RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 OLFML3Q9NRN5 406 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 CA14Q9ULX7 337 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 WNK2Q9Y3S1 2297 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 ADGRL3Q9HAR2 1447 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 MROH5Q6ZUA9 1318 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 CXCL14O95715 111 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 IRX1P78414 480 aaPredicted RBP3.37□□□□□ -1.87
SYNE2-212ENST00000554584 PRKG2Q13237 762 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 DEFB115Q30KQ5 88 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 RTL3Q8N8U3 475 aaKnown RBP3.37□□□□□ -1.87
SYNE2-212ENST00000554584 LSM14AQ8ND56 463 aaKnown RBP3.37□□□□□ -1.87
SYNE2-212ENST00000554584 HMGB4Q8WW32 186 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 TBX5Q99593 518 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 PDCD1LG2Q9BQ51 273 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 MRPL40Q9NQ50 206 aaKnown RBP3.37□□□□□ -1.87
SYNE2-212ENST00000554584 TMPRSS4Q9NRS4 437 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 TRIM33Q9UPN9 1127 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 FLT4P35916 1363 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 FAM92AA1XBS5 289 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 RIPK2O43353 540 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 NR1D1P20393 614 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 NR1H3Q13133 447 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 SLC9A4Q6AI14 798 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 RPTNQ6XPR3 784 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 CCSER1Q9C0I3 900 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 NHEJ1Q9H9Q4 299 aaPredicted RBP3.37□□□□□ -1.87
SYNE2-212ENST00000554584 VPS4AQ9UN37 437 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 MTMR6Q9Y217 621 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 CAPN14A8MX76 684 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 H0YCG3 227 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 GTPBP1O00178 669 aaKnown RBP3.36□□□□□ -1.87
SYNE2-212ENST00000554584 FOXN3O00409 490 aaPredicted RBP3.36□□□□□ -1.87
SYNE2-212ENST00000554584 CLDN3O15551 220 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 RLN1P04808 185 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 PCCAP05165 728 aaPredicted RBP3.36□□□□□ -1.87
SYNE2-212ENST00000554584 CREB1P16220 341 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 GNB3P16520 340 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 SRYQ05066 204 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 LINGO4Q6UY18 593 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 KBTBD2Q8IY47 623 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 FAM98AQ8NCA5 519 aaKnown RBP3.36□□□□□ -1.87
SYNE2-212ENST00000554584 P2RX5Q93086 422 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 LZTS2Q9BRK4 669 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 PIKFYVEQ9Y2I7 2098 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 MYPNQ86TC9 1320 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 MPPED1O15442 326 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 ATP8B1O43520 1251 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 SDC3O75056 442 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 CCT3P49368 545 aaKnown RBP3.36□□□□□ -1.87
SYNE2-212ENST00000554584 PRR5LQ6MZQ0 368 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 ADAM2Q99965 735 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 CBWD1Q9BRT8 395 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 DSCC1Q9BVC3 393 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 ACTR8Q9H981 624 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 TBC1D24Q9ULP9 559 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 KLHL20Q9Y2M5 609 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 MED12Q93074 2177 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 UNC13AQ9UPW8 1703 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 CFAP99D6REC4 459 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 CNPP09543 421 aaKnown RBP3.36□□□□□ -1.87
SYNE2-212ENST00000554584 H2AFXP16104 143 aaPredicted RBP3.36□□□□□ -1.87
SYNE2-212ENST00000554584 ZNF23P17027 643 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 RPS6KA3P51812 740 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 GEMIN4P57678 1058 aaKnown RBP3.36□□□□□ -1.87
SYNE2-212ENST00000554584 MAXP61244 160 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 DPP10Q8N608 796 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 OR2L5Q8NG80 312 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 CLCC1Q96S66 551 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 ATP13A1Q9HD20 1204 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 POLE3Q9NRF9 147 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 TESQ9UGI8 421 aaKnown RBP3.36□□□□□ -1.87
SYNE2-212ENST00000554584 AMPD1P23109 780 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 CFL1P23528 166 aaKnown RBP3.36□□□□□ -1.87
SYNE2-212ENST00000554584 CDC25CP30307 473 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 GNA15P30679 374 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 CDH8P55286 799 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 SERPINA13PQ6UXR4 307 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 TBC1D16Q8TBP0 767 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 FAM110BQ8TC76 370 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 COQ8BQ96D53 544 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 ZC3HAV1LQ96H79 300 aaKnown RBP3.36□□□□□ -1.87
SYNE2-212ENST00000554584 ELAC1Q9H777 363 aaKnown RBP3.36□□□□□ -1.87
SYNE2-212ENST00000554584 TLE6Q9H808 572 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 ZNF355PQ9NSJ1 428 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 BAZ2AQ9UIF9 1905 aaKnown RBP3.36□□□□□ -1.87
SYNE2-212ENST00000554584 ISPDA4D126 451 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 OMPP47874 163 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 MAGOHP61326 146 aaKnown RBP3.36□□□□□ -1.87
SYNE2-212ENST00000554584 ERVK-9P63128 1117 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 DR1Q01658 176 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 FXNQ16595 210 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 ZNF284Q2VY69 593 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 MPP7Q5T2T1 576 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 GALNT11Q8NCW6 608 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 SPPL2AQ8TCT8 520 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 TATDN2Q93075 761 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 RNPC3Q96LT9 517 aaKnown RBP3.36□□□□□ -1.87
SYNE2-212ENST00000554584 RIPOR3Q96MK2 946 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 FMO2Q99518 471 aa3.36□□□□□ -1.87
SYNE2-212ENST00000554584 IMP3Q9NV31 184 aaKnown RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms