RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 TDRD12Q587J7 1177 aaKnown RBP10.98□□□□□ -0.65
SHMT2-213ENST00000554600 ACAD10Q6JQN1 1059 aa10.98□□□□□ -0.65
SHMT2-213ENST00000554600 DCUN1D2Q6PH85 259 aa10.98□□□□□ -0.65
SHMT2-213ENST00000554600 MON1BQ7L1V2 547 aa10.98□□□□□ -0.65
SHMT2-213ENST00000554600 IRF2BP2Q7Z5L9 587 aa10.98□□□□□ -0.65
SHMT2-213ENST00000554600 NETO1Q8TDF5 533 aa10.98□□□□□ -0.65
SHMT2-213ENST00000554600 GANCQ8TET4 914 aa10.98□□□□□ -0.65
SHMT2-213ENST00000554600 BAP1Q92560 729 aa10.98□□□□□ -0.65
SHMT2-213ENST00000554600 NT5C3BQ969T7 300 aa10.98□□□□□ -0.65
SHMT2-213ENST00000554600 PGAP3Q96FM1 320 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-213ENST00000554600 TOE1Q96GM8 510 aaKnown RBP10.98□□□□□ -0.65
SHMT2-213ENST00000554600 LMLNQ96KR4 655 aa10.98□□□□□ -0.65
SHMT2-213ENST00000554600 RPL10LQ96L21 214 aaKnown RBP10.98□□□□□ -0.65
SHMT2-213ENST00000554600 HSPA12BQ96MM6 686 aa10.98□□□□□ -0.65
SHMT2-213ENST00000554600 GPR174Q9BXC1 333 aa10.98□□□□□ -0.65
SHMT2-213ENST00000554600 TMEM245Q9H330 911 aa10.98□□□□□ -0.65
SHMT2-213ENST00000554600 PRSS16Q9NQE7 514 aa10.98□□□□□ -0.65
SHMT2-213ENST00000554600 ANLNQ9NQW6 1124 aa10.98□□□□□ -0.65
SHMT2-213ENST00000554600 TMEM51Q9NW97 253 aa10.98□□□□□ -0.65
SHMT2-213ENST00000554600 MPP6Q9NZW5 540 aa10.98□□□□□ -0.65
SHMT2-213ENST00000554600 SLC25A13Q9UJS0 675 aa10.98□□□□□ -0.65
SHMT2-213ENST00000554600 VPS28Q9UK41 221 aa10.98□□□□□ -0.65
SHMT2-213ENST00000554600 TRPM6Q9BX84 2022 aa10.97□□□□□ -0.65
SHMT2-213ENST00000554600 TDRD6O60522 2096 aaKnown RBP10.97□□□□□ -0.65
SHMT2-213ENST00000554600 EDDM13A0A1B0GTR0 161 aa10.97□□□□□ -0.65
SHMT2-213ENST00000554600 C2CD4BA6NLJ0 364 aa10.97□□□□□ -0.65
SHMT2-213ENST00000554600 PATE3B3GLJ2 98 aa10.97□□□□□ -0.65
SHMT2-213ENST00000554600 E9PAM4 449 aa10.97□□□□□ -0.65
SHMT2-213ENST00000554600 RNASEH1O60930 286 aaKnown RBP10.97□□□□□ -0.65
SHMT2-213ENST00000554600 SIN3BO75182 1162 aa10.97□□□□□ -0.65
SHMT2-213ENST00000554600 CNTN5O94779 1100 aa10.97□□□□□ -0.65
SHMT2-213ENST00000554600 DNTTP04053 509 aa10.97□□□□□ -0.65
SHMT2-213ENST00000554600 CFIP05156 583 aa10.97□□□□□ -0.65
SHMT2-213ENST00000554600 SRPRAP08240 638 aaKnown RBP10.97□□□□□ -0.65
SHMT2-213ENST00000554600 DESP17661 470 aa10.97□□□□□ -0.65
SHMT2-213ENST00000554600 OXTRP30559 389 aa10.97□□□□□ -0.65
SHMT2-213ENST00000554600 RFC1P35251 1148 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-213ENST00000554600 SULT2A1Q06520 285 aa10.97□□□□□ -0.65
SHMT2-213ENST00000554600 ZNF33AQ06730 810 aa10.97□□□□□ -0.65
SHMT2-213ENST00000554600 C1QBPQ07021 282 aaKnown RBP10.97□□□□□ -0.65
SHMT2-213ENST00000554600 PTP4A2Q12974 167 aa10.97□□□□□ -0.65
SHMT2-213ENST00000554600 HNRNPA1L2Q32P51 320 aaKnown RBP10.97□□□□□ -0.65
SHMT2-213ENST00000554600 CCDC14Q49A88 953 aa10.97□□□□□ -0.65
SHMT2-213ENST00000554600 TTC31Q49AM3 519 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-213ENST00000554600 RAB6CQ53S08 254 aa10.97□□□□□ -0.65
SHMT2-213ENST00000554600 ALFQ53S48 1182 aa10.97□□□□□ -0.65
SHMT2-213ENST00000554600 SPDYCQ5MJ68 293 aa10.97□□□□□ -0.65
SHMT2-213ENST00000554600 PLA2G2CQ5R387 149 aa10.97□□□□□ -0.65
SHMT2-213ENST00000554600 SH3PXD2AQ5TCZ1 1133 aa10.97□□□□□ -0.65
SHMT2-213ENST00000554600 ZNF776Q68DI1 518 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-213ENST00000554600 IL31Q6EBC2 164 aa10.97□□□□□ -0.65
SHMT2-213ENST00000554600 CXorf57Q6NSI4 855 aaKnown RBP10.97□□□□□ -0.65
SHMT2-213ENST00000554600 SCYL2Q6P3W7 929 aa10.97□□□□□ -0.65
SHMT2-213ENST00000554600 WDR59Q6PJI9 974 aa10.97□□□□□ -0.65
SHMT2-213ENST00000554600 ARCQ7LC44 396 aa10.97□□□□□ -0.65
SHMT2-213ENST00000554600 DGLUCYQ7Z3D6 616 aa10.97□□□□□ -0.65
SHMT2-213ENST00000554600 TFAP2DQ7Z6R9 452 aa10.97□□□□□ -0.65
SHMT2-213ENST00000554600 SYT12Q8IV01 421 aa10.97□□□□□ -0.65
SHMT2-213ENST00000554600 C3orf20Q8ND61 904 aa10.97□□□□□ -0.65
SHMT2-213ENST00000554600 FAM172AQ8WUF8 416 aa10.97□□□□□ -0.65
SHMT2-213ENST00000554600 CPLX3Q8WVH0 158 aa10.97□□□□□ -0.65
SHMT2-213ENST00000554600 MCEEQ96PE7 176 aa10.97□□□□□ -0.65
SHMT2-213ENST00000554600 RAB6CQ9H0N0 254 aa10.97□□□□□ -0.65
SHMT2-213ENST00000554600 HAUS4Q9H6D7 363 aa10.97□□□□□ -0.65
SHMT2-213ENST00000554600 FBRSQ9HAH7 460 aa10.97□□□□□ -0.65
SHMT2-213ENST00000554600 ITM2CQ9NQX7 267 aa10.97□□□□□ -0.65
SHMT2-213ENST00000554600 IFNKQ9P0W0 207 aa10.97□□□□□ -0.65
SHMT2-213ENST00000554600 SLCO3A1Q9UIG8 710 aa10.97□□□□□ -0.65
SHMT2-213ENST00000554600 NCOR2Q9Y618 2525 aa10.96□□□□□ -0.65
SHMT2-213ENST00000554600 DCDC2BA2VCK2 349 aa10.96□□□□□ -0.65
SHMT2-213ENST00000554600 SIGLEC16A6NMB1 481 aa10.96□□□□□ -0.65
SHMT2-213ENST00000554600 I6L893 689 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-213ENST00000554600 BNIP3LO60238 219 aa10.96□□□□□ -0.65
SHMT2-213ENST00000554600 TPM3P06753 285 aa10.96□□□□□ -0.65
SHMT2-213ENST00000554600 SKILP12757 684 aa10.96□□□□□ -0.65
SHMT2-213ENST00000554600 RRM1P23921 792 aa10.96□□□□□ -0.65
SHMT2-213ENST00000554600 DPP6P42658 865 aa10.96□□□□□ -0.65
SHMT2-213ENST00000554600 PTPN9P43378 593 aa10.96□□□□□ -0.65
SHMT2-213ENST00000554600 RPS14P62263 151 aaKnown RBP10.96□□□□□ -0.65
SHMT2-213ENST00000554600 TRIM61Q5EBN2 209 aa10.96□□□□□ -0.65
SHMT2-213ENST00000554600 SYCP2LQ5T4T6 812 aa10.96□□□□□ -0.65
SHMT2-213ENST00000554600 ACBD5Q5T8D3 534 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-213ENST00000554600 RWDD4Q6NW29 188 aaKnown RBP10.96□□□□□ -0.65
SHMT2-213ENST00000554600 PPP1R2P3Q6NXS1 205 aa10.96□□□□□ -0.65
SHMT2-213ENST00000554600 METTL3Q86U44 580 aaKnown RBP10.96□□□□□ -0.65
SHMT2-213ENST00000554600 SLC41A1Q8IVJ1 513 aa10.96□□□□□ -0.65
SHMT2-213ENST00000554600 MCOLN2Q8IZK6 566 aa10.96□□□□□ -0.65
SHMT2-213ENST00000554600 SNX19Q92543 992 aa10.96□□□□□ -0.65
SHMT2-213ENST00000554600 FOXJ1Q92949 421 aa10.96□□□□□ -0.65
SHMT2-213ENST00000554600 MYO19Q96H55 970 aa10.96□□□□□ -0.65
SHMT2-213ENST00000554600 MRGPRX3Q96LB0 322 aa10.96□□□□□ -0.65
SHMT2-213ENST00000554600 C1orf74Q96LT6 269 aa10.96□□□□□ -0.65
SHMT2-213ENST00000554600 HAPLN3Q96S86 360 aa10.96□□□□□ -0.65
SHMT2-213ENST00000554600 FEM1AQ9BSK4 669 aa10.96□□□□□ -0.65
SHMT2-213ENST00000554600 SPON2Q9BUD6 331 aa10.96□□□□□ -0.65
SHMT2-213ENST00000554600 EDEM2Q9BV94 578 aa10.96□□□□□ -0.65
SHMT2-213ENST00000554600 NUP58Q9BVL2 599 aa10.96□□□□□ -0.65
SHMT2-213ENST00000554600 NUSAP1Q9BXS6 441 aaKnown RBP10.96□□□□□ -0.65
SHMT2-213ENST00000554600 EDEM3Q9BZQ6 932 aa10.96□□□□□ -0.65
SHMT2-213ENST00000554600 MIR1-1HGQ9H1L0 117 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms