RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 CACNA1EQ15878 2313 aa13.34□□□□□ -0.27
ACTN1-207ENST00000553290 ASCC3Q8N3C0 2202 aaKnown RBP13.34□□□□□ -0.27
ACTN1-207ENST00000553290 TTC34A8MYJ7 566 aa13.34□□□□□ -0.27
ACTN1-207ENST00000553290 CEACAM1P13688 526 aa13.34□□□□□ -0.27
ACTN1-207ENST00000553290 TFE3P19532 575 aaPredicted RBP13.34□□□□□ -0.27
ACTN1-207ENST00000553290 MMP8P22894 467 aa13.34□□□□□ -0.27
ACTN1-207ENST00000553290 MZF1P28698 734 aaPredicted RBP13.34□□□□□ -0.27
ACTN1-207ENST00000553290 ACSL1P33121 698 aa13.34□□□□□ -0.27
ACTN1-207ENST00000553290 FLT3P36888 993 aa13.34□□□□□ -0.27
ACTN1-207ENST00000553290 VASPP50552 380 aaPredicted RBP13.34□□□□□ -0.27
ACTN1-207ENST00000553290 NOVA1P51513 510 aaKnown RBP13.34□□□□□ -0.27
ACTN1-207ENST00000553290 FMO1Q01740 532 aa13.34□□□□□ -0.27
ACTN1-207ENST00000553290 C2CD6Q53TS8 623 aa13.34□□□□□ -0.27
ACTN1-207ENST00000553290 C9orf64Q5T6V5 341 aa13.34□□□□□ -0.27
ACTN1-207ENST00000553290 N4BP2L1Q5TBK1 243 aaPredicted RBP13.34□□□□□ -0.27
ACTN1-207ENST00000553290 PSAPL1Q6NUJ1 521 aa13.34□□□□□ -0.27
ACTN1-207ENST00000553290 LRSAM1Q6UWE0 723 aa13.34□□□□□ -0.27
ACTN1-207ENST00000553290 LRRC31Q6UY01 552 aa13.34□□□□□ -0.27
ACTN1-207ENST00000553290 USP30Q70CQ3 517 aa13.34□□□□□ -0.27
ACTN1-207ENST00000553290 C14orf80Q86SX3 495 aa13.34□□□□□ -0.27
ACTN1-207ENST00000553290 DHX40Q8IX18 779 aaKnown RBP13.34□□□□□ -0.27
ACTN1-207ENST00000553290 HDDC3Q8N4P3 179 aa13.34□□□□□ -0.27
ACTN1-207ENST00000553290 AOPEPQ8N6M6 819 aa13.34□□□□□ -0.27
ACTN1-207ENST00000553290 RPL10LQ96L21 214 aaKnown RBP13.34□□□□□ -0.27
ACTN1-207ENST00000553290 C1orf74Q96LT6 269 aa13.34□□□□□ -0.27
ACTN1-207ENST00000553290 FEM1AQ9BSK4 669 aa13.34□□□□□ -0.27
ACTN1-207ENST00000553290 ZDHHC5Q9C0B5 715 aa13.34□□□□□ -0.27
ACTN1-207ENST00000553290 SGK2Q9HBY8 427 aa13.34□□□□□ -0.27
ACTN1-207ENST00000553290 SLCO3A1Q9UIG8 710 aa13.34□□□□□ -0.27
ACTN1-207ENST00000553290 SLC25A13Q9UJS0 675 aa13.34□□□□□ -0.27
ACTN1-207ENST00000553290 TBC1D30Q9Y2I9 924 aa13.34□□□□□ -0.27
ACTN1-207ENST00000553290 UPK3BL1B0FP48 263 aa13.33□□□□□ -0.28
ACTN1-207ENST00000553290 UPK3BL2E5RIL1 263 aa13.33□□□□□ -0.28
ACTN1-207ENST00000553290 BCAT2O15382 392 aaPredicted RBP13.33□□□□□ -0.28
ACTN1-207ENST00000553290 OPHN1O60890 802 aa13.33□□□□□ -0.28
ACTN1-207ENST00000553290 SEMA4FO95754 770 aa13.33□□□□□ -0.28
ACTN1-207ENST00000553290 CHRNB2P17787 502 aa13.33□□□□□ -0.28
ACTN1-207ENST00000553290 CST6Q15828 149 aa13.33□□□□□ -0.28
ACTN1-207ENST00000553290 ANO6Q4KMQ2 910 aa13.33□□□□□ -0.28
ACTN1-207ENST00000553290 SH3PXD2AQ5TCZ1 1133 aa13.33□□□□□ -0.28
ACTN1-207ENST00000553290 APTXQ7Z2E3 356 aaKnown RBP13.33□□□□□ -0.28
ACTN1-207ENST00000553290 BNIPLQ7Z465 357 aa13.33□□□□□ -0.28
ACTN1-207ENST00000553290 ZCCHC9Q8N567 271 aaKnown RBP13.33□□□□□ -0.28
ACTN1-207ENST00000553290 MINDY1Q8N5J2 469 aa13.33□□□□□ -0.28
ACTN1-207ENST00000553290 GANCQ8TET4 914 aa13.33□□□□□ -0.28
ACTN1-207ENST00000553290 ALG14Q96F25 216 aa13.33□□□□□ -0.28
ACTN1-207ENST00000553290 CFAP57Q96MR6 1250 aa13.33□□□□□ -0.28
ACTN1-207ENST00000553290 HAPLN3Q96S86 360 aa13.33□□□□□ -0.28
ACTN1-207ENST00000553290 BPIFA3Q9BQP9 254 aa13.33□□□□□ -0.28
ACTN1-207ENST00000553290 MIR1-1HGQ9H1L0 117 aa13.33□□□□□ -0.28
ACTN1-207ENST00000553290 HSD3B7Q9H2F3 369 aa13.33□□□□□ -0.28
ACTN1-207ENST00000553290 PABPC3Q9H361 631 aaKnown RBP13.33□□□□□ -0.28
ACTN1-207ENST00000553290 SLC32A1Q9H598 525 aa13.33□□□□□ -0.28
ACTN1-207ENST00000553290 C6orf106Q9H6K1 298 aaPredicted RBP13.33□□□□□ -0.28
ACTN1-207ENST00000553290 FSCN3Q9NQT6 498 aa13.33□□□□□ -0.28
ACTN1-207ENST00000553290 ANLNQ9NQW6 1124 aa13.33□□□□□ -0.28
ACTN1-207ENST00000553290 METTL5Q9NRN9 209 aaKnown RBP13.33□□□□□ -0.28
ACTN1-207ENST00000553290 DNAAF2Q9NVR5 837 aaKnown RBP13.33□□□□□ -0.28
ACTN1-207ENST00000553290 EIF2B4Q9UI10 523 aaKnown RBP13.33□□□□□ -0.28
ACTN1-207ENST00000553290 NUMA1Q14980 2115 aa13.33□□□□□ -0.28
ACTN1-207ENST00000553290 FAM170AA1A519 330 aa13.32□□□□□ -0.28
ACTN1-207ENST00000553290 DRGXA6NNA5 263 aa13.32□□□□□ -0.28
ACTN1-207ENST00000553290 SMTNL1A8MU46 457 aa13.32□□□□□ -0.28
ACTN1-207ENST00000553290 ENDOD1O94919 500 aa13.32□□□□□ -0.28
ACTN1-207ENST00000553290 CCDC172P0C7W6 258 aa13.32□□□□□ -0.28
ACTN1-207ENST00000553290 UNGP13051 313 aaPredicted RBP13.32□□□□□ -0.28
ACTN1-207ENST00000553290 SLC8A1P32418 973 aa13.32□□□□□ -0.28
ACTN1-207ENST00000553290 RDXP35241 583 aaKnown RBP13.32□□□□□ -0.28
ACTN1-207ENST00000553290 GGCXP38435 758 aa13.32□□□□□ -0.28
ACTN1-207ENST00000553290 NSFP46459 744 aaKnown RBP13.32□□□□□ -0.28
ACTN1-207ENST00000553290 STK19P49842 368 aaPredicted RBP13.32□□□□□ -0.28
ACTN1-207ENST00000553290 IRAK1P51617 712 aa13.32□□□□□ -0.28
ACTN1-207ENST00000553290 KRT83P78385 493 aa13.32□□□□□ -0.28
ACTN1-207ENST00000553290 SEMA3BQ13214 749 aa13.32□□□□□ -0.28
ACTN1-207ENST00000553290 SLC14A1Q13336 389 aa13.32□□□□□ -0.28
ACTN1-207ENST00000553290 ELAVL3Q14576 367 aaKnown RBP13.32□□□□□ -0.28
ACTN1-207ENST00000553290 TRNP1Q6NT89 227 aa13.32□□□□□ -0.28
ACTN1-207ENST00000553290 SETD3Q86TU7 594 aaPredicted RBP13.32□□□□□ -0.28
ACTN1-207ENST00000553290 MMAAQ8IVH4 418 aaKnown RBP13.32□□□□□ -0.28
ACTN1-207ENST00000553290 ZNF683Q8IZ20 524 aa13.32□□□□□ -0.28
ACTN1-207ENST00000553290 C1orf216Q8TAB5 229 aa13.32□□□□□ -0.28
ACTN1-207ENST00000553290 SLC30A5Q8TAD4 765 aa13.32□□□□□ -0.28
ACTN1-207ENST00000553290 SNX19Q92543 992 aa13.32□□□□□ -0.28
ACTN1-207ENST00000553290 PTPRN2Q92932 1015 aa13.32□□□□□ -0.28
ACTN1-207ENST00000553290 MUC3BQ9H195 1237 aa13.32□□□□□ -0.28
ACTN1-207ENST00000553290 FBXL12Q9NXK8 326 aa13.32□□□□□ -0.28
ACTN1-207ENST00000553290 VPS28Q9UK41 221 aa13.32□□□□□ -0.28
ACTN1-207ENST00000553290 FZD4Q9ULV1 537 aa13.32□□□□□ -0.28
ACTN1-207ENST00000553290 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.32□□□□□ -0.28
ACTN1-207ENST00000553290 OR51B4Q9Y5P0 310 aa13.32□□□□□ -0.28
ACTN1-207ENST00000553290 NYNRINQ9P2P1 1898 aaKnown RBP13.31□□□□□ -0.28
ACTN1-207ENST00000553290 IGLV3-10A0A075B6K4 115 aa13.31□□□□□ -0.28
ACTN1-207ENST00000553290 E9PAM4 449 aa13.31□□□□□ -0.28
ACTN1-207ENST00000553290 I6L893 689 aaPredicted RBP13.31□□□□□ -0.28
ACTN1-207ENST00000553290 MID1O15344 667 aa13.31□□□□□ -0.28
ACTN1-207ENST00000553290 ATP9BO43861 1147 aa13.31□□□□□ -0.28
ACTN1-207ENST00000553290 CNTN5O94779 1100 aa13.31□□□□□ -0.28
ACTN1-207ENST00000553290 ADH1BP00325 375 aa13.31□□□□□ -0.28
ACTN1-207ENST00000553290 RHOCP08134 193 aa13.31□□□□□ -0.28
ACTN1-207ENST00000553290 ATP1A3P13637 1013 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms