RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 SORCS1Q8WY21 1168 aa21.12■□□□□ 0.97
FOXN3-209ENST00000555353 TRIM7Q9C029 511 aa21.12■□□□□ 0.97
FOXN3-209ENST00000555353 POLMQ9NP87 494 aaPredicted RBP21.12■□□□□ 0.97
FOXN3-209ENST00000555353 OSGEPQ9NPF4 335 aa21.12■□□□□ 0.97
FOXN3-209ENST00000555353 CACNA2D2Q9NY47 1150 aa21.12■□□□□ 0.97
FOXN3-209ENST00000555353 THAP10Q9P2Z0 257 aaPredicted RBP21.12■□□□□ 0.97
FOXN3-209ENST00000555353 PLA2G4CQ9UP65 541 aa21.12■□□□□ 0.97
FOXN3-209ENST00000555353 PCDHGA2Q9Y5H1 932 aa21.12■□□□□ 0.97
FOXN3-209ENST00000555353 AIF1P55008 147 aa21.11■□□□□ 0.97
FOXN3-209ENST00000555353 SCAPQ12770 1279 aa21.11■□□□□ 0.97
FOXN3-209ENST00000555353 FUT11Q495W5 492 aa21.11■□□□□ 0.97
FOXN3-209ENST00000555353 ZNF683Q8IZ20 524 aa21.11■□□□□ 0.97
FOXN3-209ENST00000555353 C17orf53Q8N3J3 647 aaPredicted RBP21.11■□□□□ 0.97
FOXN3-209ENST00000555353 NELL1Q92832 810 aa21.11■□□□□ 0.97
FOXN3-209ENST00000555353 LMLNQ96KR4 655 aa21.11■□□□□ 0.97
FOXN3-209ENST00000555353 OSBPL2Q9H1P3 480 aa21.11■□□□□ 0.97
FOXN3-209ENST00000555353 IP6K2Q9UHH9 426 aa21.11■□□□□ 0.97
FOXN3-209ENST00000555353 IGLV3-10A0A075B6K4 115 aa21.1■□□□□ 0.97
FOXN3-209ENST00000555353 DRGXA6NNA5 263 aa21.1■□□□□ 0.97
FOXN3-209ENST00000555353 ALDH1A2O94788 518 aa21.1■□□□□ 0.97
FOXN3-209ENST00000555353 PXNP49023 591 aaPredicted RBP21.1■□□□□ 0.97
FOXN3-209ENST00000555353 FNTBP49356 437 aa21.1■□□□□ 0.97
FOXN3-209ENST00000555353 ZNF252P-AS1Q0IIN9 211 aa21.1■□□□□ 0.97
FOXN3-209ENST00000555353 SLC12A1Q13621 1099 aa21.1■□□□□ 0.97
FOXN3-209ENST00000555353 ZNF234Q14588 700 aa21.1■□□□□ 0.97
FOXN3-209ENST00000555353 TMEM92Q6UXU6 159 aa21.1■□□□□ 0.97
FOXN3-209ENST00000555353 LONP2Q86WA8 852 aa21.1■□□□□ 0.97
FOXN3-209ENST00000555353 SYCE1Q8N0S2 351 aa21.1■□□□□ 0.97
FOXN3-209ENST00000555353 ZBTB44Q8NCP5 570 aa21.1■□□□□ 0.97
FOXN3-209ENST00000555353 CYB5D2Q8WUJ1 264 aa21.1■□□□□ 0.97
FOXN3-209ENST00000555353 GABRG3Q99928 467 aa21.1■□□□□ 0.97
FOXN3-209ENST00000555353 NCAPGQ9BPX3 1015 aa21.1■□□□□ 0.97
FOXN3-209ENST00000555353 ZYG11BQ9C0D3 744 aa21.1■□□□□ 0.97
FOXN3-209ENST00000555353 MPP6Q9NZW5 540 aa21.1■□□□□ 0.97
FOXN3-209ENST00000555353 STON1Q9Y6Q2 735 aa21.1■□□□□ 0.97
FOXN3-209ENST00000555353 R4GN57 208 aa21.1■□□□□ 0.97
FOXN3-209ENST00000555353 VPS13AQ96RL7 3174 aa21.1■□□□□ 0.97
FOXN3-209ENST00000555353 CNTN5O94779 1100 aa21.1■□□□□ 0.97
FOXN3-209ENST00000555353 DLDP09622 509 aaKnown RBP21.1■□□□□ 0.97
FOXN3-209ENST00000555353 HOXC13P31276 330 aa21.1■□□□□ 0.97
FOXN3-209ENST00000555353 CSKP41240 450 aa21.1■□□□□ 0.97
FOXN3-209ENST00000555353 NRG1Q02297 640 aaPredicted RBP21.1■□□□□ 0.97
FOXN3-209ENST00000555353 DMWDQ09019 674 aa21.1■□□□□ 0.97
FOXN3-209ENST00000555353 PLEKHG6Q3KR16 790 aa21.1■□□□□ 0.97
FOXN3-209ENST00000555353 FNDC3BQ53EP0 1204 aaKnown RBP21.1■□□□□ 0.97
FOXN3-209ENST00000555353 ALFQ53S48 1182 aa21.1■□□□□ 0.97
FOXN3-209ENST00000555353 PITRM1Q5JRX3 1037 aa21.1■□□□□ 0.97
FOXN3-209ENST00000555353 CXorf57Q6NSI4 855 aaKnown RBP21.1■□□□□ 0.97
FOXN3-209ENST00000555353 SERPINA13PQ6UXR4 307 aa21.1■□□□□ 0.97
FOXN3-209ENST00000555353 TFAP2DQ7Z6R9 452 aa21.1■□□□□ 0.97
FOXN3-209ENST00000555353 TRIM58Q8NG06 486 aa21.1■□□□□ 0.97
FOXN3-209ENST00000555353 TPCN2Q8NHX9 752 aa21.1■□□□□ 0.97
FOXN3-209ENST00000555353 SALL4Q9UJQ4 1053 aa21.1■□□□□ 0.97
FOXN3-209ENST00000555353 INTS6Q9UL03 887 aaKnown RBP21.1■□□□□ 0.97
FOXN3-209ENST00000555353 CCDC163A0A0D9SF12 145 aa21.09■□□□□ 0.97
FOXN3-209ENST00000555353 WASH3PC4AMC7 463 aa21.09■□□□□ 0.97
FOXN3-209ENST00000555353 ZBTB24O43167 697 aaPredicted RBP21.09■□□□□ 0.97
FOXN3-209ENST00000555353 NBL1P41271 181 aa21.09■□□□□ 0.97
FOXN3-209ENST00000555353 IL12RB1P42701 662 aa21.09■□□□□ 0.97
FOXN3-209ENST00000555353 PIGHQ14442 188 aaPredicted RBP21.09■□□□□ 0.97
FOXN3-209ENST00000555353 STARD3Q14849 445 aa21.09■□□□□ 0.97
FOXN3-209ENST00000555353 ACAP1Q15027 740 aa21.09■□□□□ 0.97
FOXN3-209ENST00000555353 ANO7Q6IWH7 933 aa21.09■□□□□ 0.97
FOXN3-209ENST00000555353 RWDD4Q6NW29 188 aaKnown RBP21.09■□□□□ 0.97
FOXN3-209ENST00000555353 TTC17Q96AE7 1141 aa21.09■□□□□ 0.97
FOXN3-209ENST00000555353 BCCIPQ9P287 314 aaKnown RBP eCLIP21.09■□□□□ 0.978e-8■■■■■ 34.1
FOXN3-209ENST00000555353 PPARGC1AQ9UBK2 798 aaKnown RBP21.09■□□□□ 0.97
FOXN3-209ENST00000555353 EBF1Q9UH73 591 aa21.09■□□□□ 0.97
FOXN3-209ENST00000555353 FZD10Q9ULW2 581 aa21.09■□□□□ 0.97
FOXN3-209ENST00000555353 TBC1D30Q9Y2I9 924 aa21.09■□□□□ 0.97
FOXN3-209ENST00000555353 TCRBV21S2A2A0A5A6 115 aa21.08■□□□□ 0.97
FOXN3-209ENST00000555353 ESPNB1AK53 854 aa21.08■□□□□ 0.97
FOXN3-209ENST00000555353 PRPSAP2O60256 369 aa21.08■□□□□ 0.97
FOXN3-209ENST00000555353 ASLP04424 464 aa21.08■□□□□ 0.97
FOXN3-209ENST00000555353 OR1E1P30953 314 aa21.08■□□□□ 0.97
FOXN3-209ENST00000555353 MESDQ14696 234 aa21.08■□□□□ 0.97
FOXN3-209ENST00000555353 DAAM2Q86T65 1068 aa21.08■□□□□ 0.97
FOXN3-209ENST00000555353 SETD3Q86TU7 594 aaPredicted RBP21.08■□□□□ 0.97
FOXN3-209ENST00000555353 WDR5BQ86VZ2 330 aa21.08■□□□□ 0.97
FOXN3-209ENST00000555353 MUC3BQ9H195 1237 aa21.08■□□□□ 0.97
FOXN3-209ENST00000555353 PCSK1NQ9UHG2 260 aa21.08■□□□□ 0.97
FOXN3-209ENST00000555353 RAD54BQ9Y620 910 aa21.08■□□□□ 0.97
FOXN3-209ENST00000555353 AXIN1O15169 862 aa21.07■□□□□ 0.96
FOXN3-209ENST00000555353 SYNCRIPO60506 623 aaKnown RBP21.07■□□□□ 0.96
FOXN3-209ENST00000555353 LRIG2O94898 1065 aa21.07■□□□□ 0.96
FOXN3-209ENST00000555353 RHOCP08134 193 aa21.07■□□□□ 0.96
FOXN3-209ENST00000555353 MZF1P28698 734 aaPredicted RBP21.07■□□□□ 0.96
FOXN3-209ENST00000555353 MIPP30301 263 aa21.07■□□□□ 0.96
FOXN3-209ENST00000555353 L1CAMP32004 1257 aa21.07■□□□□ 0.96
FOXN3-209ENST00000555353 ST8SIA6P61647 398 aa21.07■□□□□ 0.96
FOXN3-209ENST00000555353 ENPP2Q13822 863 aa21.07■□□□□ 0.96
FOXN3-209ENST00000555353 C6orf118Q5T5N4 469 aa21.07■□□□□ 0.96
FOXN3-209ENST00000555353 MANEALQ5VSG8 457 aa21.07■□□□□ 0.96
FOXN3-209ENST00000555353 RNF219Q5W0B1 726 aaPredicted RBP21.07■□□□□ 0.96
FOXN3-209ENST00000555353 C11orf63Q6NUN7 778 aa21.07■□□□□ 0.96
FOXN3-209ENST00000555353 APCDD1Q8J025 514 aa21.07■□□□□ 0.96
FOXN3-209ENST00000555353 ARFGAP1Q8N6T3 406 aa21.07■□□□□ 0.96
FOXN3-209ENST00000555353 UBE2Q2Q8WVN8 375 aa21.07■□□□□ 0.96
FOXN3-209ENST00000555353 HMGB4Q8WW32 186 aa21.07■□□□□ 0.96
FOXN3-209ENST00000555353 TBC1D31Q96DN5 1066 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms