RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 TKTL1P51854 596 aa9.39□□□□□ -0.91
PRKCH-208ENST00000553846 PPP3CAQ08209 521 aa9.39□□□□□ -0.91
PRKCH-208ENST00000553846 KCNMA1Q12791 1236 aa9.39□□□□□ -0.91
PRKCH-208ENST00000553846 SFSWAPQ12872 951 aaKnown RBP9.39□□□□□ -0.91
PRKCH-208ENST00000553846 ELAVL3Q14576 367 aaKnown RBP9.39□□□□□ -0.91
PRKCH-208ENST00000553846 C3orf38Q5JPI3 329 aa9.39□□□□□ -0.91
PRKCH-208ENST00000553846 PITRM1Q5JRX3 1037 aa9.39□□□□□ -0.91
PRKCH-208ENST00000553846 BSPRYQ5W0U4 402 aa9.39□□□□□ -0.91
PRKCH-208ENST00000553846 XKR5Q6UX68 686 aa9.39□□□□□ -0.91
PRKCH-208ENST00000553846 ZNF574Q6ZN55 896 aaPredicted RBP9.39□□□□□ -0.91
PRKCH-208ENST00000553846 MFN1Q8IWA4 741 aa9.39□□□□□ -0.91
PRKCH-208ENST00000553846 ANKRD52Q8NB46 1076 aa9.39□□□□□ -0.91
PRKCH-208ENST00000553846 KIAA0895Q8NCT3 520 aa9.39□□□□□ -0.91
PRKCH-208ENST00000553846 EDEM1Q92611 657 aa9.39□□□□□ -0.91
PRKCH-208ENST00000553846 AZIN2Q96A70 460 aa9.39□□□□□ -0.91
PRKCH-208ENST00000553846 GRAMD1AQ96CP6 724 aa9.39□□□□□ -0.91
PRKCH-208ENST00000553846 USP28Q96RU2 1077 aa9.39□□□□□ -0.91
PRKCH-208ENST00000553846 SEMA3CQ99985 751 aa9.39□□□□□ -0.91
PRKCH-208ENST00000553846 USP29Q9HBJ7 922 aa9.39□□□□□ -0.91
PRKCH-208ENST00000553846 DACH1Q9UI36 760 aa9.39□□□□□ -0.91
PRKCH-208ENST00000553846 ACSL6Q9UKU0 697 aa9.39□□□□□ -0.91
PRKCH-208ENST00000553846 ABCA12Q86UK0 2595 aa9.39□□□□□ -0.91
PRKCH-208ENST00000553846 PRAMEF26H0Y7S4 382 aa9.38□□□□□ -0.91
PRKCH-208ENST00000553846 K7ESM1 405 aa9.38□□□□□ -0.91
PRKCH-208ENST00000553846 XPO1O14980 1071 aaKnown RBP9.38□□□□□ -0.91
PRKCH-208ENST00000553846 SCAMP1O15126 338 aa9.38□□□□□ -0.91
PRKCH-208ENST00000553846 FFAR2O15552 330 aa9.38□□□□□ -0.91
PRKCH-208ENST00000553846 KLRC4O43908 158 aa9.38□□□□□ -0.91
PRKCH-208ENST00000553846 MAGEC1O60732 1142 aa9.38□□□□□ -0.91
PRKCH-208ENST00000553846 AFPP02771 609 aaKnown RBP9.38□□□□□ -0.91
PRKCH-208ENST00000553846 ITGB2P05107 769 aa9.38□□□□□ -0.91
PRKCH-208ENST00000553846 GP1BBP13224 206 aa9.38□□□□□ -0.91
PRKCH-208ENST00000553846 CD58P19256 250 aa9.38□□□□□ -0.91
PRKCH-208ENST00000553846 MAT2AP31153 395 aaKnown RBP9.38□□□□□ -0.91
PRKCH-208ENST00000553846 STK19P49842 368 aaPredicted RBP9.38□□□□□ -0.91
PRKCH-208ENST00000553846 VASPP50552 380 aaPredicted RBP9.38□□□□□ -0.91
PRKCH-208ENST00000553846 DAB2P98082 770 aa9.38□□□□□ -0.91
PRKCH-208ENST00000553846 ADIGQ0VDE8 80 aa9.38□□□□□ -0.91
PRKCH-208ENST00000553846 SRSF6Q13247 344 aaKnown RBP9.38□□□□□ -0.91
PRKCH-208ENST00000553846 RABEP1Q15276 862 aa9.38□□□□□ -0.91
PRKCH-208ENST00000553846 PIP5KL1Q5T9C9 394 aa9.38□□□□□ -0.91
PRKCH-208ENST00000553846 CCDC81Q6ZN84 652 aa9.38□□□□□ -0.91
PRKCH-208ENST00000553846 ATG14Q6ZNE5 492 aa9.38□□□□□ -0.91
PRKCH-208ENST00000553846 TMC6Q7Z403 805 aa9.38□□□□□ -0.91
PRKCH-208ENST00000553846 ABI3BPQ7Z7G0 1075 aa9.38□□□□□ -0.91
PRKCH-208ENST00000553846 APCDD1Q8J025 514 aa9.38□□□□□ -0.91
PRKCH-208ENST00000553846 ZNF557Q8N988 423 aaPredicted RBP9.38□□□□□ -0.91
PRKCH-208ENST00000553846 HJURPQ8NCD3 748 aaPredicted RBP9.38□□□□□ -0.91
PRKCH-208ENST00000553846 OR13H1Q8NG92 308 aa9.38□□□□□ -0.91
PRKCH-208ENST00000553846 GOLGA5Q8TBA6 731 aa9.38□□□□□ -0.91
PRKCH-208ENST00000553846 TATDN2Q93075 761 aa9.38□□□□□ -0.91
PRKCH-208ENST00000553846 IFT43Q96FT9 208 aa9.38□□□□□ -0.91
PRKCH-208ENST00000553846 FCRL2Q96LA5 508 aaPredicted RBP9.38□□□□□ -0.91
PRKCH-208ENST00000553846 NOX5Q96PH1 765 aa9.38□□□□□ -0.91
PRKCH-208ENST00000553846 NUCKS1Q9H1E3 243 aaKnown RBP9.38□□□□□ -0.91
PRKCH-208ENST00000553846 SLC39A2Q9NP94 309 aa9.38□□□□□ -0.91
PRKCH-208ENST00000553846 PPM1HQ9ULR3 514 aa9.38□□□□□ -0.91
PRKCH-208ENST00000553846 SMC3Q9UQE7 1217 aa9.38□□□□□ -0.91
PRKCH-208ENST00000553846 ICE1Q9Y2F5 2266 aa9.38□□□□□ -0.91
PRKCH-208ENST00000553846 TBC1D3DA0A087WVF3 549 aa9.37□□□□□ -0.91
PRKCH-208ENST00000553846 TBC1D3IA0A087WXS9 549 aa9.37□□□□□ -0.91
PRKCH-208ENST00000553846 TBC1D3EA0A087X179 549 aa9.37□□□□□ -0.91
PRKCH-208ENST00000553846 TBC1D3KA0A087X1G2 549 aa9.37□□□□□ -0.91
PRKCH-208ENST00000553846 TBC1D3FA6NER0 549 aaPredicted RBP9.37□□□□□ -0.91
PRKCH-208ENST00000553846 TBC1D3LB9A6J9 549 aa9.37□□□□□ -0.91
PRKCH-208ENST00000553846 MAPK13O15264 365 aa9.37□□□□□ -0.91
PRKCH-208ENST00000553846 ACSL4O60488 711 aa9.37□□□□□ -0.91
PRKCH-208ENST00000553846 RNGTTO60942 597 aaKnown RBP9.37□□□□□ -0.91
PRKCH-208ENST00000553846 KIF20AO95235 890 aa9.37□□□□□ -0.91
PRKCH-208ENST00000553846 FYNP06241 537 aa9.37□□□□□ -0.91
PRKCH-208ENST00000553846 ITGA2BP08514 1039 aa9.37□□□□□ -0.91
PRKCH-208ENST00000553846 TBC1D3HP0C7X1 549 aa9.37□□□□□ -0.91
PRKCH-208ENST00000553846 THEGLP0DJG4 465 aa9.37□□□□□ -0.91
PRKCH-208ENST00000553846 CR2P20023 1033 aa9.37□□□□□ -0.91
PRKCH-208ENST00000553846 DUSP3P51452 185 aaPredicted RBP9.37□□□□□ -0.91
PRKCH-208ENST00000553846 DAOAP59103 153 aa9.37□□□□□ -0.91
PRKCH-208ENST00000553846 ST8SIA6P61647 398 aa9.37□□□□□ -0.91
PRKCH-208ENST00000553846 ECT2LQ008S8 904 aa9.37□□□□□ -0.91
PRKCH-208ENST00000553846 CNTN1Q12860 1018 aa9.37□□□□□ -0.91
PRKCH-208ENST00000553846 STK4Q13043 487 aa9.37□□□□□ -0.91
PRKCH-208ENST00000553846 ZNF284Q2VY69 593 aa9.37□□□□□ -0.91
PRKCH-208ENST00000553846 ZNF394Q53GI3 561 aa9.37□□□□□ -0.91
PRKCH-208ENST00000553846 MS4A13Q5J8X5 152 aa9.37□□□□□ -0.91
PRKCH-208ENST00000553846 C6orf132Q5T0Z8 1188 aa9.37□□□□□ -0.91
PRKCH-208ENST00000553846 TBC1D3GQ6DHY5 549 aa9.37□□□□□ -0.91
PRKCH-208ENST00000553846 TBC1D3CQ6IPX1 549 aa9.37□□□□□ -0.91
PRKCH-208ENST00000553846 GUSBP11Q6P575 273 aa9.37□□□□□ -0.91
PRKCH-208ENST00000553846 SHC4Q6S5L8 630 aa9.37□□□□□ -0.91
PRKCH-208ENST00000553846 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.37□□□□□ -0.91
PRKCH-208ENST00000553846 GCNT7Q6ZNI0 430 aa9.37□□□□□ -0.91
PRKCH-208ENST00000553846 PRPF39Q86UA1 669 aaKnown RBP9.37□□□□□ -0.91
PRKCH-208ENST00000553846 TBC1D3Q8IZP1 549 aaPredicted RBP9.37□□□□□ -0.91
PRKCH-208ENST00000553846 IFI44Q8TCB0 444 aa9.37□□□□□ -0.91
PRKCH-208ENST00000553846 SEMA4DQ92854 862 aa9.37□□□□□ -0.91
PRKCH-208ENST00000553846 CCDC97Q96F63 343 aaPredicted RBP9.37□□□□□ -0.91
PRKCH-208ENST00000553846 SLC39A13Q96H72 371 aa9.37□□□□□ -0.91
PRKCH-208ENST00000553846 FAXDC2Q96IV6 333 aa9.37□□□□□ -0.91
PRKCH-208ENST00000553846 SPAG5Q96R06 1193 aa9.37□□□□□ -0.91
PRKCH-208ENST00000553846 CCNL2Q96S94 520 aaPredicted RBP9.37□□□□□ -0.91
PRKCH-208ENST00000553846 FAM117AQ9C073 453 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms