RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 VSTM5A8MXK1 200 aa3.41□□□□□ -1.86
SRP54-207ENST00000555535 FOXO6A8MYZ6 492 aa3.41□□□□□ -1.86
SRP54-207ENST00000555535 AREL1O15033 823 aa3.41□□□□□ -1.86
SRP54-207ENST00000555535 ZSCAN9O15535 394 aaPredicted RBP3.41□□□□□ -1.86
SRP54-207ENST00000555535 COQ9O75208 318 aa3.41□□□□□ -1.86
SRP54-207ENST00000555535 ZNF12P17014 697 aa3.41□□□□□ -1.86
SRP54-207ENST00000555535 DAG1Q14118 895 aa3.41□□□□□ -1.86
SRP54-207ENST00000555535 PPP2R5AQ15172 486 aa3.41□□□□□ -1.86
SRP54-207ENST00000555535 FAXCQ5TGI0 409 aa3.41□□□□□ -1.86
SRP54-207ENST00000555535 RAP1GAP2Q684P5 730 aa3.41□□□□□ -1.86
SRP54-207ENST00000555535 TLDC1Q6P9B6 456 aa3.41□□□□□ -1.86
SRP54-207ENST00000555535 CYB5R4Q7L1T6 521 aa3.41□□□□□ -1.86
SRP54-207ENST00000555535 KDELC2Q7Z4H8 507 aa3.41□□□□□ -1.86
SRP54-207ENST00000555535 LYG1Q8N1E2 194 aa3.41□□□□□ -1.86
SRP54-207ENST00000555535 EXD3Q8N9H8 876 aa3.41□□□□□ -1.86
SRP54-207ENST00000555535 OR14A16Q8NHC5 309 aa3.41□□□□□ -1.86
SRP54-207ENST00000555535 KAT2AQ92830 837 aa3.41□□□□□ -1.86
SRP54-207ENST00000555535 IQCDQ96DY2 449 aa3.41□□□□□ -1.86
SRP54-207ENST00000555535 FIZ1Q96SL8 496 aa3.41□□□□□ -1.86
SRP54-207ENST00000555535 BTBD1Q9H0C5 482 aa3.41□□□□□ -1.86
SRP54-207ENST00000555535 TMOD4Q9NZQ9 345 aa3.41□□□□□ -1.86
SRP54-207ENST00000555535 EID1Q9Y6B2 187 aa3.41□□□□□ -1.86
SRP54-207ENST00000555535 FRMPD2Q68DX3 1309 aaPredicted RBP3.41□□□□□ -1.86
SRP54-207ENST00000555535 OR2W5A6NFC9 320 aa3.4□□□□□ -1.87
SRP54-207ENST00000555535 CLCA1A8K7I4 914 aa3.4□□□□□ -1.87
SRP54-207ENST00000555535 DHHO43323 396 aa3.4□□□□□ -1.87
SRP54-207ENST00000555535 THAP12O43422 761 aa3.4□□□□□ -1.87
SRP54-207ENST00000555535 EDIL3O43854 480 aa3.4□□□□□ -1.87
SRP54-207ENST00000555535 PPP6R2O75170 966 aa3.4□□□□□ -1.87
SRP54-207ENST00000555535 APOHP02749 345 aaPredicted RBP3.4□□□□□ -1.87
SRP54-207ENST00000555535 RPL17P18621 184 aaKnown RBP3.4□□□□□ -1.87
SRP54-207ENST00000555535 SLC5A2P31639 672 aa3.4□□□□□ -1.87
SRP54-207ENST00000555535 TRAF1Q13077 416 aa3.4□□□□□ -1.87
SRP54-207ENST00000555535 DMP1Q13316 513 aaPredicted RBP3.4□□□□□ -1.87
SRP54-207ENST00000555535 GBX1Q14549 363 aa3.4□□□□□ -1.87
SRP54-207ENST00000555535 PLEKHG6Q3KR16 790 aa3.4□□□□□ -1.87
SRP54-207ENST00000555535 CAMK1DQ8IU85 385 aa3.4□□□□□ -1.87
SRP54-207ENST00000555535 ATP11CQ8NB49 1132 aa3.4□□□□□ -1.87
SRP54-207ENST00000555535 OR52N4Q8NGI2 321 aa3.4□□□□□ -1.87
SRP54-207ENST00000555535 FBXO17Q96EF6 278 aa3.4□□□□□ -1.87
SRP54-207ENST00000555535 ZMYND8Q9ULU4 1186 aaPredicted RBP3.4□□□□□ -1.87
SRP54-207ENST00000555535 CORO2BQ9UQ03 480 aa3.4□□□□□ -1.87
SRP54-207ENST00000555535 SNX13Q9Y5W8 968 aa3.4□□□□□ -1.87
SRP54-207ENST00000555535 IGKV3D-15A0A087WSY6 115 aa3.39□□□□□ -1.87
SRP54-207ENST00000555535 MS4A18H0YCH9 400 aa3.39□□□□□ -1.87
SRP54-207ENST00000555535 ZG16O60844 167 aa3.39□□□□□ -1.87
SRP54-207ENST00000555535 PIK3CBP42338 1070 aa3.39□□□□□ -1.87
SRP54-207ENST00000555535 GSTM5P46439 218 aa3.39□□□□□ -1.87
SRP54-207ENST00000555535 RFX5P48382 616 aaPredicted RBP3.39□□□□□ -1.87
SRP54-207ENST00000555535 ATP12AP54707 1039 aa3.39□□□□□ -1.87
SRP54-207ENST00000555535 ATP1A4Q13733 1029 aa3.39□□□□□ -1.87
SRP54-207ENST00000555535 ARHGAP15Q53QZ3 475 aa3.39□□□□□ -1.87
SRP54-207ENST00000555535 MRNIPQ6NTE8 343 aa3.39□□□□□ -1.87
SRP54-207ENST00000555535 PPP4R4Q6NUP7 873 aa3.39□□□□□ -1.87
SRP54-207ENST00000555535 FJX1Q86VR8 437 aa3.39□□□□□ -1.87
SRP54-207ENST00000555535 RNF152Q8N8N0 203 aa3.39□□□□□ -1.87
SRP54-207ENST00000555535 TMED6Q8WW62 240 aa3.39□□□□□ -1.87
SRP54-207ENST00000555535 PGLYRP2Q96PD5 576 aa3.39□□□□□ -1.87
SRP54-207ENST00000555535 SLC25A33Q9BSK2 321 aa3.39□□□□□ -1.87
SRP54-207ENST00000555535 PCDHAC1Q9H158 963 aa3.39□□□□□ -1.87
SRP54-207ENST00000555535 MAGEH1Q9H213 219 aa3.39□□□□□ -1.87
SRP54-207ENST00000555535 PNPLA8Q9NP80 782 aa3.39□□□□□ -1.87
SRP54-207ENST00000555535 KCNJ13O60928 360 aa3.38□□□□□ -1.87
SRP54-207ENST00000555535 CNTN5O94779 1100 aa3.38□□□□□ -1.87
SRP54-207ENST00000555535 LCKP06239 509 aa3.38□□□□□ -1.87
SRP54-207ENST00000555535 PECAM1P16284 738 aaPredicted RBP3.38□□□□□ -1.87
SRP54-207ENST00000555535 AMD1P17707 334 aa3.38□□□□□ -1.87
SRP54-207ENST00000555535 FGFR2P21802 821 aa3.38□□□□□ -1.87
SRP54-207ENST00000555535 GABRB3P28472 473 aa3.38□□□□□ -1.87
SRP54-207ENST00000555535 SLC37A1P57057 533 aa3.38□□□□□ -1.87
SRP54-207ENST00000555535 SELENOVP59797 346 aa3.38□□□□□ -1.87
SRP54-207ENST00000555535 PMP22Q01453 160 aa3.38□□□□□ -1.87
SRP54-207ENST00000555535 ZNF543Q08ER8 600 aa3.38□□□□□ -1.87
SRP54-207ENST00000555535 MSANTD2Q6P1R3 559 aa3.38□□□□□ -1.87
SRP54-207ENST00000555535 PAQR4Q8N4S7 273 aaPredicted RBP3.38□□□□□ -1.87
SRP54-207ENST00000555535 NPIPB3Q92617 1050 aa3.38□□□□□ -1.87
SRP54-207ENST00000555535 ABHD14AQ9BUJ0 271 aa3.38□□□□□ -1.87
SRP54-207ENST00000555535 NUP62CLQ9H1M0 184 aa3.38□□□□□ -1.87
SRP54-207ENST00000555535 PRDM16Q9HAZ2 1276 aa3.38□□□□□ -1.87
SRP54-207ENST00000555535 FSCN3Q9NQT6 498 aa3.38□□□□□ -1.87
SRP54-207ENST00000555535 RNF146Q9NTX7 359 aa3.38□□□□□ -1.87
SRP54-207ENST00000555535 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.38□□□□□ -1.87
SRP54-207ENST00000555535 A0A1W2PNU3 283 aaPredicted RBP3.37□□□□□ -1.87
SRP54-207ENST00000555535 ASAP2O43150 1006 aa3.37□□□□□ -1.87
SRP54-207ENST00000555535 TSPAN6O43657 245 aa3.37□□□□□ -1.87
SRP54-207ENST00000555535 LIASO43766 372 aa3.37□□□□□ -1.87
SRP54-207ENST00000555535 NFATC1O95644 943 aa3.37□□□□□ -1.87
SRP54-207ENST00000555535 ZNF883P0CG24 379 aa3.37□□□□□ -1.87
SRP54-207ENST00000555535 P3H1Q32P28 736 aa3.37□□□□□ -1.87
SRP54-207ENST00000555535 NAGSQ8N159 534 aa3.37□□□□□ -1.87
SRP54-207ENST00000555535 POC1AQ8NBT0 407 aa3.37□□□□□ -1.87
SRP54-207ENST00000555535 ENGASEQ8NFI3 743 aa3.37□□□□□ -1.87
SRP54-207ENST00000555535 GDF15Q99988 308 aa3.37□□□□□ -1.87
SRP54-207ENST00000555535 WDR77Q9BQA1 342 aaPredicted RBP3.37□□□□□ -1.87
SRP54-207ENST00000555535 NUDT22Q9BRQ3 303 aa3.37□□□□□ -1.87
SRP54-207ENST00000555535 MAGEB5Q9BZ81 275 aa3.37□□□□□ -1.87
SRP54-207ENST00000555535 OBP2AQ9NY56 170 aa3.37□□□□□ -1.87
SRP54-207ENST00000555535 IL36RNQ9UBH0 155 aa3.37□□□□□ -1.87
SRP54-207ENST00000555535 CXorf65A6NEN9 183 aa3.36□□□□□ -1.87
SRP54-207ENST00000555535 POM121BA6NF01 834 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms