RNA–Protein interactions for RNA: ENST00000554768.5

MTHFD1-209, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-209ENST00000554768 HMGB4Q8WW32 186 aa13.28□□□□□ -0.28
MTHFD1-209ENST00000554768 GAB3Q8WWW8 586 aa13.28□□□□□ -0.28
MTHFD1-209ENST00000554768 ERLEC1Q96DZ1 483 aa13.28□□□□□ -0.28
MTHFD1-209ENST00000554768 PPP1R9BQ96SB3 815 aa13.28□□□□□ -0.28
MTHFD1-209ENST00000554768 PACSIN1Q9BY11 444 aa13.28□□□□□ -0.28
MTHFD1-209ENST00000554768 DEF6Q9H4E7 631 aa13.28□□□□□ -0.28
MTHFD1-209ENST00000554768 RETREG1Q9H6L5 497 aa13.28□□□□□ -0.28
MTHFD1-209ENST00000554768 SLCO3A1Q9UIG8 710 aa13.28□□□□□ -0.28
MTHFD1-209ENST00000554768 NEU3Q9UQ49 428 aa13.28□□□□□ -0.28
MTHFD1-209ENST00000554768 ERVW-1Q9UQF0 538 aa13.28□□□□□ -0.28
MTHFD1-209ENST00000554768 EP300Q09472 2414 aaPredicted RBP13.28□□□□□ -0.28
MTHFD1-209ENST00000554768 PRR23AA6NEV1 266 aa13.27□□□□□ -0.29
MTHFD1-209ENST00000554768 SYNCRIPO60506 623 aaKnown RBP13.27□□□□□ -0.29
MTHFD1-209ENST00000554768 LRCH4O75427 683 aa13.27□□□□□ -0.29
MTHFD1-209ENST00000554768 RPP40O75818 363 aaKnown RBP13.27□□□□□ -0.29
MTHFD1-209ENST00000554768 RNF8O76064 485 aa13.27□□□□□ -0.29
MTHFD1-209ENST00000554768 EPHX1P07099 455 aa13.27□□□□□ -0.29
MTHFD1-209ENST00000554768 SRPRAP08240 638 aaKnown RBP13.27□□□□□ -0.29
MTHFD1-209ENST00000554768 HLA-EP13747 358 aa13.27□□□□□ -0.29
MTHFD1-209ENST00000554768 RHOQP17081 205 aa13.27□□□□□ -0.29
MTHFD1-209ENST00000554768 DESP17661 470 aa13.27□□□□□ -0.29
MTHFD1-209ENST00000554768 MIPP30301 263 aa13.27□□□□□ -0.29
MTHFD1-209ENST00000554768 OR1E1P30953 314 aa13.27□□□□□ -0.29
MTHFD1-209ENST00000554768 SULT2A1Q06520 285 aa13.27□□□□□ -0.29
MTHFD1-209ENST00000554768 SEMA3BQ13214 749 aa13.27□□□□□ -0.29
MTHFD1-209ENST00000554768 CAMK2GQ13555 558 aaPredicted RBP13.27□□□□□ -0.29
MTHFD1-209ENST00000554768 SIM2Q14190 667 aaPredicted RBP13.27□□□□□ -0.29
MTHFD1-209ENST00000554768 STARD3Q14849 445 aa13.27□□□□□ -0.29
MTHFD1-209ENST00000554768 ACAP1Q15027 740 aa13.27□□□□□ -0.29
MTHFD1-209ENST00000554768 FNDC3BQ53EP0 1204 aaKnown RBP13.27□□□□□ -0.29
MTHFD1-209ENST00000554768 USP39Q53GS9 565 aaKnown RBP13.27□□□□□ -0.29
MTHFD1-209ENST00000554768 EFHC2Q5JST6 749 aa13.27□□□□□ -0.29
MTHFD1-209ENST00000554768 C6orf118Q5T5N4 469 aa13.27□□□□□ -0.29
MTHFD1-209ENST00000554768 CYP4V2Q6ZWL3 525 aaPredicted RBP13.27□□□□□ -0.29
MTHFD1-209ENST00000554768 TFAP2DQ7Z6R9 452 aa13.27□□□□□ -0.29
MTHFD1-209ENST00000554768 NLRP14Q86W24 1093 aa13.27□□□□□ -0.29
MTHFD1-209ENST00000554768 MRGPRX1Q96LB2 322 aa13.27□□□□□ -0.29
MTHFD1-209ENST00000554768 PEBP4Q96S96 227 aa13.27□□□□□ -0.29
MTHFD1-209ENST00000554768 NUP85Q9BW27 656 aa13.27□□□□□ -0.29
MTHFD1-209ENST00000554768 TPSD1Q9BZJ3 242 aa13.27□□□□□ -0.29
MTHFD1-209ENST00000554768 MKRN2Q9H000 416 aaKnown RBP13.27□□□□□ -0.29
MTHFD1-209ENST00000554768 SPTLC3Q9NUV7 552 aa13.27□□□□□ -0.29
MTHFD1-209ENST00000554768 BCCIPQ9P287 314 aaKnown RBP eCLIP13.27□□□□□ -0.29
MTHFD1-209ENST00000554768 PCSK1NQ9UHG2 260 aa13.27□□□□□ -0.29
MTHFD1-209ENST00000554768 A0A0D9SEW6 157 aa13.26□□□□□ -0.29
MTHFD1-209ENST00000554768 ILVBLA1L0T0 632 aa13.26□□□□□ -0.29
MTHFD1-209ENST00000554768 DCLK1O15075 740 aa13.26□□□□□ -0.29
MTHFD1-209ENST00000554768 RHOCP08134 193 aa13.26□□□□□ -0.29
MTHFD1-209ENST00000554768 H2AFZP0C0S5 128 aa13.26□□□□□ -0.29
MTHFD1-209ENST00000554768 C7P10643 843 aa13.26□□□□□ -0.29
MTHFD1-209ENST00000554768 NDUFV2P19404 249 aa13.26□□□□□ -0.29
MTHFD1-209ENST00000554768 PCK1P35558 622 aa13.26□□□□□ -0.29
MTHFD1-209ENST00000554768 NUMBP49757 651 aa13.26□□□□□ -0.29
MTHFD1-209ENST00000554768 MRE11P49959 708 aa13.26□□□□□ -0.29
MTHFD1-209ENST00000554768 VASPP50552 380 aaPredicted RBP13.26□□□□□ -0.29
MTHFD1-209ENST00000554768 COPAP53621 1224 aa13.26□□□□□ -0.29
MTHFD1-209ENST00000554768 ST8SIA6P61647 398 aa13.26□□□□□ -0.29
MTHFD1-209ENST00000554768 PIGHQ14442 188 aaPredicted RBP13.26□□□□□ -0.29
MTHFD1-209ENST00000554768 MAP7D1Q3KQU3 841 aa13.26□□□□□ -0.29
MTHFD1-209ENST00000554768 ERMARDQ5T6L9 678 aa13.26□□□□□ -0.29
MTHFD1-209ENST00000554768 RWDD4Q6NW29 188 aaKnown RBP13.26□□□□□ -0.29
MTHFD1-209ENST00000554768 H2AFVQ71UI9 128 aa13.26□□□□□ -0.29
MTHFD1-209ENST00000554768 GVINP1Q7Z2Y8 2422 aa13.26□□□□□ -0.29
MTHFD1-209ENST00000554768 PGBD3Q8N328 593 aa13.26□□□□□ -0.29
MTHFD1-209ENST00000554768 ZNF366Q8N895 744 aa13.26□□□□□ -0.29
MTHFD1-209ENST00000554768 NIPA2Q8N8Q9 360 aa13.26□□□□□ -0.29
MTHFD1-209ENST00000554768 CTNNBL1Q8WYA6 563 aaPredicted RBP13.26□□□□□ -0.29
MTHFD1-209ENST00000554768 TBC1D31Q96DN5 1066 aa13.26□□□□□ -0.29
MTHFD1-209ENST00000554768 BTBD6Q96KE9 485 aa13.26□□□□□ -0.29
MTHFD1-209ENST00000554768 RPL10LQ96L21 214 aaKnown RBP13.26□□□□□ -0.29
MTHFD1-209ENST00000554768 PANX2Q96RD6 677 aa13.26□□□□□ -0.29
MTHFD1-209ENST00000554768 NCAPGQ9BPX3 1015 aa13.26□□□□□ -0.29
MTHFD1-209ENST00000554768 MUC3BQ9H195 1237 aa13.26□□□□□ -0.29
MTHFD1-209ENST00000554768 SLC6A17Q9H1V8 727 aa13.26□□□□□ -0.29
MTHFD1-209ENST00000554768 MTG2Q9H4K7 406 aa13.26□□□□□ -0.29
MTHFD1-209ENST00000554768 PRSS16Q9NQE7 514 aa13.26□□□□□ -0.29
MTHFD1-209ENST00000554768 NDFIP2Q9NV92 336 aa13.26□□□□□ -0.29
MTHFD1-209ENST00000554768 TMEM248Q9NWD8 314 aa13.26□□□□□ -0.29
MTHFD1-209ENST00000554768 SUN2Q9UH99 717 aa13.26□□□□□ -0.29
MTHFD1-209ENST00000554768 VPS28Q9UK41 221 aa13.26□□□□□ -0.29
MTHFD1-209ENST00000554768 INVSQ9Y283 1065 aa13.26□□□□□ -0.29
MTHFD1-209ENST00000554768 TTC34A8MYJ7 566 aa13.25□□□□□ -0.29
MTHFD1-209ENST00000554768 MYO1FO00160 1098 aa13.25□□□□□ -0.29
MTHFD1-209ENST00000554768 ZBTB24O43167 697 aaPredicted RBP13.25□□□□□ -0.29
MTHFD1-209ENST00000554768 PRPSAP2O60256 369 aa13.25□□□□□ -0.29
MTHFD1-209ENST00000554768 TMEM253P0C7T8 217 aa13.25□□□□□ -0.29
MTHFD1-209ENST00000554768 TCF4P15884 667 aa13.25□□□□□ -0.29
MTHFD1-209ENST00000554768 P2RY2P41231 377 aa13.25□□□□□ -0.29
MTHFD1-209ENST00000554768 STK19P49842 368 aaPredicted RBP13.25□□□□□ -0.29
MTHFD1-209ENST00000554768 CA9Q16790 459 aa13.25□□□□□ -0.29
MTHFD1-209ENST00000554768 HNRNPA1L2Q32P51 320 aaKnown RBP13.25□□□□□ -0.29
MTHFD1-209ENST00000554768 DAB2IPQ5VWQ8 1189 aa13.25□□□□□ -0.29
MTHFD1-209ENST00000554768 ZNF783Q6ZMS7 281 aa13.25□□□□□ -0.29
MTHFD1-209ENST00000554768 CEP68Q76N32 757 aa13.25□□□□□ -0.29
MTHFD1-209ENST00000554768 METTL3Q86U44 580 aaKnown RBP13.25□□□□□ -0.29
MTHFD1-209ENST00000554768 ALYREFQ86V81 257 aaKnown RBP13.25□□□□□ -0.29
MTHFD1-209ENST00000554768 TMPRSS6Q8IU80 811 aa13.25□□□□□ -0.29
MTHFD1-209ENST00000554768 PSTKQ8IV42 348 aaKnown RBP13.25□□□□□ -0.29
MTHFD1-209ENST00000554768 FRMD1Q8N878 549 aa13.25□□□□□ -0.29
MTHFD1-209ENST00000554768 RLN3Q8WXF3 142 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms