RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 ZDHHC4Q9NPG8 344 aa10.46□□□□□ -0.74
NEK9-205ENST00000555405 ATP8A1Q9Y2Q0 1164 aa10.46□□□□□ -0.74
NEK9-205ENST00000555405 PTPRDP23468 1912 aa10.46□□□□□ -0.74
NEK9-205ENST00000555405 DCLK1O15075 740 aa10.45□□□□□ -0.74
NEK9-205ENST00000555405 ERLIN1O75477 346 aa10.45□□□□□ -0.74
NEK9-205ENST00000555405 STK10O94804 968 aaKnown RBP10.45□□□□□ -0.74
NEK9-205ENST00000555405 CYBBP04839 570 aa10.45□□□□□ -0.74
NEK9-205ENST00000555405 LMNB2Q03252 620 aa10.45□□□□□ -0.74
NEK9-205ENST00000555405 TNK2Q07912 1038 aa10.45□□□□□ -0.74
NEK9-205ENST00000555405 SCAPQ12770 1279 aa10.45□□□□□ -0.74
NEK9-205ENST00000555405 OLIG2Q13516 323 aa10.45□□□□□ -0.74
NEK9-205ENST00000555405 DHX34Q14147 1143 aaKnown RBP10.45□□□□□ -0.74
NEK9-205ENST00000555405 PCSK7Q16549 785 aa10.45□□□□□ -0.74
NEK9-205ENST00000555405 LY6G5CQ5SRR4 150 aa10.45□□□□□ -0.74
NEK9-205ENST00000555405 POTEHQ6S545 545 aa10.45□□□□□ -0.74
NEK9-205ENST00000555405 BZW1Q7L1Q6 419 aaKnown RBP10.45□□□□□ -0.74
NEK9-205ENST00000555405 CDKL3Q8IVW4 592 aaPredicted RBP10.45□□□□□ -0.74
NEK9-205ENST00000555405 RYBPQ8N488 228 aaPredicted RBP10.45□□□□□ -0.74
NEK9-205ENST00000555405 RTL3Q8N8U3 475 aaKnown RBP10.45□□□□□ -0.74
NEK9-205ENST00000555405 RIN3Q8TB24 985 aa10.45□□□□□ -0.74
NEK9-205ENST00000555405 SLC35B2Q8TB61 432 aa10.45□□□□□ -0.74
NEK9-205ENST00000555405 PLD4Q96BZ4 506 aa10.45□□□□□ -0.74
NEK9-205ENST00000555405 RPL10LQ96L21 214 aaKnown RBP10.45□□□□□ -0.74
NEK9-205ENST00000555405 NT5MQ9NPB1 228 aa10.45□□□□□ -0.74
NEK9-205ENST00000555405 RBM22Q9NW64 420 aaKnown RBP eCLIP10.45□□□□□ -0.74
NEK9-205ENST00000555405 CLEC4EQ9ULY5 219 aa10.45□□□□□ -0.74
NEK9-205ENST00000555405 KIAA1671Q9BY89 1806 aa10.45□□□□□ -0.74
NEK9-205ENST00000555405 SNAP91O60641 907 aa10.45□□□□□ -0.74
NEK9-205ENST00000555405 BANF1O75531 89 aa10.45□□□□□ -0.74
NEK9-205ENST00000555405 VAV1P15498 845 aa10.45□□□□□ -0.74
NEK9-205ENST00000555405 MZF1P28698 734 aaPredicted RBP10.45□□□□□ -0.74
NEK9-205ENST00000555405 CLCN6P51797 869 aa10.45□□□□□ -0.74
NEK9-205ENST00000555405 GAD2Q05329 585 aa10.45□□□□□ -0.74
NEK9-205ENST00000555405 BBS9Q3SYG4 887 aa10.45□□□□□ -0.74
NEK9-205ENST00000555405 FSCBQ5H9T9 825 aa10.45□□□□□ -0.74
NEK9-205ENST00000555405 BNIPLQ7Z465 357 aa10.45□□□□□ -0.74
NEK9-205ENST00000555405 PSTKQ8IV42 348 aaKnown RBP10.45□□□□□ -0.74
NEK9-205ENST00000555405 YAF2Q8IY57 180 aa10.45□□□□□ -0.74
NEK9-205ENST00000555405 PLCD3Q8N3E9 789 aa10.45□□□□□ -0.74
NEK9-205ENST00000555405 OR52K2Q8NGK3 314 aa10.45□□□□□ -0.74
NEK9-205ENST00000555405 PDCD6IPQ8WUM4 868 aaKnown RBP10.45□□□□□ -0.74
NEK9-205ENST00000555405 NSMCE1Q8WV22 266 aa10.45□□□□□ -0.74
NEK9-205ENST00000555405 UBLCP1Q8WVY7 318 aaPredicted RBP10.45□□□□□ -0.74
NEK9-205ENST00000555405 NEUROG2Q9H2A3 272 aa10.45□□□□□ -0.74
NEK9-205ENST00000555405 ARFGAP3Q9NP61 516 aa10.45□□□□□ -0.74
NEK9-205ENST00000555405 GBF1Q92538 1859 aa10.45□□□□□ -0.74
NEK9-205ENST00000555405 FAM187AA6NFU0 413 aa10.45□□□□□ -0.74
NEK9-205ENST00000555405 MX2P20592 715 aa10.45□□□□□ -0.74
NEK9-205ENST00000555405 IFNAR2P48551 515 aa10.45□□□□□ -0.74
NEK9-205ENST00000555405 AIF1P55008 147 aa10.45□□□□□ -0.74
NEK9-205ENST00000555405 RING1Q06587 406 aa10.45□□□□□ -0.74
NEK9-205ENST00000555405 SLC45A4Q5BKX6 768 aa10.45□□□□□ -0.74
NEK9-205ENST00000555405 CASC4Q6P4E1 433 aa10.45□□□□□ -0.74
NEK9-205ENST00000555405 CCNI2Q6ZMN8 369 aaPredicted RBP10.45□□□□□ -0.74
NEK9-205ENST00000555405 OTOP3Q7RTS5 596 aa10.45□□□□□ -0.74
NEK9-205ENST00000555405 ALLCQ8N6M5 410 aa10.45□□□□□ -0.74
NEK9-205ENST00000555405 ADAMTS19Q8TE59 1207 aa10.45□□□□□ -0.74
NEK9-205ENST00000555405 ZFRQ96KR1 1074 aaKnown RBP10.45□□□□□ -0.74
NEK9-205ENST00000555405 MAFFQ9ULX9 164 aa10.45□□□□□ -0.74
NEK9-205ENST00000555405 NOTCH4Q99466 2003 aa10.44□□□□□ -0.74
NEK9-205ENST00000555405 PMPCBO75439 489 aa10.44□□□□□ -0.74
NEK9-205ENST00000555405 SLC4A1P02730 911 aa10.44□□□□□ -0.74
NEK9-205ENST00000555405 RHOQP17081 205 aa10.44□□□□□ -0.74
NEK9-205ENST00000555405 SEMA3BQ13214 749 aa10.44□□□□□ -0.74
NEK9-205ENST00000555405 OASLQ15646 514 aaKnown RBP10.44□□□□□ -0.74
NEK9-205ENST00000555405 FAM78AQ5JUQ0 283 aa10.44□□□□□ -0.74
NEK9-205ENST00000555405 ANKRD54Q6NXT1 300 aa10.44□□□□□ -0.74
NEK9-205ENST00000555405 NPAS3Q8IXF0 933 aa10.44□□□□□ -0.74
NEK9-205ENST00000555405 LRRC45Q96CN5 670 aa10.44□□□□□ -0.74
NEK9-205ENST00000555405 PRICKLE1Q96MT3 831 aaPredicted RBP10.44□□□□□ -0.74
NEK9-205ENST00000555405 DDX50Q9BQ39 737 aaKnown RBP10.44□□□□□ -0.74
NEK9-205ENST00000555405 CIPCQ9C0C6 399 aa10.44□□□□□ -0.74
NEK9-205ENST00000555405 PCYOX1Q9UHG3 505 aa10.44□□□□□ -0.74
NEK9-205ENST00000555405 HPCAL4Q9UM19 191 aa10.44□□□□□ -0.74
NEK9-205ENST00000555405 MTCH2Q9Y6C9 303 aa10.44□□□□□ -0.74
NEK9-205ENST00000555405 TBX10O75333 385 aa10.44□□□□□ -0.74
NEK9-205ENST00000555405 CHKAP35790 457 aa10.44□□□□□ -0.74
NEK9-205ENST00000555405 DHX9Q08211 1270 aaKnown RBP10.44□□□□□ -0.74
NEK9-205ENST00000555405 GLE1Q53GS7 698 aaKnown RBP10.44□□□□□ -0.74
NEK9-205ENST00000555405 TANGO2Q6ICL3 276 aa10.44□□□□□ -0.74
NEK9-205ENST00000555405 ANKMY2Q8IV38 441 aa10.44□□□□□ -0.74
NEK9-205ENST00000555405 OR6K2Q8NGY2 324 aa10.44□□□□□ -0.74
NEK9-205ENST00000555405 WFDC5Q8TCV5 224 aa10.44□□□□□ -0.74
NEK9-205ENST00000555405 CEP295NLQ96MC4 621 aa10.44□□□□□ -0.74
NEK9-205ENST00000555405 LRRC3BQ96PB8 259 aa10.44□□□□□ -0.74
NEK9-205ENST00000555405 RPP25Q9BUL9 199 aaKnown RBP10.44□□□□□ -0.74
NEK9-205ENST00000555405 TM6SF2Q9BZW4 377 aa10.44□□□□□ -0.74
NEK9-205ENST00000555405 DUS2Q9NX74 493 aaKnown RBP10.44□□□□□ -0.74
NEK9-205ENST00000555405 RSPH14Q9UHP6 348 aa10.44□□□□□ -0.74
NEK9-205ENST00000555405 EFR3BQ9Y2G0 817 aa10.44□□□□□ -0.74
NEK9-205ENST00000555405 TCRBV7S3A2A0A539 114 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 ARHGAP42A6NI28 874 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 HEPACAM2A8MVW5 462 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 DYNC1I1O14576 645 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 ZBTB24O43167 697 aaPredicted RBP10.43□□□□□ -0.74
NEK9-205ENST00000555405 PIAS1O75925 651 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 METTL18O95568 372 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 PSMB4P28070 264 aa10.43□□□□□ -0.74
NEK9-205ENST00000555405 STIP1P31948 543 aaKnown RBP10.43□□□□□ -0.74
NEK9-205ENST00000555405 GARSP41250 739 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms