RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 LRRC52Q8N7C0 313 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 NSUN7Q8NE18 718 aaKnown RBP7.24□□□□□ -1.25
ATXN3-224ENST00000554040 CXorf38Q8TB03 319 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 RFFLQ8WZ73 363 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 SNX19Q92543 992 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 PRCCQ92733 491 aaPredicted RBP7.24□□□□□ -1.25
ATXN3-224ENST00000554040 WBP2Q969T9 261 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 MYLPFQ96A32 169 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 NAF1Q96HR8 494 aaKnown RBP7.24□□□□□ -1.25
ATXN3-224ENST00000554040 HRASLS5Q96KN8 279 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 C8orf48Q96LL4 319 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 SLITRK1Q96PX8 696 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 SYT15Q9BQS2 421 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 MMTAG2Q9BU76 263 aaKnown RBP7.24□□□□□ -1.25
ATXN3-224ENST00000554040 BBS2Q9BXC9 721 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 C6orf106Q9H6K1 298 aaPredicted RBP7.24□□□□□ -1.25
ATXN3-224ENST00000554040 CPNE5Q9HCH3 593 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 CRTAC1Q9NQ79 661 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 THAP10Q9P2Z0 257 aaPredicted RBP7.24□□□□□ -1.25
ATXN3-224ENST00000554040 CHORDC1Q9UHD1 332 aaPredicted RBP7.24□□□□□ -1.25
ATXN3-224ENST00000554040 AGO2Q9UKV8 859 aaKnown RBP7.24□□□□□ -1.25
ATXN3-224ENST00000554040 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.24□□□□□ -1.25
ATXN3-224ENST00000554040 SNX9Q9Y5X1 595 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 STYXL1Q9Y6J8 313 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 NUMA1Q14980 2115 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 TLN1Q9Y490 2541 aaKnown RBP7.23□□□□□ -1.25
ATXN3-224ENST00000554040 LAD1O00515 517 aa7.23□□□□□ -1.25
ATXN3-224ENST00000554040 SYNCRIPO60506 623 aaKnown RBP7.23□□□□□ -1.25
ATXN3-224ENST00000554040 GREM1O60565 184 aa7.23□□□□□ -1.25
ATXN3-224ENST00000554040 IL18RAPO95256 599 aa7.23□□□□□ -1.25
ATXN3-224ENST00000554040 ITGB3P05106 788 aa7.23□□□□□ -1.25
ATXN3-224ENST00000554040 PDGFRBP09619 1106 aa7.23□□□□□ -1.25
ATXN3-224ENST00000554040 ACADMP11310 421 aa7.23□□□□□ -1.25
ATXN3-224ENST00000554040 KRT10P13645 584 aa7.23□□□□□ -1.25
ATXN3-224ENST00000554040 ACO1P21399 889 aaKnown RBP7.23□□□□□ -1.25
ATXN3-224ENST00000554040 GLDCP23378 1020 aa7.23□□□□□ -1.25
ATXN3-224ENST00000554040 YWHAQP27348 245 aa7.23□□□□□ -1.25
ATXN3-224ENST00000554040 TRAPPC10P48553 1259 aa7.23□□□□□ -1.25
ATXN3-224ENST00000554040 PSMC1P62191 440 aaKnown RBP7.23□□□□□ -1.25
ATXN3-224ENST00000554040 RBP5P82980 135 aa7.23□□□□□ -1.25
ATXN3-224ENST00000554040 TFAMQ00059 246 aaKnown RBP7.23□□□□□ -1.25
ATXN3-224ENST00000554040 GTF2BQ00403 316 aa7.23□□□□□ -1.25
ATXN3-224ENST00000554040 ZRSR1Q15695 479 aaKnown RBP7.23□□□□□ -1.25
ATXN3-224ENST00000554040 IL17AQ16552 155 aa7.23□□□□□ -1.25
ATXN3-224ENST00000554040 HYIQ5T013 277 aa7.23□□□□□ -1.25
ATXN3-224ENST00000554040 SNX30Q5VWJ9 437 aa7.23□□□□□ -1.25
ATXN3-224ENST00000554040 LAYNQ6UX15 382 aa7.23□□□□□ -1.25
ATXN3-224ENST00000554040 TPGS1Q6ZTW0 290 aa7.23□□□□□ -1.25
ATXN3-224ENST00000554040 HTR3DQ70Z44 454 aa7.23□□□□□ -1.25
ATXN3-224ENST00000554040 GATAD2AQ86YP4 633 aa7.23□□□□□ -1.25
ATXN3-224ENST00000554040 MYCT1Q8N699 235 aa7.23□□□□□ -1.25
ATXN3-224ENST00000554040 DCBLD1Q8N8Z6 715 aa7.23□□□□□ -1.25
ATXN3-224ENST00000554040 NECAB1Q8N987 351 aa7.23□□□□□ -1.25
ATXN3-224ENST00000554040 CACTINQ8WUQ7 758 aaKnown RBP7.23□□□□□ -1.25
ATXN3-224ENST00000554040 KBTBD7Q8WVZ9 684 aa7.23□□□□□ -1.25
ATXN3-224ENST00000554040 OVCA2Q8WZ82 227 aa7.23□□□□□ -1.25
ATXN3-224ENST00000554040 PCED1BQ96HM7 432 aa7.23□□□□□ -1.25
ATXN3-224ENST00000554040 HIC2Q96JB3 615 aa7.23□□□□□ -1.25
ATXN3-224ENST00000554040 ZNF578Q96N58 590 aaPredicted RBP7.23□□□□□ -1.25
ATXN3-224ENST00000554040 ELF4Q99607 663 aaPredicted RBP7.23□□□□□ -1.25
ATXN3-224ENST00000554040 TRIM9Q9C026 710 aa7.23□□□□□ -1.25
ATXN3-224ENST00000554040 FOXP1Q9H334 677 aaPredicted RBP7.23□□□□□ -1.25
ATXN3-224ENST00000554040 FBXO10Q9UK96 956 aa7.23□□□□□ -1.25
ATXN3-224ENST00000554040 ODF2LQ9ULJ1 636 aa7.23□□□□□ -1.25
ATXN3-224ENST00000554040 CLCA2Q9UQC9 943 aa7.23□□□□□ -1.25
ATXN3-224ENST00000554040 UBR5O95071 2799 aaPredicted RBP7.22□□□□□ -1.25
ATXN3-224ENST00000554040 TISP43B9A030 160 aa7.22□□□□□ -1.25
ATXN3-224ENST00000554040 K7ENM7 598 aa7.22□□□□□ -1.25
ATXN3-224ENST00000554040 BIN1O00499 593 aa7.22□□□□□ -1.25
ATXN3-224ENST00000554040 VILLO15195 856 aa7.22□□□□□ -1.25
ATXN3-224ENST00000554040 TSPAN3O60637 253 aa7.22□□□□□ -1.25
ATXN3-224ENST00000554040 JAK2O60674 1132 aa7.22□□□□□ -1.25
ATXN3-224ENST00000554040 FBXO24O75426 580 aa7.22□□□□□ -1.25
ATXN3-224ENST00000554040 ITGAVP06756 1048 aa7.22□□□□□ -1.25
ATXN3-224ENST00000554040 ITIH2P19823 946 aa7.22□□□□□ -1.25
ATXN3-224ENST00000554040 CD27P26842 260 aa7.22□□□□□ -1.25
ATXN3-224ENST00000554040 ACSL1P33121 698 aa7.22□□□□□ -1.25
ATXN3-224ENST00000554040 ABCD1P33897 745 aa7.22□□□□□ -1.25
ATXN3-224ENST00000554040 TUBP50607 506 aa7.22□□□□□ -1.25
ATXN3-224ENST00000554040 ZNF131P52739 623 aa7.22□□□□□ -1.25
ATXN3-224ENST00000554040 COPAP53621 1224 aa7.22□□□□□ -1.25
ATXN3-224ENST00000554040 GUCY1B3Q02153 619 aa7.22□□□□□ -1.25
ATXN3-224ENST00000554040 PDE4CQ08493 712 aa7.22□□□□□ -1.25
ATXN3-224ENST00000554040 POSTNQ15063 836 aa7.22□□□□□ -1.25
ATXN3-224ENST00000554040 SHBQ15464 509 aa7.22□□□□□ -1.25
ATXN3-224ENST00000554040 PRAMEF14Q5SWL7 426 aa7.22□□□□□ -1.25
ATXN3-224ENST00000554040 ADAT2Q7Z6V5 191 aaKnown RBP7.22□□□□□ -1.25
ATXN3-224ENST00000554040 FAM124AQ86V42 546 aa7.22□□□□□ -1.25
ATXN3-224ENST00000554040 DHX40Q8IX18 779 aaKnown RBP7.22□□□□□ -1.25
ATXN3-224ENST00000554040 NUP93Q8N1F7 819 aa7.22□□□□□ -1.25
ATXN3-224ENST00000554040 EID2Q8N6I1 236 aa7.22□□□□□ -1.25
ATXN3-224ENST00000554040 PDZD8Q8NEN9 1154 aa7.22□□□□□ -1.25
ATXN3-224ENST00000554040 MYCBPAPQ8TBZ2 947 aa7.22□□□□□ -1.25
ATXN3-224ENST00000554040 SAP25Q8TEE9 199 aa7.22□□□□□ -1.25
ATXN3-224ENST00000554040 GTF3C6Q969F1 213 aa7.22□□□□□ -1.25
ATXN3-224ENST00000554040 FBXO32Q969P5 355 aa7.22□□□□□ -1.25
ATXN3-224ENST00000554040 FIZ1Q96SL8 496 aa7.22□□□□□ -1.25
ATXN3-224ENST00000554040 KRTAP4-7Q9BYR0 210 aa7.22□□□□□ -1.25
ATXN3-224ENST00000554040 TRIM4Q9C037 500 aa7.22□□□□□ -1.25
ATXN3-224ENST00000554040 CCSER2Q9H7U1 834 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms