RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 RXRGP48443 463 aa11.96□□□□□ -0.49
TUBB3-204ENST00000554116 RPL34P49207 117 aaKnown RBP11.96□□□□□ -0.49
TUBB3-204ENST00000554116 FMO5P49326 533 aa11.96□□□□□ -0.49
TUBB3-204ENST00000554116 NUMBP49757 651 aa11.96□□□□□ -0.49
TUBB3-204ENST00000554116 STK19P49842 368 aaPredicted RBP11.96□□□□□ -0.49
TUBB3-204ENST00000554116 CCR5P51681 352 aa11.96□□□□□ -0.49
TUBB3-204ENST00000554116 ADPRHP54922 357 aa11.96□□□□□ -0.49
TUBB3-204ENST00000554116 TBX4P57082 545 aa11.96□□□□□ -0.49
TUBB3-204ENST00000554116 SEMG2Q02383 582 aa11.96□□□□□ -0.49
TUBB3-204ENST00000554116 EIF4EBP2Q13542 120 aaPredicted RBP11.96□□□□□ -0.49
TUBB3-204ENST00000554116 DCAF6Q58WW2 860 aa11.96□□□□□ -0.49
TUBB3-204ENST00000554116 MS4A13Q5J8X5 152 aa11.96□□□□□ -0.49
TUBB3-204ENST00000554116 PITRM1Q5JRX3 1037 aa11.96□□□□□ -0.49
TUBB3-204ENST00000554116 HES3Q5TGS1 186 aa11.96□□□□□ -0.49
TUBB3-204ENST00000554116 SYPL2Q5VXT5 272 aa11.96□□□□□ -0.49
TUBB3-204ENST00000554116 ADAT2Q7Z6V5 191 aaKnown RBP11.96□□□□□ -0.49
TUBB3-204ENST00000554116 MFN1Q8IWA4 741 aa11.96□□□□□ -0.49
TUBB3-204ENST00000554116 STK40Q8N2I9 435 aa11.96□□□□□ -0.49
TUBB3-204ENST00000554116 KDM1BQ8NB78 822 aa11.96□□□□□ -0.49
TUBB3-204ENST00000554116 LMO3Q8TAP4 145 aa11.96□□□□□ -0.49
TUBB3-204ENST00000554116 DQX1Q8TE96 717 aaKnown RBP11.96□□□□□ -0.49
TUBB3-204ENST00000554116 IRGQQ8WZA9 623 aa11.96□□□□□ -0.49
TUBB3-204ENST00000554116 RPL10LQ96L21 214 aaKnown RBP11.96□□□□□ -0.49
TUBB3-204ENST00000554116 FCRL3Q96P31 734 aaPredicted RBP11.96□□□□□ -0.49
TUBB3-204ENST00000554116 IPO9Q96P70 1041 aaKnown RBP11.96□□□□□ -0.49
TUBB3-204ENST00000554116 SRRTQ9BXP5 876 aaKnown RBP11.96□□□□□ -0.49
TUBB3-204ENST00000554116 SARDHQ9UL12 918 aa11.96□□□□□ -0.49
TUBB3-204ENST00000554116 FZD4Q9ULV1 537 aa11.96□□□□□ -0.49
TUBB3-204ENST00000554116 SCML1Q9UN30 329 aa11.96□□□□□ -0.49
TUBB3-204ENST00000554116 TARSL2A2RTX5 802 aaKnown RBP11.95□□□□□ -0.5
TUBB3-204ENST00000554116 TLR4O00206 839 aa11.95□□□□□ -0.5
TUBB3-204ENST00000554116 RRP8O43159 456 aaKnown RBP11.95□□□□□ -0.5
TUBB3-204ENST00000554116 RFPL3O75679 317 aa11.95□□□□□ -0.5
TUBB3-204ENST00000554116 RNASEH2AO75792 299 aaKnown RBP11.95□□□□□ -0.5
TUBB3-204ENST00000554116 GNA14O95837 355 aa11.95□□□□□ -0.5
TUBB3-204ENST00000554116 ASLP04424 464 aa11.95□□□□□ -0.5
TUBB3-204ENST00000554116 C1SP09871 688 aa11.95□□□□□ -0.5
TUBB3-204ENST00000554116 JUPP14923 745 aa11.95□□□□□ -0.5
TUBB3-204ENST00000554116 C21orf59P57076 290 aa11.95□□□□□ -0.5
TUBB3-204ENST00000554116 SLC8A3P57103 927 aa11.95□□□□□ -0.5
TUBB3-204ENST00000554116 PITX1P78337 314 aaPredicted RBP11.95□□□□□ -0.5
TUBB3-204ENST00000554116 CETN1Q12798 172 aa11.95□□□□□ -0.5
TUBB3-204ENST00000554116 LRMPQ12912 555 aa11.95□□□□□ -0.5
TUBB3-204ENST00000554116 CNGA2Q16280 664 aa11.95□□□□□ -0.5
TUBB3-204ENST00000554116 C6orf118Q5T5N4 469 aa11.95□□□□□ -0.5
TUBB3-204ENST00000554116 NUGGCQ68CJ6 796 aa11.95□□□□□ -0.5
TUBB3-204ENST00000554116 UNC45BQ8IWX7 931 aa11.95□□□□□ -0.5
TUBB3-204ENST00000554116 SIX6OS1Q8N1H7 587 aa11.95□□□□□ -0.5
TUBB3-204ENST00000554116 ZNF843Q8N446 348 aa11.95□□□□□ -0.5
TUBB3-204ENST00000554116 CARNMT1Q8N4J0 409 aa11.95□□□□□ -0.5
TUBB3-204ENST00000554116 HJURPQ8NCD3 748 aaPredicted RBP11.95□□□□□ -0.5
TUBB3-204ENST00000554116 GANCQ8TET4 914 aa11.95□□□□□ -0.5
TUBB3-204ENST00000554116 FRS2Q8WU20 508 aa11.95□□□□□ -0.5
TUBB3-204ENST00000554116 BAP1Q92560 729 aa11.95□□□□□ -0.5
TUBB3-204ENST00000554116 HESX1Q9UBX0 185 aa11.95□□□□□ -0.5
TUBB3-204ENST00000554116 KIAA1257Q9ULG3 409 aa11.95□□□□□ -0.5
TUBB3-204ENST00000554116 NAALADL1Q9UQQ1 740 aa11.95□□□□□ -0.5
TUBB3-204ENST00000554116 NCKAP1Q9Y2A7 1128 aa11.95□□□□□ -0.5
TUBB3-204ENST00000554116 UBR5O95071 2799 aaPredicted RBP11.95□□□□□ -0.5
TUBB3-204ENST00000554116 TEX51A0A1B0GUA7 166 aa11.94□□□□□ -0.5
TUBB3-204ENST00000554116 LRRC72A6NJI9 287 aa11.94□□□□□ -0.5
TUBB3-204ENST00000554116 CYSRT1A8MQ03 144 aa11.94□□□□□ -0.5
TUBB3-204ENST00000554116 J3QKU1 62 aa11.94□□□□□ -0.5
TUBB3-204ENST00000554116 TRIM38O00635 465 aa11.94□□□□□ -0.5
TUBB3-204ENST00000554116 PMM2O15305 246 aa11.94□□□□□ -0.5
TUBB3-204ENST00000554116 FGFR1OPO95684 399 aaKnown RBP11.94□□□□□ -0.5
TUBB3-204ENST00000554116 ITGAVP06756 1048 aa11.94□□□□□ -0.5
TUBB3-204ENST00000554116 SRPRAP08240 638 aaKnown RBP11.94□□□□□ -0.5
TUBB3-204ENST00000554116 GIMD1P0DJR0 217 aa11.94□□□□□ -0.5
TUBB3-204ENST00000554116 GOT1P17174 413 aa11.94□□□□□ -0.5
TUBB3-204ENST00000554116 BRD2P25440 801 aaKnown RBP11.94□□□□□ -0.5
TUBB3-204ENST00000554116 MZF1P28698 734 aaPredicted RBP11.94□□□□□ -0.5
TUBB3-204ENST00000554116 SLC11A2P49281 568 aa11.94□□□□□ -0.5
TUBB3-204ENST00000554116 INSM1Q01101 510 aaPredicted RBP11.94□□□□□ -0.5
TUBB3-204ENST00000554116 PROX2Q3B8N5 592 aa11.94□□□□□ -0.5
TUBB3-204ENST00000554116 TMEM270Q6UE05 265 aa11.94□□□□□ -0.5
TUBB3-204ENST00000554116 SLC25A45Q8N413 288 aa11.94□□□□□ -0.5
TUBB3-204ENST00000554116 OR52K2Q8NGK3 314 aa11.94□□□□□ -0.5
TUBB3-204ENST00000554116 SNIP1Q8TAD8 396 aaKnown RBP11.94□□□□□ -0.5
TUBB3-204ENST00000554116 RFFLQ8WZ73 363 aa11.94□□□□□ -0.5
TUBB3-204ENST00000554116 ALG14Q96F25 216 aa11.94□□□□□ -0.5
TUBB3-204ENST00000554116 PRMT1Q99873 361 aaKnown RBP11.94□□□□□ -0.5
TUBB3-204ENST00000554116 NRSN2Q9GZP1 204 aa11.94□□□□□ -0.5
TUBB3-204ENST00000554116 CLSTN2Q9H4D0 955 aa11.94□□□□□ -0.5
TUBB3-204ENST00000554116 ERVMER34-1Q9H9K5 563 aa11.94□□□□□ -0.5
TUBB3-204ENST00000554116 AASDHPPTQ9NRN7 309 aa11.94□□□□□ -0.5
TUBB3-204ENST00000554116 CYTH4Q9UIA0 394 aa11.94□□□□□ -0.5
TUBB3-204ENST00000554116 RWDD2AQ9UIY3 292 aa11.94□□□□□ -0.5
TUBB3-204ENST00000554116 CA5BQ9Y2D0 317 aa11.94□□□□□ -0.5
TUBB3-204ENST00000554116 EDDM13A0A1B0GTR0 161 aa11.93□□□□□ -0.5
TUBB3-204ENST00000554116 RNF103O00237 685 aa11.93□□□□□ -0.5
TUBB3-204ENST00000554116 P4HA2O15460 535 aa11.93□□□□□ -0.5
TUBB3-204ENST00000554116 RTN2O75298 545 aa11.93□□□□□ -0.5
TUBB3-204ENST00000554116 LUC7L3O95232 432 aaKnown RBP11.93□□□□□ -0.5
TUBB3-204ENST00000554116 IGLV3-25P01717 112 aa11.93□□□□□ -0.5
TUBB3-204ENST00000554116 PAEPP09466 180 aa11.93□□□□□ -0.5
TUBB3-204ENST00000554116 CDK4P11802 303 aa11.93□□□□□ -0.5
TUBB3-204ENST00000554116 ABCB4P21439 1286 aa11.93□□□□□ -0.5
TUBB3-204ENST00000554116 TBXAS1P24557 533 aaPredicted RBP11.93□□□□□ -0.5
TUBB3-204ENST00000554116 GPD2P43304 727 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms