orf74Q96LT6 269 aa21.1■□□□□ 0.97
VTI1B-205ENST00000555543 HSPA12BQ96MM6 686 aa21.1■□□□□ 0.97
VTI1B-205ENST00000555543 HAPLN3Q96S86 360 aa21.1■□□□□ 0.97
VTI1B-205ENST00000555543 EDEM3Q9BZQ6 932 aa21.1■□□□□ 0.97
VTI1B-205ENST00000555543 TMEM51Q9NW97 253 aa21.1■□□□□ 0.97
VTI1B-205ENST00000555543 WSB2Q9NYS7 404 aaPredicted RBP21.1■□□□□ 0.97
VTI1B-205ENST00000555543 MPP6Q9NZW5 540 aa21.1■□□□□ 0.97
VTI1B-205ENST00000555543 CDV3Q9UKY7 258 aaKnown RBP21.1■□□□□ 0.97
VTI1B-205ENST00000555543 TBC1D30Q9Y2I9 924 aa21.1■□□□□ 0.97
VTI1B-205ENST00000555543 GON4LQ3T8J9 2241 aa21.1■□□□□ 0.97
VTI1B-205ENST00000555543 NYNRINQ9P2P1 1898 aaKnown RBP21.09■□□□□ 0.97
VTI1B-205ENST00000555543 SIGLEC16A6NMB1 481 aa21.09■□□□□ 0.97
VTI1B-205ENST00000555543 TMCO5BA8MYB1 307 aa21.09■□□□□ 0.97
VTI1B-205ENST00000555543 FOXD2O60548 495 aaPredicted RBP21.09■□□□□ 0.97
VTI1B-205ENST00000555543 SIN3BO75182 1162 aa21.09■□□□□ 0.97
VTI1B-205ENST00000555543 IGLV3-19P01714 112 aa21.09■□□□□ 0.97
VTI1B-205ENST00000555543 GPD1P21695 349 aa21.09■□□□□ 0.97
VTI1B-205ENST00000555543 RRM1P23921 792 aa21.09■□□□□ 0.97
VTI1B-205ENST00000555543 RPS14P62263 151 aaKnown RBP21.09■□□□□ 0.97
VTI1B-205ENST00000555543 RPL7AP62424 266 aaKnown RBP21.09■□□□□ 0.97
VTI1B-205ENST00000555543 ZNF33AQ06730 810 aa21.09■□□□□ 0.97
VTI1B-205ENST00000555543 ARID5BQ14865 1188 aa21.09■□□□□ 0.97
VTI1B-205ENST00000555543 C9orf64Q5T6V5 341 aa21.09■□□□□ 0.97
VTI1B-205ENST00000555543 RNF219Q5W0B1 726 aaPredicted RBP21.09■□□□□ 0.97
VTI1B-205ENST00000555543 STRADAQ7RTN6 431 aa21.09■□□□□ 0.97
VTI1B-205ENST00000555543 TFAP2DQ7Z6R9 452 aa21.09■□□□□ 0.97
VTI1B-205ENST00000555543 NETO1Q8TDF5 533 aa21.09■□□□□ 0.97
VTI1B-205ENST00000555543 FAM172AQ8WUF8 416 aa21.09■□□□□ 0.97
VTI1B-205ENST00000555543 MCEEQ96PE7 176 aa21.09■□□□□ 0.97
VTI1B-205ENST00000555543 FEM1AQ9BSK4 669 aa21.09■□□□□ 0.97
VTI1B-205ENST00000555543 MAGEB5Q9BZ81 275 aa21.09■□□□□ 0.97
VTI1B-205ENST00000555543 IFNKQ9P0W0 207 aa21.09■□□□□ 0.97
VTI1B-205ENST00000555543 ZNF212Q9UDV6 495 aa21.09■□□□□ 0.97
VTI1B-205ENST00000555543 SUN2Q9UH99 717 aa21.09■□□□□ 0.97
VTI1B-205ENST00000555543 CCP110O43303 1012 aa21.08■□□□□ 0.97
VTI1B-205ENST00000555543 ATMINO43313 823 aaPredicted RBP21.08■□□□□ 0.97
VTI1B-205ENST00000555543 SRGAP2O75044 1071 aa21.08■□□□□ 0.97
VTI1B-205ENST00000555543 ACADMP11310 421 aa21.08■□□□□ 0.97
VTI1B-205ENST00000555543 SKILP12757 684 aa21.08■□□□□ 0.97
VTI1B-205ENST00000555543 VAV1P15498 845 aa21.08■□□□□ 0.97
VTI1B-205ENST00000555543 ADRA1BP35368 520 aa21.08■□□□□ 0.97
VTI1B-205ENST00000555543 OXCT1P55809 520 aa21.08■□□□□ 0.97
VTI1B-205ENST00000555543 PUM1Q14671 1186 aaKnown RBP eCLIP21.08■□□□□ 0.974e-9■□□□□ 10.5
VTI1B-205ENST00000555543 PEAR1Q5VY43 1037 aaPredicted RBP21.08■□□□□ 0.97
VTI1B-205ENST00000555543 LRRC31Q6UY01 552 aa21.08■□□□□ 0.97
VTI1B-205ENST00000555543 FAM124AQ86V42 546 aa21.08■□□□□ 0.97
VTI1B-205ENST00000555543 SYT12Q8IV01 421 aa21.08■□□□□ 0.97
VTI1B-205ENST00000555543 CCDC185Q8N715 623 aa21.08■□□□□ 0.97
VTI1B-205ENST00000555543 FBRSQ9HAH7 460 aa21.08■□□□□ 0.97
VTI1B-205ENST00000555543 PILRBQ9UKJ0 227 aa21.08■□□□□ 0.97
VTI1B-205ENST00000555543 DOCK4Q8N1I0 1966 aa21.07■□□□□ 0.96
VTI1B-205ENST00000555543 LNP1A1A4G5 178 aa21.07■□□□□ 0.96
VTI1B-205ENST00000555543 DDX3XO00571 662 aaKnown RBP eCLIP21.07■□□□□ 0.963e-37■■■■■ 37
VTI1B-205ENST00000555543 NDUFS2O75306 463 aa21.07■□□□□ 0.96
VTI1B-205ENST00000555543 KLHL30Q0D2K2 578 aa21.07■□□□□ 0.96
VTI1B-205ENST00000555543 ACBD5Q5T8D3 534 aaPredicted RBP21.07■□□□□ 0.96
VTI1B-205ENST00000555543 MANEALQ5VSG8 457 aa21.07■□□□□ 0.96
VTI1B-205ENST00000555543 ZNF776Q68DI1 518 aaPredicted RBP21.07■□□□□ 0.96
VTI1B-205ENST00000555543 ZNF419Q96HQ0 510 aaPredicted RBP21.07■□□□□ 0.96
VTI1B-205ENST00000555543 PSMB7Q99436 277 aa21.07■□□□□ 0.96
VTI1B-205ENST00000555543 GPR174Q9BXC1 333 aa21.07■□□□□ 0.96
VTI1B-205ENST00000555543 RSPH9Q9H1X1 276 aaPredicted RBP21.07■□□□□ 0.96
VTI1B-205ENST00000555543 VPS28Q9UK41 221 aa21.07■□□□□ 0.96
VTI1B-205ENST00000555543 NEU3Q9UQ49 428 aa21.07■□□□□ 0.96
VTI1B-205ENST00000555543 EDDM13A0A1B0GTR0 161 aa21.06■□□□□ 0.96
VTI1B-205ENST00000555543 A0A1W2PQJ5 194 aa21.06■□□□□ 0.96
VTI1B-205ENST00000555543 FAM72CH0Y354 149 aa21.06■□□□□ 0.96
VTI1B-205ENST00000555543 RHOCP08134 193 aa21.06■□□□□ 0.96
VTI1B-205ENST00000555543 ZNF143P52747 638 aaPredicted RBP21.06■□□□□ 0.96
VTI1B-205ENST00000555543 OGDHQ02218 1023 aa21.06■□□□□ 0.96
VTI1B-205ENST00000555543 SULT2A1Q06520 285 aa21.06■□□□□ 0.96
VTI1B-205ENST00000555543 NUMA1Q14980 2115 aa21.06■□□□□ 0.96
VTI1B-205ENST00000555543 FAM72AQ5TYM5 149 aa21.06■□□□□ 0.96
VTI1B-205ENST00000555543 HGSNATQ68CP4 663 aa21.06■□□□□ 0.96
VTI1B-205ENST00000555543 FAM72DQ6L9T8 149 aa21.06■□□□□ 0.96
VTI1B-205ENST00000555543 FAM72BQ86X60 149 aa21.06■□□□□ 0.96
VTI1B-205ENST00000555543 FRS2Q8WU20 508 aa21.06■□□□□ 0.96
VTI1B-205ENST00000555543 PTPRN2Q92932 1015 aa21.06■□□□□ 0.96
VTI1B-205ENST00000555543 EDEM2Q9BV94 578 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms