RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 TPD52L1Q16890 204 aaPredicted RBP4.63□□□□□ -1.67
ATXN3-227ENST00000554491 MTHFSDQ2M296 383 aaKnown RBP4.63□□□□□ -1.67
ATXN3-227ENST00000554491 ANO4Q32M45 955 aa4.63□□□□□ -1.67
ATXN3-227ENST00000554491 GRAMD1BQ3KR37 738 aa4.63□□□□□ -1.67
ATXN3-227ENST00000554491 ANKDD1AQ495B1 522 aa4.63□□□□□ -1.67
ATXN3-227ENST00000554491 PPP4R4Q6NUP7 873 aa4.63□□□□□ -1.67
ATXN3-227ENST00000554491 ANGPTL8Q6UXH0 198 aa4.63□□□□□ -1.67
ATXN3-227ENST00000554491 GPRIN1Q7Z2K8 1008 aa4.63□□□□□ -1.67
ATXN3-227ENST00000554491 GDF7Q7Z4P5 450 aa4.63□□□□□ -1.67
ATXN3-227ENST00000554491 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.63□□□□□ -1.67
ATXN3-227ENST00000554491 MRPL10Q7Z7H8 261 aaKnown RBP4.63□□□□□ -1.67
ATXN3-227ENST00000554491 PHLDB2Q86SQ0 1253 aa4.63□□□□□ -1.67
ATXN3-227ENST00000554491 C14orf80Q86SX3 495 aa4.63□□□□□ -1.67
ATXN3-227ENST00000554491 LRRTM3Q86VH5 581 aa4.63□□□□□ -1.67
ATXN3-227ENST00000554491 EXOC3L1Q86VI1 746 aa4.63□□□□□ -1.67
ATXN3-227ENST00000554491 SPATA24Q86W54 205 aa4.63□□□□□ -1.67
ATXN3-227ENST00000554491 ERICH1Q86X53 443 aa4.63□□□□□ -1.67
ATXN3-227ENST00000554491 ZZZ3Q8IYH5 903 aa4.63□□□□□ -1.67
ATXN3-227ENST00000554491 OR8H2Q8N162 312 aa4.63□□□□□ -1.67
ATXN3-227ENST00000554491 CCAR2Q8N163 923 aaKnown RBP4.63□□□□□ -1.67
ATXN3-227ENST00000554491 C17orf53Q8N3J3 647 aaPredicted RBP4.63□□□□□ -1.67
ATXN3-227ENST00000554491 AGBL3Q8NEM8 1001 aa4.63□□□□□ -1.67
ATXN3-227ENST00000554491 U2AF1L4Q8WU68 220 aaKnown RBP4.63□□□□□ -1.67
ATXN3-227ENST00000554491 CASP10Q92851 521 aa4.63□□□□□ -1.67
ATXN3-227ENST00000554491 INTS12Q96CB8 462 aaKnown RBP4.63□□□□□ -1.67
ATXN3-227ENST00000554491 MED30Q96HR3 178 aa4.63□□□□□ -1.67
ATXN3-227ENST00000554491 SPATA17Q96L03 361 aa4.63□□□□□ -1.67
ATXN3-227ENST00000554491 TUBA1CQ9BQE3 449 aa4.63□□□□□ -1.67
ATXN3-227ENST00000554491 MRPL9Q9BYD2 267 aaKnown RBP4.63□□□□□ -1.67
ATXN3-227ENST00000554491 ARHGAP39Q9C0H5 1083 aa4.63□□□□□ -1.67
ATXN3-227ENST00000554491 VPS16Q9H269 839 aa4.63□□□□□ -1.67
ATXN3-227ENST00000554491 MS4A5Q9H3V2 200 aa4.63□□□□□ -1.67
ATXN3-227ENST00000554491 CLSTN2Q9H4D0 955 aa4.63□□□□□ -1.67
ATXN3-227ENST00000554491 DCTPP1Q9H773 170 aa4.63□□□□□ -1.67
ATXN3-227ENST00000554491 C8orf33Q9H7E9 229 aaPredicted RBP4.63□□□□□ -1.67
ATXN3-227ENST00000554491 PSTPIP2Q9H939 334 aa4.63□□□□□ -1.67
ATXN3-227ENST00000554491 ARNT2Q9HBZ2 717 aa4.63□□□□□ -1.67
ATXN3-227ENST00000554491 XAB2Q9HCS7 855 aaKnown RBP4.63□□□□□ -1.67
ATXN3-227ENST00000554491 ARFGAP3Q9NP61 516 aa4.63□□□□□ -1.67
ATXN3-227ENST00000554491 ZCCHC17Q9NP64 241 aaKnown RBP4.63□□□□□ -1.67
ATXN3-227ENST00000554491 MYOZ2Q9NPC6 264 aa4.63□□□□□ -1.67
ATXN3-227ENST00000554491 EMC3Q9P0I2 261 aa4.63□□□□□ -1.67
ATXN3-227ENST00000554491 NDUFA13Q9P0J0 144 aa4.63□□□□□ -1.67
ATXN3-227ENST00000554491 ORC3Q9UBD5 711 aaPredicted RBP4.63□□□□□ -1.67
ATXN3-227ENST00000554491 CRNNQ9UBG3 495 aaPredicted RBP4.63□□□□□ -1.67
ATXN3-227ENST00000554491 HERC5Q9UII4 1024 aaKnown RBP4.63□□□□□ -1.67
ATXN3-227ENST00000554491 RASAL2Q9UJF2 1139 aa4.63□□□□□ -1.67
ATXN3-227ENST00000554491 LAMP5Q9UJQ1 280 aa4.63□□□□□ -1.67
ATXN3-227ENST00000554491 AGO2Q9UKV8 859 aaKnown RBP4.63□□□□□ -1.67
ATXN3-227ENST00000554491 PNMA8BQ9ULN7 279 aaPredicted RBP4.63□□□□□ -1.67
ATXN3-227ENST00000554491 EXOC7Q9UPT5 735 aa4.63□□□□□ -1.67
ATXN3-227ENST00000554491 CFL2Q9Y281 166 aa4.63□□□□□ -1.67
ATXN3-227ENST00000554491 USP16Q9Y5T5 823 aa4.63□□□□□ -1.67
ATXN3-227ENST00000554491 EPN1Q9Y6I3 576 aaPredicted RBP4.63□□□□□ -1.67
ATXN3-227ENST00000554491 FAM205AQ6ZU69 1335 aa4.63□□□□□ -1.67
ATXN3-227ENST00000554491 CEMIPQ8WUJ3 1361 aa4.63□□□□□ -1.67
ATXN3-227ENST00000554491 BDP1A6H8Y1 2624 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 SYNJ2BP-COX16A0A087WUM0 186 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 C17orf113A0A1B0GUU1 675 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 EFCAB8A8MWE9 144 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 KIF28PB7ZC32 967 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 hCG_1984214I3L0E3 225 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 TGM5O43548 720 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 USO1O60763 962 aaKnown RBP4.62□□□□□ -1.67
ATXN3-227ENST00000554491 TMCC2O75069 709 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 LCA5LO95447 670 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 TUBBP07437 444 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 RHOXF2BP0C7M4 288 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 CDK4P11802 303 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 PCNAP12004 261 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 CPA3P15088 417 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 PORP16435 677 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-227ENST00000554491 ZNF37AP17032 561 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-227ENST00000554491 ZNF3P17036 446 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 PTPN2P17706 415 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 IL10P22301 178 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 CD40P25942 277 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 RPL9P32969 192 aaKnown RBP4.62□□□□□ -1.67
ATXN3-227ENST00000554491 CHKAP35790 457 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 ASMTP46597 345 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 PRMT2P55345 433 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 WNT3AP56704 352 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 RNASE9P60153 205 aaKnown RBP4.62□□□□□ -1.67
ATXN3-227ENST00000554491 OLR1P78380 273 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 MRPS15P82914 257 aaKnown RBP4.62□□□□□ -1.67
ATXN3-227ENST00000554491 ROR1Q01973 937 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 PLOD1Q02809 727 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-227ENST00000554491 DUSP2Q05923 314 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 ACTN3Q08043 901 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-227ENST00000554491 KLHL30Q0D2K2 578 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 PPP2R5CQ13362 524 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 GRAPQ13588 217 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 LRRC32Q14392 662 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 ARL13BQ3SXY8 428 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 ARHGAP29Q52LW3 1261 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 PDCD4Q53EL6 469 aaKnown RBP4.62□□□□□ -1.67
ATXN3-227ENST00000554491 RILPL1Q5EBL4 403 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 COLEC12Q5KU26 742 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 DEPDC1Q5TB30 811 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 STRIP1Q5VSL9 837 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms