RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 SLC28A3Q9HAS3 691 aa11.17□□□□□ -0.62
PABPN1-203ENST00000553960 DNMT3BQ9UBC3 853 aaKnown RBP11.17□□□□□ -0.62
PABPN1-203ENST00000553960 ANAPC5Q9UJX4 755 aa11.17□□□□□ -0.62
PABPN1-203ENST00000553960 AGO1Q9UL18 857 aaKnown RBP11.17□□□□□ -0.62
PABPN1-203ENST00000553960 SNX24Q9Y343 169 aa11.17□□□□□ -0.62
PABPN1-203ENST00000553960 HEY1Q9Y5J3 304 aa11.17□□□□□ -0.62
PABPN1-203ENST00000553960 KIF26AQ9ULI4 1882 aaPredicted RBP11.17□□□□□ -0.62
PABPN1-203ENST00000553960 MYO18AQ92614 2054 aaKnown RBP11.16□□□□□ -0.62
PABPN1-203ENST00000553960 ESYT3A0FGR9 886 aa11.16□□□□□ -0.62
PABPN1-203ENST00000553960 C2orf78A6NCI8 922 aa11.16□□□□□ -0.62
PABPN1-203ENST00000553960 ARHGAP42A6NI28 874 aa11.16□□□□□ -0.62
PABPN1-203ENST00000553960 CCDC85CA6NKD9 419 aa11.16□□□□□ -0.62
PABPN1-203ENST00000553960 KCNN4O15554 427 aa11.16□□□□□ -0.62
PABPN1-203ENST00000553960 PEX11BO96011 259 aa11.16□□□□□ -0.62
PABPN1-203ENST00000553960 RHOP08100 348 aa11.16□□□□□ -0.62
PABPN1-203ENST00000553960 GSTA2P09210 222 aa11.16□□□□□ -0.62
PABPN1-203ENST00000553960 CES1P23141 567 aa11.16□□□□□ -0.62
PABPN1-203ENST00000553960 KCNQ1P51787 676 aa11.16□□□□□ -0.62
PABPN1-203ENST00000553960 PLTPP55058 493 aa11.16□□□□□ -0.62
PABPN1-203ENST00000553960 GDF10P55107 478 aa11.16□□□□□ -0.62
PABPN1-203ENST00000553960 DYNLT1P63172 113 aa11.16□□□□□ -0.62
PABPN1-203ENST00000553960 IL10RBQ08334 325 aa11.16□□□□□ -0.62
PABPN1-203ENST00000553960 GPS1Q13098 491 aa11.16□□□□□ -0.62
PABPN1-203ENST00000553960 SLC12A1Q13621 1099 aa11.16□□□□□ -0.62
PABPN1-203ENST00000553960 FRG1Q14331 258 aaKnown RBP11.16□□□□□ -0.62
PABPN1-203ENST00000553960 ANO4Q32M45 955 aa11.16□□□□□ -0.62
PABPN1-203ENST00000553960 RALGPS1Q5JS13 557 aa11.16□□□□□ -0.62
PABPN1-203ENST00000553960 ANKRD20A2Q5SQ80 823 aa11.16□□□□□ -0.62
PABPN1-203ENST00000553960 ANKRD20A1Q5TYW2 823 aa11.16□□□□□ -0.62
PABPN1-203ENST00000553960 ANKRD20A3Q5VUR7 823 aa11.16□□□□□ -0.62
PABPN1-203ENST00000553960 PPP2R2DQ66LE6 453 aa11.16□□□□□ -0.62
PABPN1-203ENST00000553960 ITPRIPL1Q6GPH6 555 aa11.16□□□□□ -0.62
PABPN1-203ENST00000553960 C1orf228Q6PIY5 440 aa11.16□□□□□ -0.62
PABPN1-203ENST00000553960 METTL3Q86U44 580 aaKnown RBP11.16□□□□□ -0.62
PABPN1-203ENST00000553960 MIB1Q86YT6 1006 aa11.16□□□□□ -0.62
PABPN1-203ENST00000553960 CCDC13Q8IYE1 715 aa11.16□□□□□ -0.62
PABPN1-203ENST00000553960 GLIS1Q8NBF1 620 aa11.16□□□□□ -0.62
PABPN1-203ENST00000553960 SHKBP1Q8TBC3 707 aa11.16□□□□□ -0.62
PABPN1-203ENST00000553960 TADA1Q96BN2 335 aa11.16□□□□□ -0.62
PABPN1-203ENST00000553960 TTC25Q96NG3 672 aa11.16□□□□□ -0.62
PABPN1-203ENST00000553960 SLC46A2Q9BY10 475 aa11.16□□□□□ -0.62
PABPN1-203ENST00000553960 ACE2Q9BYF1 805 aaPredicted RBP11.16□□□□□ -0.62
PABPN1-203ENST00000553960 NEUROG2Q9H2A3 272 aa11.16□□□□□ -0.62
PABPN1-203ENST00000553960 ACBD3Q9H3P7 528 aa11.16□□□□□ -0.62
PABPN1-203ENST00000553960 XAB2Q9HCS7 855 aaKnown RBP11.16□□□□□ -0.62
PABPN1-203ENST00000553960 HAUS2Q9NVX0 235 aa11.16□□□□□ -0.62
PABPN1-203ENST00000553960 GDE1Q9NZC3 331 aa11.16□□□□□ -0.62
PABPN1-203ENST00000553960 MARK1Q9P0L2 795 aa11.16□□□□□ -0.62
PABPN1-203ENST00000553960 TBC1D14Q9P2M4 693 aa11.16□□□□□ -0.62
PABPN1-203ENST00000553960 XPO7Q9UIA9 1087 aaKnown RBP11.16□□□□□ -0.62
PABPN1-203ENST00000553960 LSM7Q9UK45 103 aaKnown RBP11.16□□□□□ -0.62
PABPN1-203ENST00000553960 DOCK6Q96HP0 2047 aa11.16□□□□□ -0.62
PABPN1-203ENST00000553960 LAMA2P24043 3122 aaKnown RBP11.15□□□□□ -0.62
PABPN1-203ENST00000553960 SYNJ2BP-COX16A0A087WUM0 186 aa11.15□□□□□ -0.62
PABPN1-203ENST00000553960 H0YGN5 161 aa11.15□□□□□ -0.62
PABPN1-203ENST00000553960 SLC9A3R1O14745 358 aaPredicted RBP11.15□□□□□ -0.62
PABPN1-203ENST00000553960 SPAG6O75602 509 aa11.15□□□□□ -0.62
PABPN1-203ENST00000553960 FAM153BP0C7A2 387 aa11.15□□□□□ -0.62
PABPN1-203ENST00000553960 VAV1P15498 845 aa11.15□□□□□ -0.62
PABPN1-203ENST00000553960 EPCAMP16422 314 aa11.15□□□□□ -0.62
PABPN1-203ENST00000553960 CORO1AP31146 461 aaKnown RBP11.15□□□□□ -0.62
PABPN1-203ENST00000553960 PBX2P40425 430 aa11.15□□□□□ -0.62
PABPN1-203ENST00000553960 RENBPP51606 427 aa11.15□□□□□ -0.62
PABPN1-203ENST00000553960 ITGA8P53708 1063 aa11.15□□□□□ -0.62
PABPN1-203ENST00000553960 USP4Q13107 963 aa11.15□□□□□ -0.62
PABPN1-203ENST00000553960 SERINC3Q13530 473 aa11.15□□□□□ -0.62
PABPN1-203ENST00000553960 HLTFQ14527 1009 aaKnown RBP eCLIP11.15□□□□□ -0.62
PABPN1-203ENST00000553960 FAM153CQ494X1 144 aa11.15□□□□□ -0.62
PABPN1-203ENST00000553960 C6orf118Q5T5N4 469 aa11.15□□□□□ -0.62
PABPN1-203ENST00000553960 EMC10Q5UCC4 262 aa11.15□□□□□ -0.62
PABPN1-203ENST00000553960 IZUMO3Q5VZ72 239 aa11.15□□□□□ -0.62
PABPN1-203ENST00000553960 KCTD11Q693B1 232 aa11.15□□□□□ -0.62
PABPN1-203ENST00000553960 ZC3H18Q86VM9 953 aaKnown RBP11.15□□□□□ -0.62
PABPN1-203ENST00000553960 CCNJLQ8IV13 435 aa11.15□□□□□ -0.62
PABPN1-203ENST00000553960 HJURPQ8NCD3 748 aaPredicted RBP11.15□□□□□ -0.62
PABPN1-203ENST00000553960 MICAL1Q8TDZ2 1067 aa11.15□□□□□ -0.62
PABPN1-203ENST00000553960 IFT81Q8WYA0 676 aa11.15□□□□□ -0.62
PABPN1-203ENST00000553960 IGSF8Q969P0 613 aa11.15□□□□□ -0.62
PABPN1-203ENST00000553960 E2F7Q96AV8 911 aa11.15□□□□□ -0.62
PABPN1-203ENST00000553960 FCRL5Q96RD9 977 aa11.15□□□□□ -0.62
PABPN1-203ENST00000553960 SH3GL2Q99962 352 aa11.15□□□□□ -0.62
PABPN1-203ENST00000553960 C19orf43Q9BQ61 176 aa11.15□□□□□ -0.62
PABPN1-203ENST00000553960 NAT9Q9BTE0 207 aa11.15□□□□□ -0.62
PABPN1-203ENST00000553960 SLC2A11Q9BYW1 496 aa11.15□□□□□ -0.62
PABPN1-203ENST00000553960 NACA2Q9H009 215 aa11.15□□□□□ -0.62
PABPN1-203ENST00000553960 SIK2Q9H0K1 926 aa11.15□□□□□ -0.62
PABPN1-203ENST00000553960 GBA3Q9H227 469 aa11.15□□□□□ -0.62
PABPN1-203ENST00000553960 TLE6Q9H808 572 aa11.15□□□□□ -0.62
PABPN1-203ENST00000553960 ARNT2Q9HBZ2 717 aa11.15□□□□□ -0.62
PABPN1-203ENST00000553960 MED4Q9NPJ6 270 aa11.15□□□□□ -0.62
PABPN1-203ENST00000553960 VPS45Q9NRW7 570 aa11.15□□□□□ -0.62
PABPN1-203ENST00000553960 COX16Q9P0S2 106 aa11.15□□□□□ -0.62
PABPN1-203ENST00000553960 FAM153AQ9UHL3 310 aa11.15□□□□□ -0.62
PABPN1-203ENST00000553960 NUDT5Q9UKK9 219 aa11.15□□□□□ -0.62
PABPN1-203ENST00000553960 HPCAL4Q9UM19 191 aa11.15□□□□□ -0.62
PABPN1-203ENST00000553960 ATP8A1Q9Y2Q0 1164 aa11.15□□□□□ -0.62
PABPN1-203ENST00000553960 NFS1Q9Y697 457 aa11.15□□□□□ -0.62
PABPN1-203ENST00000553960 ZFP37Q9Y6Q3 630 aaPredicted RBP11.15□□□□□ -0.62
PABPN1-203ENST00000553960 MYO9BQ13459 2157 aa11.15□□□□□ -0.62
PABPN1-203ENST00000553960 SHROOM3Q8TF72 1996 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms