RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 FAM133BQ5BKY9 247 aaKnown RBP13.01□□□□□ -0.33
CACNB3-223ENST00000552480 UBAP2Q5T6F2 1119 aaKnown RBP13.01□□□□□ -0.33
CACNB3-223ENST00000552480 ITPRIPL1Q6GPH6 555 aa13.01□□□□□ -0.33
CACNB3-223ENST00000552480 FAM109BQ6ICB4 259 aaPredicted RBP13.01□□□□□ -0.33
CACNB3-223ENST00000552480 TIGD7Q6NT04 549 aaPredicted RBP13.01□□□□□ -0.33
CACNB3-223ENST00000552480 SPRED2Q7Z698 418 aa13.01□□□□□ -0.33
CACNB3-223ENST00000552480 CROCCP2Q86T23 111 aa13.01□□□□□ -0.33
CACNB3-223ENST00000552480 HS6ST3Q8IZP7 471 aa13.01□□□□□ -0.33
CACNB3-223ENST00000552480 LGI2Q8N0V4 545 aa13.01□□□□□ -0.33
CACNB3-223ENST00000552480 MICAL1Q8TDZ2 1067 aa13.01□□□□□ -0.33
CACNB3-223ENST00000552480 DEPDC1BQ8WUY9 529 aa13.01□□□□□ -0.33
CACNB3-223ENST00000552480 MRPS31Q92665 395 aaKnown RBP13.01□□□□□ -0.33
CACNB3-223ENST00000552480 ZFRQ96KR1 1074 aaKnown RBP13.01□□□□□ -0.33
CACNB3-223ENST00000552480 GCNAQ96QF7 691 aa13.01□□□□□ -0.33
CACNB3-223ENST00000552480 DDX50Q9BQ39 737 aaKnown RBP13.01□□□□□ -0.33
CACNB3-223ENST00000552480 NOL6Q9H6R4 1146 aaKnown RBP13.01□□□□□ -0.33
CACNB3-223ENST00000552480 TMBIM4Q9HC24 238 aa13.01□□□□□ -0.33
CACNB3-223ENST00000552480 NDFIP2Q9NV92 336 aa13.01□□□□□ -0.33
CACNB3-223ENST00000552480 ZNF212Q9UDV6 495 aa13.01□□□□□ -0.33
CACNB3-223ENST00000552480 ANAPC1Q9H1A4 1944 aa13.01□□□□□ -0.33
CACNB3-223ENST00000552480 GBF1Q92538 1859 aa13□□□□□ -0.33
CACNB3-223ENST00000552480 ARHGAP42A6NI28 874 aa13□□□□□ -0.33
CACNB3-223ENST00000552480 E7EVH7 732 aa13□□□□□ -0.33
CACNB3-223ENST00000552480 MATN3O15232 486 aa13□□□□□ -0.33
CACNB3-223ENST00000552480 MAFKO60675 156 aa13□□□□□ -0.33
CACNB3-223ENST00000552480 CLASP2O75122 1294 aaKnown RBP13□□□□□ -0.33
CACNB3-223ENST00000552480 CSPG5O95196 566 aa13□□□□□ -0.33
CACNB3-223ENST00000552480 APRTP07741 180 aa13□□□□□ -0.33
CACNB3-223ENST00000552480 MYZAPP0CAP1 466 aa13□□□□□ -0.33
CACNB3-223ENST00000552480 IRF1P10914 325 aa13□□□□□ -0.33
CACNB3-223ENST00000552480 TSHRP16473 764 aa13□□□□□ -0.33
CACNB3-223ENST00000552480 PSMB4P28070 264 aa13□□□□□ -0.33
CACNB3-223ENST00000552480 HOXA9P31269 272 aa13□□□□□ -0.33
CACNB3-223ENST00000552480 SLC6A4P31645 630 aa13□□□□□ -0.33
CACNB3-223ENST00000552480 IRS1P35568 1242 aa13□□□□□ -0.33
CACNB3-223ENST00000552480 PAPOLAP51003 745 aaKnown RBP13□□□□□ -0.33
CACNB3-223ENST00000552480 CYP4F8P98187 520 aa13□□□□□ -0.33
CACNB3-223ENST00000552480 ZBTB17Q13105 803 aa13□□□□□ -0.33
CACNB3-223ENST00000552480 CAMK1Q14012 370 aa13□□□□□ -0.33
CACNB3-223ENST00000552480 KRT71Q3SY84 523 aa13□□□□□ -0.33
CACNB3-223ENST00000552480 BBS9Q3SYG4 887 aa13□□□□□ -0.33
CACNB3-223ENST00000552480 MSS51Q4VC12 460 aa13□□□□□ -0.33
CACNB3-223ENST00000552480 TEX44Q53QW1 395 aa13□□□□□ -0.33
CACNB3-223ENST00000552480 TTMPQ5BVD1 217 aa13□□□□□ -0.33
CACNB3-223ENST00000552480 DNAJC21Q5F1R6 531 aaKnown RBP13□□□□□ -0.33
CACNB3-223ENST00000552480 RABGAP1LQ5R372 815 aa13□□□□□ -0.33
CACNB3-223ENST00000552480 FAM182AQ5T1J6 154 aa13□□□□□ -0.33
CACNB3-223ENST00000552480 TXNDC8Q6A555 127 aa13□□□□□ -0.33
CACNB3-223ENST00000552480 ARHGAP36Q6ZRI8 547 aa13□□□□□ -0.33
CACNB3-223ENST00000552480 GAREM2Q75VX8 874 aa13□□□□□ -0.33
CACNB3-223ENST00000552480 PID1Q7Z2X4 250 aa13□□□□□ -0.33
CACNB3-223ENST00000552480 TFAP2DQ7Z6R9 452 aa13□□□□□ -0.33
CACNB3-223ENST00000552480 DENND1CQ8IV53 801 aa13□□□□□ -0.33
CACNB3-223ENST00000552480 ZBED8Q8IZ13 594 aa13□□□□□ -0.33
CACNB3-223ENST00000552480 FATE1Q969F0 183 aa13□□□□□ -0.33
CACNB3-223ENST00000552480 ARL8AQ96BM9 186 aa13□□□□□ -0.33
CACNB3-223ENST00000552480 C9orf72Q96LT7 481 aa13□□□□□ -0.33
CACNB3-223ENST00000552480 SERPINB12Q96P63 405 aa13□□□□□ -0.33
CACNB3-223ENST00000552480 CEP41Q9BYV8 373 aa13□□□□□ -0.33
CACNB3-223ENST00000552480 GBA3Q9H227 469 aa13□□□□□ -0.33
CACNB3-223ENST00000552480 XAB2Q9HCS7 855 aaKnown RBP13□□□□□ -0.33
CACNB3-223ENST00000552480 MAN1C1Q9NR34 630 aa13□□□□□ -0.33
CACNB3-223ENST00000552480 ASAH2Q9NR71 780 aa13□□□□□ -0.33
CACNB3-223ENST00000552480 GKN1Q9NS71 199 aa13□□□□□ -0.33
CACNB3-223ENST00000552480 STOML2Q9UJZ1 356 aa13□□□□□ -0.33
CACNB3-223ENST00000552480 A0A087WUV0 522 aaPredicted RBP12.99□□□□□ -0.33
CACNB3-223ENST00000552480 RASA4BC9J798 803 aa12.99□□□□□ -0.33
CACNB3-223ENST00000552480 H3BNC9 293 aa12.99□□□□□ -0.33
CACNB3-223ENST00000552480 CCL16O15467 120 aa12.99□□□□□ -0.33
CACNB3-223ENST00000552480 RASA4O43374 803 aa12.99□□□□□ -0.33
CACNB3-223ENST00000552480 KLKB1P03952 638 aa12.99□□□□□ -0.33
CACNB3-223ENST00000552480 HNRNPA1P09651 372 aaKnown RBP eCLIP12.99□□□□□ -0.33
CACNB3-223ENST00000552480 CCNB1P14635 433 aa12.99□□□□□ -0.33
CACNB3-223ENST00000552480 LMAN1P49257 510 aa12.99□□□□□ -0.33
CACNB3-223ENST00000552480 EPHA5P54756 1037 aa12.99□□□□□ -0.33
CACNB3-223ENST00000552480 CDH4P55283 916 aa12.99□□□□□ -0.33
CACNB3-223ENST00000552480 YBEYP58557 167 aaPredicted RBP12.99□□□□□ -0.33
CACNB3-223ENST00000552480 SARNPP82979 210 aaKnown RBP12.99□□□□□ -0.33
CACNB3-223ENST00000552480 GPM6BQ13491 265 aa12.99□□□□□ -0.33
CACNB3-223ENST00000552480 FASTKD3Q14CZ7 662 aaKnown RBP12.99□□□□□ -0.33
CACNB3-223ENST00000552480 ANO4Q32M45 955 aa12.99□□□□□ -0.33
CACNB3-223ENST00000552480 PARP15Q460N3 678 aa12.99□□□□□ -0.33
CACNB3-223ENST00000552480 CCDC38Q502W7 563 aa12.99□□□□□ -0.33
CACNB3-223ENST00000552480 SYCP2LQ5T4T6 812 aa12.99□□□□□ -0.33
CACNB3-223ENST00000552480 AGBL2Q5U5Z8 902 aa12.99□□□□□ -0.33
CACNB3-223ENST00000552480 CIR1Q86X95 450 aaPredicted RBP12.99□□□□□ -0.33
CACNB3-223ENST00000552480 ARL14EPQ8N8R7 260 aaPredicted RBP12.99□□□□□ -0.33
CACNB3-223ENST00000552480 ATP11CQ8NB49 1132 aa12.99□□□□□ -0.33
CACNB3-223ENST00000552480 UHMK1Q8TAS1 419 aaKnown RBP12.99□□□□□ -0.33
CACNB3-223ENST00000552480 ZSCAN18Q8TBC5 510 aaPredicted RBP12.99□□□□□ -0.33
CACNB3-223ENST00000552480 PYROXD1Q8WU10 500 aa12.99□□□□□ -0.33
CACNB3-223ENST00000552480 SLC22A17Q8WUG5 538 aa12.99□□□□□ -0.33
CACNB3-223ENST00000552480 MYEOVQ96EZ4 313 aa12.99□□□□□ -0.33
CACNB3-223ENST00000552480 TEKT5Q96M29 485 aa12.99□□□□□ -0.33
CACNB3-223ENST00000552480 SLC22A12Q96S37 553 aa12.99□□□□□ -0.33
CACNB3-223ENST00000552480 IL12RB2Q99665 862 aa12.99□□□□□ -0.33
CACNB3-223ENST00000552480 CORO1BQ9BR76 489 aa12.99□□□□□ -0.33
CACNB3-223ENST00000552480 ROPN1BQ9BZX4 212 aaPredicted RBP12.99□□□□□ -0.33
CACNB3-223ENST00000552480 ROPN1Q9HAT0 212 aaPredicted RBP12.99□□□□□ -0.33
CACNB3-223ENST00000552480 RSPH14Q9UHP6 348 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms