RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 SIM2Q14190 667 aaPredicted RBP18.98■□□□□ 0.63
CPSF2-202ENST00000553427 ACAP1Q15027 740 aa18.98■□□□□ 0.63
CPSF2-202ENST00000553427 USP39Q53GS9 565 aaKnown RBP18.98■□□□□ 0.63
CPSF2-202ENST00000553427 EFHC2Q5JST6 749 aa18.98■□□□□ 0.63
CPSF2-202ENST00000553427 CCDC122Q5T0U0 273 aa18.98■□□□□ 0.63
CPSF2-202ENST00000553427 C6orf118Q5T5N4 469 aa18.98■□□□□ 0.63
CPSF2-202ENST00000553427 HMGB4Q8WW32 186 aa18.98■□□□□ 0.63
CPSF2-202ENST00000553427 EIF3CQ99613 913 aaKnown RBP18.98■□□□□ 0.63
CPSF2-202ENST00000553427 FEM1AQ9BSK4 669 aa18.98■□□□□ 0.63
CPSF2-202ENST00000553427 TRIM7Q9C029 511 aa18.98■□□□□ 0.63
CPSF2-202ENST00000553427 THAP2Q9H0W7 228 aa18.98■□□□□ 0.63
CPSF2-202ENST00000553427 BCCIPQ9P287 314 aaKnown RBP eCLIP18.98■□□□□ 0.63
CPSF2-202ENST00000553427 ZNF292O60281 2723 aa18.97■□□□□ 0.63
CPSF2-202ENST00000553427 FAM186AA6NE01 2351 aa18.97■□□□□ 0.63
CPSF2-202ENST00000553427 LRIG2O94898 1065 aa18.97■□□□□ 0.63
CPSF2-202ENST00000553427 RHOQP17081 205 aa18.97■□□□□ 0.63
CPSF2-202ENST00000553427 NDUFV2P19404 249 aa18.97■□□□□ 0.63
CPSF2-202ENST00000553427 MZF1P28698 734 aaPredicted RBP18.97■□□□□ 0.63
CPSF2-202ENST00000553427 HTR7P34969 479 aa18.97■□□□□ 0.63
CPSF2-202ENST00000553427 P2RY2P41231 377 aa18.97■□□□□ 0.63
CPSF2-202ENST00000553427 ST8SIA6P61647 398 aa18.97■□□□□ 0.63
CPSF2-202ENST00000553427 GFPT1Q06210 699 aaPredicted RBP18.97■□□□□ 0.63
CPSF2-202ENST00000553427 SEMA3BQ13214 749 aa18.97■□□□□ 0.63
CPSF2-202ENST00000553427 SRSF5Q13243 272 aaKnown RBP18.97■□□□□ 0.63
CPSF2-202ENST00000553427 BYSLQ13895 437 aaKnown RBP18.97■□□□□ 0.63
CPSF2-202ENST00000553427 LAIR1Q6GTX8 287 aa18.97■□□□□ 0.63
CPSF2-202ENST00000553427 METTL3Q86U44 580 aaKnown RBP18.97■□□□□ 0.63
CPSF2-202ENST00000553427 PSTKQ8IV42 348 aaKnown RBP18.97■□□□□ 0.63
CPSF2-202ENST00000553427 APCDD1Q8J025 514 aa18.97■□□□□ 0.63
CPSF2-202ENST00000553427 OR52K2Q8NGK3 314 aa18.97■□□□□ 0.63
CPSF2-202ENST00000553427 TBC1D31Q96DN5 1066 aa18.97■□□□□ 0.63
CPSF2-202ENST00000553427 ZC3H10Q96K80 434 aaKnown RBP18.97■□□□□ 0.63
CPSF2-202ENST00000553427 MRGPRX1Q96LB2 322 aa18.97■□□□□ 0.63
CPSF2-202ENST00000553427 TPSD1Q9BZJ3 242 aa18.97■□□□□ 0.63
CPSF2-202ENST00000553427 DEF6Q9H4E7 631 aa18.97■□□□□ 0.63
CPSF2-202ENST00000553427 MPP6Q9NZW5 540 aa18.97■□□□□ 0.63
CPSF2-202ENST00000553427 MYO1AQ9UBC5 1043 aa18.97■□□□□ 0.63
CPSF2-202ENST00000553427 RAB23Q9ULC3 237 aa18.97■□□□□ 0.63
CPSF2-202ENST00000553427 FZD10Q9ULW2 581 aa18.97■□□□□ 0.63
CPSF2-202ENST00000553427 ERVW-1Q9UQF0 538 aa18.97■□□□□ 0.63
CPSF2-202ENST00000553427 EML5Q05BV3 1969 aa18.96■□□□□ 0.63
CPSF2-202ENST00000553427 ILVBLA1L0T0 632 aa18.96■□□□□ 0.63
CPSF2-202ENST00000553427 FAM72CH0Y354 149 aa18.96■□□□□ 0.63
CPSF2-202ENST00000553427 SRGAP2O75044 1071 aa18.96■□□□□ 0.63
CPSF2-202ENST00000553427 RNF8O76064 485 aa18.96■□□□□ 0.63
CPSF2-202ENST00000553427 EPHX1P07099 455 aa18.96■□□□□ 0.63
CPSF2-202ENST00000553427 RHOCP08134 193 aa18.96■□□□□ 0.63
CPSF2-202ENST00000553427 PCK1P35558 622 aa18.96■□□□□ 0.63
CPSF2-202ENST00000553427 MAPKAPK2P49137 400 aa18.96■□□□□ 0.63
CPSF2-202ENST00000553427 GALCP54803 685 aa18.96■□□□□ 0.63
CPSF2-202ENST00000553427 HNRNPA1L2Q32P51 320 aaKnown RBP18.96■□□□□ 0.63
CPSF2-202ENST00000553427 MAP7D1Q3KQU3 841 aa18.96■□□□□ 0.63
CPSF2-202ENST00000553427 FAM72AQ5TYM5 149 aa18.96■□□□□ 0.63
CPSF2-202ENST00000553427 FAM72DQ6L9T8 149 aa18.96■□□□□ 0.63
CPSF2-202ENST00000553427 SCYL2Q6P3W7 929 aa18.96■□□□□ 0.63
CPSF2-202ENST00000553427 CEP68Q76N32 757 aa18.96■□□□□ 0.63
CPSF2-202ENST00000553427 NLRP14Q86W24 1093 aa18.96■□□□□ 0.63
CPSF2-202ENST00000553427 FAM72BQ86X60 149 aa18.96■□□□□ 0.63
CPSF2-202ENST00000553427 ARFGAP1Q8N6T3 406 aa18.96■□□□□ 0.63
CPSF2-202ENST00000553427 NIPA2Q8N8Q9 360 aa18.96■□□□□ 0.63
CPSF2-202ENST00000553427 TC2NQ8N9U0 490 aa18.96■□□□□ 0.63
CPSF2-202ENST00000553427 DCAF4L2Q8NA75 395 aa18.96■□□□□ 0.63
CPSF2-202ENST00000553427 OR2T3Q8NH03 318 aa18.96■□□□□ 0.63
CPSF2-202ENST00000553427 LOXL4Q96JB6 756 aa18.96■□□□□ 0.63
CPSF2-202ENST00000553427 SPACA7Q96KW9 195 aa18.96■□□□□ 0.63
CPSF2-202ENST00000553427 NHEJ1Q9H9Q4 299 aaPredicted RBP18.96■□□□□ 0.63
CPSF2-202ENST00000553427 TMEM248Q9NWD8 314 aa18.96■□□□□ 0.63
CPSF2-202ENST00000553427 SUN2Q9UH99 717 aa18.96■□□□□ 0.63
CPSF2-202ENST00000553427 EP300Q09472 2414 aaPredicted RBP18.96■□□□□ 0.63
CPSF2-202ENST00000553427 PLXND1Q9Y4D7 1925 aa18.96■□□□□ 0.63
CPSF2-202ENST00000553427 DOCK4Q8N1I0 1966 aa18.95■□□□□ 0.62
CPSF2-202ENST00000553427 CXorf51AA0A1B0GTR3 108 aa18.95■□□□□ 0.62
CPSF2-202ENST00000553427 AKR1B10O60218 316 aa18.95■□□□□ 0.62
CPSF2-202ENST00000553427 ZNF217O75362 1048 aa18.95■□□□□ 0.62
CPSF2-202ENST00000553427 LRCH4O75427 683 aa18.95■□□□□ 0.62
CPSF2-202ENST00000553427 OR1E1P30953 314 aa18.95■□□□□ 0.62
CPSF2-202ENST00000553427 CTSOP43234 321 aaPredicted RBP18.95■□□□□ 0.62
CPSF2-202ENST00000553427 COPAP53621 1224 aa18.95■□□□□ 0.62
CPSF2-202ENST00000553427 PIGHQ14442 188 aaPredicted RBP18.95■□□□□ 0.62
CPSF2-202ENST00000553427 RNF219Q5W0B1 726 aaPredicted RBP18.95■□□□□ 0.62
CPSF2-202ENST00000553427 PRR23BQ6ZRT6 265 aa18.95■□□□□ 0.62
CPSF2-202ENST00000553427 TFAP2DQ7Z6R9 452 aa18.95■□□□□ 0.62
CPSF2-202ENST00000553427 ALYREFQ86V81 257 aaKnown RBP18.95■□□□□ 0.62
CPSF2-202ENST00000553427 RUBCNQ92622 972 aa18.95■□□□□ 0.62
CPSF2-202ENST00000553427 ARHGEF26Q96DR7 871 aa18.95■□□□□ 0.62
CPSF2-202ENST00000553427 CCDC42Q96M95 316 aa18.95■□□□□ 0.62
CPSF2-202ENST00000553427 CHP1Q99653 195 aa18.95■□□□□ 0.62
CPSF2-202ENST00000553427 EPAS1Q99814 870 aa18.95■□□□□ 0.62
CPSF2-202ENST00000553427 C2orf49Q9BVC5 232 aaPredicted RBP18.95■□□□□ 0.62
CPSF2-202ENST00000553427 NUP85Q9BW27 656 aa18.95■□□□□ 0.62
CPSF2-202ENST00000553427 MKRN2Q9H000 416 aaKnown RBP18.95■□□□□ 0.62
CPSF2-202ENST00000553427 UVRAGQ9P2Y5 699 aa18.95■□□□□ 0.62
CPSF2-202ENST00000553427 VPS28Q9UK41 221 aa18.95■□□□□ 0.62
CPSF2-202ENST00000553427 H2AFZP0C0S5 128 aa18.94■□□□□ 0.62
CPSF2-202ENST00000553427 HLA-EP13747 358 aa18.94■□□□□ 0.62
CPSF2-202ENST00000553427 MIPP30301 263 aa18.94■□□□□ 0.62
CPSF2-202ENST00000553427 ETFBP38117 255 aa18.94■□□□□ 0.62
CPSF2-202ENST00000553427 ZNF135P52742 658 aaPredicted RBP18.94■□□□□ 0.62
CPSF2-202ENST00000553427 PLK5Q496M5 336 aa18.94■□□□□ 0.62
CPSF2-202ENST00000553427 CYP4V2Q6ZWL3 525 aaPredicted RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms