RNA–Protein interactions for RNA: ENST00000555075.5

ACTN1-214, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 828 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-214ENST00000555075 H0Y858 1186 aa12.38□□□□□ -0.43
ACTN1-214ENST00000555075 GFRA2O00451 464 aa12.38□□□□□ -0.43
ACTN1-214ENST00000555075 BUB1O43683 1085 aa12.38□□□□□ -0.43
ACTN1-214ENST00000555075 KRT86O43790 486 aa12.38□□□□□ -0.43
ACTN1-214ENST00000555075 EPHX1P07099 455 aa12.38□□□□□ -0.43
ACTN1-214ENST00000555075 DLDP09622 509 aaKnown RBP12.38□□□□□ -0.43
ACTN1-214ENST00000555075 CCDC175P0C221 793 aa12.38□□□□□ -0.43
ACTN1-214ENST00000555075 RARAP10276 462 aa12.38□□□□□ -0.43
ACTN1-214ENST00000555075 CETN2P41208 172 aa12.38□□□□□ -0.43
ACTN1-214ENST00000555075 ECT2LQ008S8 904 aa12.38□□□□□ -0.43
ACTN1-214ENST00000555075 ZNF252P-AS1Q0IIN9 211 aa12.38□□□□□ -0.43
ACTN1-214ENST00000555075 POLD3Q15054 466 aaPredicted RBP12.38□□□□□ -0.43
ACTN1-214ENST00000555075 ANGPT1Q15389 498 aa12.38□□□□□ -0.43
ACTN1-214ENST00000555075 PLEKHG6Q3KR16 790 aa12.38□□□□□ -0.43
ACTN1-214ENST00000555075 DAB2IPQ5VWQ8 1189 aa12.38□□□□□ -0.43
ACTN1-214ENST00000555075 HEATR6Q6AI08 1181 aaKnown RBP12.38□□□□□ -0.43
ACTN1-214ENST00000555075 RETSATQ6NUM9 610 aa12.38□□□□□ -0.43
ACTN1-214ENST00000555075 ZNF783Q6ZMS7 281 aa12.38□□□□□ -0.43
ACTN1-214ENST00000555075 SYT13Q7L8C5 426 aa12.38□□□□□ -0.43
ACTN1-214ENST00000555075 RHOT1Q8IXI2 618 aa12.38□□□□□ -0.43
ACTN1-214ENST00000555075 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.38□□□□□ -0.43
ACTN1-214ENST00000555075 WFDC5Q8TCV5 224 aa12.38□□□□□ -0.43
ACTN1-214ENST00000555075 CYB5D2Q8WUJ1 264 aa12.38□□□□□ -0.43
ACTN1-214ENST00000555075 TEKT4Q8WW24 435 aa12.38□□□□□ -0.43
ACTN1-214ENST00000555075 ATRIPQ8WXE1 791 aa12.38□□□□□ -0.43
ACTN1-214ENST00000555075 ATOH1Q92858 354 aaPredicted RBP12.38□□□□□ -0.43
ACTN1-214ENST00000555075 ZDHHC4Q9NPG8 344 aa12.38□□□□□ -0.43
ACTN1-214ENST00000555075 CACNA2D2Q9NY47 1150 aa12.38□□□□□ -0.43
ACTN1-214ENST00000555075 SUN2Q9UH99 717 aa12.38□□□□□ -0.43
ACTN1-214ENST00000555075 MMP17Q9ULZ9 603 aa12.38□□□□□ -0.43
ACTN1-214ENST00000555075 STARD13Q9Y3M8 1113 aa12.38□□□□□ -0.43
ACTN1-214ENST00000555075 FARP1Q9Y4F1 1045 aaPredicted RBP12.38□□□□□ -0.43
ACTN1-214ENST00000555075 STON1Q9Y6Q2 735 aa12.38□□□□□ -0.43
ACTN1-214ENST00000555075 COL4A2P08572 1712 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 IGLV3-10A0A075B6K4 115 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 TCRBV21S2A2A0A5A6 115 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 ILVBLA1L0T0 632 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 MACROD2A1Z1Q3 448 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 LRRD1A4D1F6 860 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 SHISA7A6NL88 538 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 FAM72CH0Y354 149 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 CBX4O00257 560 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 RNASEH1O60930 286 aaKnown RBP12.37□□□□□ -0.43
ACTN1-214ENST00000555075 MTA2O94776 668 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 APBB3O95704 486 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 KRT1P04264 644 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 SRPRAP08240 638 aaKnown RBP12.37□□□□□ -0.43
ACTN1-214ENST00000555075 RECQLP46063 649 aaPredicted RBP12.37□□□□□ -0.43
ACTN1-214ENST00000555075 NUMBP49757 651 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 IRAK1P51617 712 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 GEMIN4P57678 1058 aaKnown RBP12.37□□□□□ -0.43
ACTN1-214ENST00000555075 SATB1Q01826 763 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 GNA12Q03113 381 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 MESP2Q0VG99 397 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 FZD5Q13467 585 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 ZNF234Q14588 700 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 PDK2Q15119 407 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 FUT11Q495W5 492 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 C5orf22Q49AR2 442 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 FSCBQ5H9T9 825 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 FAM72AQ5TYM5 149 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 FAM72DQ6L9T8 149 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 ZC3H14Q6PJT7 736 aaKnown RBP12.37□□□□□ -0.43
ACTN1-214ENST00000555075 TMCO3Q6UWJ1 677 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 RFX8Q6ZV50 586 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 FAM72BQ86X60 149 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 SFTPA1Q8IWL2 248 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 APCDD1Q8J025 514 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 SYCE1Q8N0S2 351 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 PHTF2Q8N3S3 785 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 CAMKK1Q8N5S9 505 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 RTL3Q8N8U3 475 aaKnown RBP12.37□□□□□ -0.43
ACTN1-214ENST00000555075 IL17RCQ8NAC3 791 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 HMGB4Q8WW32 186 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 SORCS1Q8WY21 1168 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 ERLEC1Q96DZ1 483 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 CCDC114Q96M63 670 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 HHIPQ96QV1 700 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 PEBP4Q96S96 227 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 KCTD15Q96SI1 283 aaPredicted RBP12.37□□□□□ -0.43
ACTN1-214ENST00000555075 TMEM248Q9NWD8 314 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 DDX56Q9NY93 547 aaKnown RBP12.37□□□□□ -0.43
ACTN1-214ENST00000555075 DLGAP2Q9P1A6 1054 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 THAP10Q9P2Z0 257 aaPredicted RBP12.37□□□□□ -0.43
ACTN1-214ENST00000555075 FBXO4Q9UKT5 387 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 ERVW-1Q9UQF0 538 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 TBC1D30Q9Y2I9 924 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 COL4A3Q01955 1670 aa12.37□□□□□ -0.43
ACTN1-214ENST00000555075 ARHGAP42A6NI28 874 aa12.36□□□□□ -0.43
ACTN1-214ENST00000555075 I6L893 689 aaPredicted RBP12.36□□□□□ -0.43
ACTN1-214ENST00000555075 SGK1O00141 431 aa12.36□□□□□ -0.43
ACTN1-214ENST00000555075 DFFAO00273 331 aa12.36□□□□□ -0.43
ACTN1-214ENST00000555075 BNIP3LO60238 219 aa12.36□□□□□ -0.43
ACTN1-214ENST00000555075 NEBLO76041 1014 aa12.36□□□□□ -0.43
ACTN1-214ENST00000555075 ACADMP11310 421 aa12.36□□□□□ -0.43
ACTN1-214ENST00000555075 HNRNPLP14866 589 aaKnown RBP eCLIP12.36□□□□□ -0.43
ACTN1-214ENST00000555075 GOT1P17174 413 aa12.36□□□□□ -0.43
ACTN1-214ENST00000555075 COMTP21964 271 aa12.36□□□□□ -0.43
ACTN1-214ENST00000555075 MZF1P28698 734 aaPredicted RBP12.36□□□□□ -0.43
ACTN1-214ENST00000555075 SERPINB6P35237 376 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms