RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 MAGEC1O60732 1142 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 SIN3BO75182 1162 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 LUC7L3O95232 432 aaKnown RBP8.99□□□□□ -0.97
TMEM116-217ENST00000552801 FGFR1OPO95684 399 aaKnown RBP8.99□□□□□ -0.97
TMEM116-217ENST00000552801 LDOC1O95751 146 aaPredicted RBP8.99□□□□□ -0.97
TMEM116-217ENST00000552801 IL1BP01584 269 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 SRPRAP08240 638 aaKnown RBP8.99□□□□□ -0.97
TMEM116-217ENST00000552801 TBC1D3HP0C7X1 549 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 ZNF18P17022 549 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 BRD2P25440 801 aaKnown RBP8.99□□□□□ -0.97
TMEM116-217ENST00000552801 CD38P28907 300 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 SLC8A1P32418 973 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 SLC19A1P41440 591 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 MMP16P51512 607 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 OXCT1P55809 520 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 SNX16P57768 344 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 ECT2LQ008S8 904 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 SULT2A1Q06520 285 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 CYP4F3Q08477 520 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 PTPRNQ16849 979 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 HNRNPA1L2Q32P51 320 aaKnown RBP8.99□□□□□ -0.97
TMEM116-217ENST00000552801 ACCSLQ4AC99 568 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 TBC1D3GQ6DHY5 549 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 TBC1D3CQ6IPX1 549 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 PMF1Q6P1K2 205 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 NCEH1Q6PIU2 408 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 DHRS13Q6UX07 377 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 LAYNQ6UX15 382 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 PRPF39Q86UA1 669 aaKnown RBP8.99□□□□□ -0.97
TMEM116-217ENST00000552801 CREBRFQ8IUR6 639 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 TBC1D3Q8IZP1 549 aaPredicted RBP8.99□□□□□ -0.97
TMEM116-217ENST00000552801 LGI2Q8N0V4 545 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 CFAP52Q8N1V2 620 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 OXR1Q8N573 874 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 ATP6V0D2Q8N8Y2 350 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 OR2T34Q8NGX1 318 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 UBE2Q2Q8WVN8 375 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 NXPE2Q96DL1 559 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 DHTKD1Q96HY7 919 aaPredicted RBP8.99□□□□□ -0.97
TMEM116-217ENST00000552801 SERAC1Q96JX3 654 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 CNDP2Q96KP4 475 aaKnown RBP8.99□□□□□ -0.97
TMEM116-217ENST00000552801 CEP63Q96MT8 703 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 SLC6A18Q96N87 628 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 MED15Q96RN5 788 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 RSPH9Q9H1X1 276 aaPredicted RBP8.99□□□□□ -0.97
TMEM116-217ENST00000552801 FAM204AQ9H8W3 233 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 SLC25A13Q9UJS0 675 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 FZD4Q9ULV1 537 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 ERVW-1Q9UQF0 538 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 TLR6Q9Y2C9 796 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 GPSM3Q9Y4H4 160 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 AK5Q9Y6K8 562 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 FRYQ5TBA9 3013 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 TP53BP1Q12888 1972 aaPredicted RBP8.99□□□□□ -0.97
TMEM116-217ENST00000552801 IGF2RP11717 2491 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 FAM149AA5PLN7 773 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 TRIM49BA6NDI0 452 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 E9PAM4 449 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 TAF4O00268 1085 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 ENC1O14682 589 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 VILLO15195 856 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 RRP8O43159 456 aaKnown RBP8.99□□□□□ -0.97
TMEM116-217ENST00000552801 GNA14O95837 355 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 SLC2A3P11169 496 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 C5AR1P21730 350 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 SLC6A4P31645 630 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 USP8P40818 1118 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 CTSKP43235 329 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 ABCG1P45844 678 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 SGSHP51688 502 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 GALCP54803 685 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 RPS24P62847 133 aaKnown RBP8.99□□□□□ -0.97
TMEM116-217ENST00000552801 BNC1Q01954 994 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 CCDC15Q0P6D6 951 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 NNTQ13423 1086 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 NUMA1Q14980 2115 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 TUSC1Q2TAM9 212 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 MS4A13Q5J8X5 152 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 PITRM1Q5JRX3 1037 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 RABGAP1LQ5R372 815 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 FAM46CQ5VWP2 391 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 ISM2Q6H9L7 571 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 RRAGAQ7L523 313 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 TMPRSS12Q86WS5 348 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 KDM1BQ8NB78 822 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 RNF214Q8ND24 703 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 PRR7Q8TB68 274 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 ADAM32Q8TC27 787 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 DQX1Q8TE96 717 aaKnown RBP8.99□□□□□ -0.97
TMEM116-217ENST00000552801 SLC35F5Q8WV83 523 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 SLC35C1Q96A29 364 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 TTC17Q96AE7 1141 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 P2RY11Q96G91 374 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 NOX5Q96PH1 765 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 ELF4Q99607 663 aaPredicted RBP8.99□□□□□ -0.97
TMEM116-217ENST00000552801 NEUROG2Q9H2A3 272 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 SPTLC3Q9NUV7 552 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 BTBD3Q9Y2F9 522 aa8.99□□□□□ -0.97
TMEM116-217ENST00000552801 FCF1Q9Y324 198 aaKnown RBP8.99□□□□□ -0.97
TMEM116-217ENST00000552801 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms