RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 ZNF276Q8N554 614 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 CEP112Q8N8E3 955 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 NIPA2Q8N8Q9 360 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 MNS1Q8NEH6 495 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 PDZD8Q8NEN9 1154 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 OR10T2Q8NGX3 314 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 OLIG1Q8TAK6 271 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 SPPL3Q8TCT6 385 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 RNF139Q8WU17 664 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 POF1BQ8WVV4 589 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 RXFP2Q8WXD0 754 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 OVCA2Q8WZ82 227 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 UBE2FQ969M7 185 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 FAM149B1Q96BN6 582 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 ARHGEF26Q96DR7 871 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 RPGRIP1Q96KN7 1286 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 ZNF512Q96ME7 567 aaPredicted RBP5.22□□□□□ -1.57
VTI1B-202ENST00000553619 MCEEQ96PE7 176 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 KLHL5Q96PQ7 755 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 SLITRK1Q96PX8 696 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 ALPK1Q96QP1 1244 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 TMEM209Q96SK2 561 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 DIRC2Q96SL1 478 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 KCNK16Q96T55 309 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 GDF15Q99988 308 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 CLSTN3Q9BQT9 956 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 CNPY3Q9BT09 278 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 DDX23Q9BUQ8 820 aaKnown RBP5.22□□□□□ -1.57
VTI1B-202ENST00000553619 ZBP1Q9H171 429 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 PLEKHA4Q9H4M7 779 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 SLC28A3Q9HAS3 691 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 CYP4F11Q9HBI6 524 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 ENTPD7Q9NQZ7 604 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 TLR9Q9NR96 1032 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 TLR8Q9NR97 1041 aaKnown RBP5.22□□□□□ -1.57
VTI1B-202ENST00000553619 METTL5Q9NRN9 209 aaKnown RBP5.22□□□□□ -1.57
VTI1B-202ENST00000553619 TMLHEQ9NVH6 421 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 GPATCH2Q9NW75 528 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 SLAMF8Q9P0V8 285 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 TJP2Q9UDY2 1190 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 TRIM10Q9UDY6 481 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 SLC12A6Q9UHW9 1150 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 CYTH4Q9UIA0 394 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 CDC23Q9UJX2 597 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 TMEM59LQ9UK28 342 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 TFR2Q9UP52 801 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 SCML2Q9UQR0 700 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 TLR6Q9Y2C9 796 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 PCDHA3Q9Y5H8 950 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 VWA8A3KMH1 1905 aa5.22□□□□□ -1.57
VTI1B-202ENST00000553619 MTCL1Q9Y4B5 1905 aaKnown RBP5.22□□□□□ -1.57
VTI1B-202ENST00000553619 PTPRSQ13332 1948 aa5.21□□□□□ -1.57
VTI1B-202ENST00000553619 TCRBV5S1A1TA0A578 114 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 WDR27A2RRH5 827 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 GRID2IPA4D2P6 1211 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 C2CD4BA6NLJ0 364 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 HHLA1C9JL84 531 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 GFRA2O00451 464 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 PRRG1O14668 218 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 PAPSS1O43252 624 aaPredicted RBP5.21□□□□□ -1.58
VTI1B-202ENST00000553619 PSTPIP1O43586 416 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 PRPSAP2O60256 369 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 DAB1O75553 588 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 BEST1O76090 585 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 ZRANB2O95218 330 aaKnown RBP eCLIP5.21□□□□□ -1.58
VTI1B-202ENST00000553619 FGF19O95750 216 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 LRG1P02750 347 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 KRT1P04264 644 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 OR4Q2P0C623 313 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 SLC2A3P11169 496 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 NCAM1P13591 858 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 COMTP21964 271 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 RFC1P35251 1148 aaPredicted RBP5.21□□□□□ -1.58
VTI1B-202ENST00000553619 KPNA1P52294 538 aaPredicted RBP5.21□□□□□ -1.58
VTI1B-202ENST00000553619 ZNF135P52742 658 aaPredicted RBP5.21□□□□□ -1.58
VTI1B-202ENST00000553619 RABGGTBP53611 331 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 SLC5A3P53794 718 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 AIF1P55008 147 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 RPL7AP62424 266 aaKnown RBP5.21□□□□□ -1.58
VTI1B-202ENST00000553619 SMAD3P84022 425 aaKnown RBP5.21□□□□□ -1.58
VTI1B-202ENST00000553619 TNK2Q07912 1038 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 ADIGQ0VDE8 80 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 PTPROQ16827 1216 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 DDR2Q16832 855 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 WHAMMP3Q1A5X7 153 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 KRTAP19-4Q3LI73 84 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 SLC25A52Q3SY17 297 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 C2CD6Q53TS8 623 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 DCAF6Q58WW2 860 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 C9orf50Q5SZB4 431 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 CCDC70Q6NSX1 233 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 OLFML1Q6UWY5 402 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 STRADAQ7RTN6 431 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 POLNQ7Z5Q5 900 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 PHLDB2Q86SQ0 1253 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 NT5DC3Q86UY8 548 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 TMEM173Q86WV6 379 aaPredicted RBP5.21□□□□□ -1.58
VTI1B-202ENST00000553619 DNAAF5Q86Y56 855 aa5.21□□□□□ -1.58
VTI1B-202ENST00000553619 PSTKQ8IV42 348 aaKnown RBP5.21□□□□□ -1.58
VTI1B-202ENST00000553619 MCATQ8IVS2 390 aaKnown RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms