RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 TPP1O14773 563 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 H2AFYO75367 372 aaKnown RBP13.22□□□□□ -0.29
SHMT2-205ENST00000553474 SERPINE1P05121 402 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 MPOP05164 745 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 PTPN3P26045 913 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 CXCR3P49682 368 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 NDUFV1P49821 464 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 SERPINB8P50452 374 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 CSE1LP55060 971 aaKnown RBP13.22□□□□□ -0.29
SHMT2-205ENST00000553474 COG7P83436 770 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 GALNT2Q10471 571 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 PDE1CQ14123 709 aaPredicted RBP13.22□□□□□ -0.29
SHMT2-205ENST00000553474 MBLAC2Q68D91 279 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 KCTD11Q693B1 232 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 DCLRE1AQ6PJP8 1040 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 LINC00523Q86TU6 105 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 RASSF3Q86WH2 238 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 KLHDC8BQ8IXV7 354 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 TEX9Q8N6V9 391 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.22□□□□□ -0.29
SHMT2-205ENST00000553474 DEFB118Q96PH6 123 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 COLEC11Q9BWP8 271 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 IL22Q9GZX6 179 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 GBA3Q9H227 469 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 SYBUQ9NX95 663 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 TAGLN3Q9UI15 199 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 MID2Q9UJV3 735 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 VANGL2Q9ULK5 521 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 MFHAS1Q9Y4C4 1052 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 TRPV2Q9Y5S1 764 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 SCN10AQ9Y5Y9 1956 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 KIAA0100Q14667 2235 aaKnown RBP13.21□□□□□ -0.29
SHMT2-205ENST00000553474 MYADML2A6NDP7 307 aa13.21□□□□□ -0.29
SHMT2-205ENST00000553474 YJEFN3A6XGL0 299 aa13.21□□□□□ -0.29
SHMT2-205ENST00000553474 TIMM44O43615 452 aa13.21□□□□□ -0.29
SHMT2-205ENST00000553474 DUSP11O75319 330 aaKnown RBP13.21□□□□□ -0.29
SHMT2-205ENST00000553474 GSRP00390 522 aa13.21□□□□□ -0.29
SHMT2-205ENST00000553474 NCAM1P13591 858 aa13.21□□□□□ -0.29
SHMT2-205ENST00000553474 ALOX15P16050 662 aaPredicted RBP13.21□□□□□ -0.29
SHMT2-205ENST00000553474 AOC1P19801 751 aa13.21□□□□□ -0.29
SHMT2-205ENST00000553474 ACAT1P24752 427 aaKnown RBP13.21□□□□□ -0.29
SHMT2-205ENST00000553474 DNAJB1P25685 340 aa13.21□□□□□ -0.29
SHMT2-205ENST00000553474 TYK2P29597 1187 aa13.21□□□□□ -0.29
SHMT2-205ENST00000553474 RAB27AP51159 221 aa13.21□□□□□ -0.29
SHMT2-205ENST00000553474 LIMK2P53671 638 aa13.21□□□□□ -0.29
SHMT2-205ENST00000553474 AQP5P55064 265 aa13.21□□□□□ -0.29
SHMT2-205ENST00000553474 PITX1P78337 314 aaPredicted RBP13.21□□□□□ -0.29
SHMT2-205ENST00000553474 N4BP2L1Q5TBK1 243 aaPredicted RBP13.21□□□□□ -0.29
SHMT2-205ENST00000553474 PM20D1Q6GTS8 502 aa13.21□□□□□ -0.29
SHMT2-205ENST00000553474 LRRN4Q8WUT4 740 aa13.21□□□□□ -0.29
SHMT2-205ENST00000553474 PCED1BQ96HM7 432 aa13.21□□□□□ -0.29
SHMT2-205ENST00000553474 ZNF333Q96JL9 665 aa13.21□□□□□ -0.29
SHMT2-205ENST00000553474 RBBP8Q99708 897 aa13.21□□□□□ -0.29
SHMT2-205ENST00000553474 SMOQ99835 787 aa13.21□□□□□ -0.29
SHMT2-205ENST00000553474 SPC25Q9HBM1 224 aa13.21□□□□□ -0.29
SHMT2-205ENST00000553474 SEPT10Q9P0V9 454 aa13.21□□□□□ -0.29
SHMT2-205ENST00000553474 DSEQ9UL01 958 aa13.21□□□□□ -0.29
SHMT2-205ENST00000553474 BRCA2P51587 3418 aa13.21□□□□□ -0.29
SHMT2-205ENST00000553474 FNDC1Q4ZHG4 1894 aaPredicted RBP13.21□□□□□ -0.3
SHMT2-205ENST00000553474 NRP1O14786 923 aa13.2□□□□□ -0.3
SHMT2-205ENST00000553474 GPR182O15218 404 aa13.2□□□□□ -0.3
SHMT2-205ENST00000553474 KLHL2O95198 593 aa13.2□□□□□ -0.3
SHMT2-205ENST00000553474 PROCP04070 461 aa13.2□□□□□ -0.3
SHMT2-205ENST00000553474 CYP11A1P05108 521 aa13.2□□□□□ -0.3
SHMT2-205ENST00000553474 APOA4P06727 396 aa13.2□□□□□ -0.3
SHMT2-205ENST00000553474 ODC1P11926 461 aa13.2□□□□□ -0.3
SHMT2-205ENST00000553474 GM2AP17900 193 aa13.2□□□□□ -0.3
SHMT2-205ENST00000553474 SLC1A6P48664 564 aa13.2□□□□□ -0.3
SHMT2-205ENST00000553474 PRPSAP1Q14558 356 aa13.2□□□□□ -0.3
SHMT2-205ENST00000553474 MAPRE1Q15691 268 aaKnown RBP13.2□□□□□ -0.3
SHMT2-205ENST00000553474 C6orf163Q5TEZ5 329 aa13.2□□□□□ -0.3
SHMT2-205ENST00000553474 NAPEPLDQ6IQ20 393 aa13.2□□□□□ -0.3
SHMT2-205ENST00000553474 DSTYKQ6XUX3 929 aa13.2□□□□□ -0.3
SHMT2-205ENST00000553474 CCDC117Q8IWD4 279 aaPredicted RBP13.2□□□□□ -0.3
SHMT2-205ENST00000553474 GSTCDQ8NEC7 633 aa13.2□□□□□ -0.3
SHMT2-205ENST00000553474 ZFP42Q96MM3 310 aa13.2□□□□□ -0.3
SHMT2-205ENST00000553474 ACBD6Q9BR61 282 aa13.2□□□□□ -0.3
SHMT2-205ENST00000553474 TRIM56Q9BRZ2 755 aaKnown RBP13.2□□□□□ -0.3
SHMT2-205ENST00000553474 OSBPL2Q9H1P3 480 aa13.2□□□□□ -0.3
SHMT2-205ENST00000553474 CXorf56Q9H5V9 222 aa13.2□□□□□ -0.3
SHMT2-205ENST00000553474 WDCPQ9H6R7 721 aa13.2□□□□□ -0.3
SHMT2-205ENST00000553474 RNF19AQ9NV58 838 aa13.2□□□□□ -0.3
SHMT2-205ENST00000553474 DDIT4Q9NX09 232 aa13.2□□□□□ -0.3
SHMT2-205ENST00000553474 DNAJC28Q9NX36 388 aa13.2□□□□□ -0.3
SHMT2-205ENST00000553474 COPG2Q9UBF2 871 aa13.2□□□□□ -0.3
SHMT2-205ENST00000553474 PPARGC1AQ9UBK2 798 aaKnown RBP13.2□□□□□ -0.3
SHMT2-205ENST00000553474 EMCNQ9ULC0 261 aa13.2□□□□□ -0.3
SHMT2-205ENST00000553474 PATJQ8NI35 1801 aa13.2□□□□□ -0.3
SHMT2-205ENST00000553474 HHLA1C9JL84 531 aa13.2□□□□□ -0.3
SHMT2-205ENST00000553474 SPECC1L-ADORA2AF8WAN1 911 aa13.2□□□□□ -0.3
SHMT2-205ENST00000553474 FGF3P11487 239 aaPredicted RBP13.2□□□□□ -0.3
SHMT2-205ENST00000553474 HK2P52789 917 aa13.2□□□□□ -0.3
SHMT2-205ENST00000553474 PRKAA2P54646 552 aa13.2□□□□□ -0.3
SHMT2-205ENST00000553474 PCLAFQ15004 111 aa13.2□□□□□ -0.3
SHMT2-205ENST00000553474 ZRSR2Q15696 482 aaKnown RBP13.2□□□□□ -0.3
SHMT2-205ENST00000553474 TSNAXIP1Q2TAA8 658 aa13.2□□□□□ -0.3
SHMT2-205ENST00000553474 KIAA0319Q5VV43 1072 aa13.2□□□□□ -0.3
SHMT2-205ENST00000553474 HFE2Q6ZVN8 426 aa13.2□□□□□ -0.3
SHMT2-205ENST00000553474 MRPL10Q7Z7H8 261 aaKnown RBP13.2□□□□□ -0.3
SHMT2-205ENST00000553474 METTL23Q86XA0 190 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms