RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 KCTD21Q4G0X4 260 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 PPP1R16AQ96I34 528 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 ABCG8Q9H221 673 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 REEP1Q9H902 201 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 STAP2Q9UGK3 403 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 TIMM13Q9Y5L4 95 aaPredicted RBP7□□□□□ -1.29
SYNE2-216ENST00000555002 TRAV19A0A0A6YYK7 116 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 MED26O95402 600 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 ACAT1P24752 427 aaKnown RBP7□□□□□ -1.29
SYNE2-216ENST00000555002 ZCWPW2Q504Y3 356 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 ZNF318Q5VUA4 2279 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 SRBD1Q8N5C6 995 aaKnown RBP7□□□□□ -1.29
SYNE2-216ENST00000555002 ANKFN1Q8N957 763 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 FATE1Q969F0 183 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 ATG4CQ96DT6 458 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 SGSM3Q96HU1 749 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 BPIFA3Q9BQP9 254 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 PCDH12Q9NPG4 1184 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 RASSF1Q9NS23 344 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 XPR1Q9UBH6 696 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 ENOPH1Q9UHY7 261 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 ARHGEF12Q9NZN5 1544 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 CCDC182A6NF36 153 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 GLRA3O75311 464 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 S100A3P33764 101 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 BUD31P41223 144 aaPredicted RBP7□□□□□ -1.29
SYNE2-216ENST00000555002 TRAF3Q13114 568 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 BMPR2Q13873 1038 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 TOB2Q14106 344 aaPredicted RBP7□□□□□ -1.29
SYNE2-216ENST00000555002 CHST13Q8NET6 341 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 RORBQ92753 470 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 OSMRQ99650 979 aa7□□□□□ -1.29
SYNE2-216ENST00000555002 ARL5CA6NH57 179 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 KMOO15229 486 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 TMCC2O75069 709 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 DNASE1L1P49184 302 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 RGS1Q08116 209 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 ATP13A4Q4VNC1 1196 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 DGLUCYQ7Z3D6 616 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 GALNT7Q86SF2 657 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 KYQ8NBH2 561 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 OR10H5Q8NGA6 315 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 FAM81AQ8TBF8 368 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 TSEN15Q8WW01 171 aaKnown RBP6.99□□□□□ -1.29
SYNE2-216ENST00000555002 TESCQ96BS2 214 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 MNTQ99583 582 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 MLPHQ9BV36 600 aaPredicted RBP6.99□□□□□ -1.29
SYNE2-216ENST00000555002 VPS45Q9NRW7 570 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 STOML2Q9UJZ1 356 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 SLC12A4Q9UP95 1085 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 FAM205CA6NFA0 338 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 S100A1P23297 94 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 LTKP29376 864 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 CTNNB1P35222 781 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 TAS2R41P59536 307 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 ITGA9Q13797 1035 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 SLC39A12Q504Y0 691 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 ISLR2Q6UXK2 745 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 MILR1Q7Z6M3 343 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 SYT12Q8IV01 421 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 REXO1L1PQ8IX06 675 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 ZNF248Q8NDW4 579 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 HIC2Q96JB3 615 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 RNF145Q96MT1 663 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 ARMCX1Q9P291 453 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 ADGRG1Q9Y653 693 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 ATP10BO94823 1461 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 MYH8P13535 1937 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 ZNF432O94892 652 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 CCNYL3P0C7X3 344 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 UCHL3P15374 230 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 EIF4BP23588 611 aaKnown RBP6.99□□□□□ -1.29
SYNE2-216ENST00000555002 ABRQ12979 859 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 N4BP2L1Q5TBK1 243 aaPredicted RBP6.99□□□□□ -1.29
SYNE2-216ENST00000555002 CYP2R1Q6VVX0 501 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 DEFB107AQ8IZN7 70 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 RUSC1Q9BVN2 902 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 ATG10Q9H0Y0 220 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 FCHO1O14526 889 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 NCK1P16333 377 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 RPS6KA3P51812 740 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 AGBL2Q5U5Z8 902 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 PDPK2PQ6A1A2 396 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 NRSN1Q8IZ57 195 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 SVOPQ8N4V2 548 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 CRELD1Q96HD1 420 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 TUT1Q9H6E5 874 aaKnown RBP6.99□□□□□ -1.29
SYNE2-216ENST00000555002 CKLFQ9UBR5 152 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 TAGLN3Q9UI15 199 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 PCDHB2Q9Y5E7 798 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 ANKDD1BA6NHY2 528 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 RBAK-RBAKDNI3L0D1 243 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 MATN4O95460 622 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 SLC25A27O95847 323 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 CCR1P32246 355 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 TKTL1P51854 596 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 PARP8Q8N3A8 854 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 ZNF563Q8TA94 476 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 ITFG1Q8TB96 612 aa6.99□□□□□ -1.29
SYNE2-216ENST00000555002 MAGEE2Q8TD90 523 aaPredicted RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms